📄 smoothwavelet.m
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function swave=smoothwavelet(wave,dt,period,dj,scale)
% Smoothing as in the appendix of Torrence and Webster "Inter decadal changes in the ENSO-Monsoon System" 1998
%
% used in wavelet coherence calculations
%
%
% Only applicable for the Morlet wavelet.
%
% (C) Aslak Grinsted 2002-2005
%
% -------------------------------------------------------------------------
% Copyright (C) 2002-2005, Aslak Grinsted
% This software may be used, copied, or redistributed as long as it is not
% sold and this copyright notice is reproduced on each copy made. This
% routine is provided as is without any express or implied warranties
% whatsoever.
% TODO: take mother argument
%
n=size(wave,2);
%swave=zeros(size(wave));
twave=zeros(size(wave));
% %filter in time:....
% for i=1:size(wave,1)
% sc=period(i)/dt; % time/cycle / time/sample = samples/cycle
% t=(-round(sc*3):round(sc*3))*dt;
% f=exp(-t.^2/(2*scale(i)^2));
% f=f/sum(f); %filter must have unit weight
%
% smooth=conv(wave(i,:),f); %slowest line of code in the wtcsig calculation. should be done like in wavelet with fft and ifft.
% cutlen=(length(t)-1)*.5;
% twave(i,:)=smooth((cutlen+1):(end-cutlen)); %remove paddings
% end
%filter in time:....
%zero-pad to power of 2... Speeds up fft calcs if n is large
npad=2.^ceil(log2(n));
k = 1:fix(npad/2);
k = k.*((2.*pi)/npad);
k = [0., k, -k(fix((npad-1)/2):-1:1)];
k2=k.^2;
for ii=1:size(wave,1)
F=exp(-.5*(scale(ii)^2)*k2); %Thanks to Bing Si for finding a bug here.
smooth=ifft(F.*fft(wave(ii,:),npad));
twave(ii,:)=smooth(1:n);
end
if isreal(wave)
twave=real(twave); %-------hack-----------
end
%scale smoothing (boxcar with width of .6)
%
% TODO: optimize. Because this is done many times in the monte carlo run.
%
dj0=0.6;
dj0steps=dj0/(dj*2);
% for ii=1:size(twave,1)
% number=0;
% for l=1:size(twave,1);
% if ((abs(ii-l)+.5)<=dj0steps)
% number=number+1;
% swave(ii,:)=swave(ii,:)+twave(l,:);
% elseif ((abs(ii-l)+.5)<=(dj0steps+1))
% fraction=mod(dj0steps,1);
% number=number+fraction;
% swave(ii,:)=swave(ii,:)+twave(l,:)*fraction;
% end
% end
% swave(ii,:)=swave(ii,:)/number;
% end
kernel=[mod(dj0steps,1); ones(2 * round(dj0steps)-1,1); ...
mod(dj0steps,1)]./(2*round(dj0steps)-1+2*mod(dj0steps,1));
swave=conv2(twave,kernel,'same'); %thanks for optimization by Uwe Graichen
%swave=twave;
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