csvsaver.java

矩阵的QR分解算法

/*
 *    This program is free software; you can redistribute it and/or modify
 *    it under the terms of the GNU General Public License as published by
 *    the Free Software Foundation; either version 2 of the License, or
 *    (at your option) any later version.
 *
 *    This program is distributed in the hope that it will be useful,
 *    but WITHOUT ANY WARRANTY; without even the implied warranty of
 *    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 *    GNU General Public License for more details.
 *
 *    You should have received a copy of the GNU General Public License
 *    along with this program; if not, write to the Free Software
 *    Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
 */

/*
 *    CSVSaver.java
 *    Copyright (C) 2004 University of Waikato, Hamilton, New Zealand
 *
 */

package weka.core.converters;

import weka.core.Capabilities;
import weka.core.Instance;
import weka.core.Instances;
import weka.core.SparseInstance;
import weka.core.Capabilities.Capability;

import java.io.IOException;
import java.io.PrintWriter;

/**
 <!-- globalinfo-start -->
 * Writes to a destination that is in csv format
 * <p/>
 <!-- globalinfo-end -->
 *
 <!-- options-start -->
 * Valid options are: <p/>
 * 
 * <pre> -i &lt;the input file&gt;
 * The input file</pre>
 * 
 * <pre> -o &lt;the output file&gt;
 * The output file</pre>
 * 
 <!-- options-end -->
 *
 * @author Stefan Mutter ([e-mail])
 * @version $Revision: 1.8 $
 * @see Saver
 */
public class CSVSaver 
  extends AbstractFileSaver 
  implements BatchConverter, IncrementalConverter, FileSourcedConverter {

  /** for serialization */
  static final long serialVersionUID = 476636654410701807L;
  
  /** Constructor */  
  public CSVSaver(){
  
      resetOptions();
  }
   
  /**
   * Returns a string describing this Saver
   * @return a description of the Saver suitable for
   * displaying in the explorer/experimenter gui
   */
  public String globalInfo() {
    return "Writes to a destination that is in csv format";
  }

  
  /**
   * Returns a description of the file type.
   *
   * @return a short file description
   */
  public String getFileDescription() {
    return "CSV file: comma separated files";
  }

  /**
   * Resets the Saver 
   */
  public void resetOptions() {

    super.resetOptions();
    setFileExtension(".csv");
  }

  /** 
   * Returns the Capabilities of this saver.
   *
   * @return            the capabilities of this object
   * @see               Capabilities
   */
  public Capabilities getCapabilities() {
    Capabilities result = super.getCapabilities();
    
    // attributes
    result.enable(Capability.NOMINAL_ATTRIBUTES);
    result.enable(Capability.NUMERIC_ATTRIBUTES);
    result.enable(Capability.DATE_ATTRIBUTES);
    result.enable(Capability.STRING_ATTRIBUTES);
    result.enable(Capability.MISSING_VALUES);
    
    // class
    result.enable(Capability.NOMINAL_CLASS);
    result.enable(Capability.NUMERIC_CLASS);
    result.enable(Capability.DATE_CLASS);
    result.enable(Capability.STRING_CLASS);
    result.enable(Capability.MISSING_CLASS_VALUES);
    result.enable(Capability.NO_CLASS);
    
    return result;
  }

  /** Saves an instances incrementally. Structure has to be set by using the
   * setStructure() method or setInstances() method.
   * @param inst the instance to save
   * @throws IOException throws IOEXception if an instance cannot be saved incrementally.
   */  
  public void writeIncremental(Instance inst) throws IOException{
  
      int writeMode = getWriteMode();
      Instances structure = getInstances();
      PrintWriter outW = null;
      
      if(getRetrieval() == BATCH || getRetrieval() == NONE)
          throw new IOException("Batch and incremental saving cannot be mixed.");
      if(getWriter() != null)
          outW = new PrintWriter(getWriter());
          
      if(writeMode == WAIT){
        if(structure == null){
            setWriteMode(CANCEL);
            if(inst != null)
                System.err.println("Structure(Header Information) has to be set in advance");
        }
        else
            setWriteMode(STRUCTURE_READY);
        writeMode = getWriteMode();
      }
      if(writeMode == CANCEL){
          if(outW != null)
              outW.close();
          cancel();
      }
      if(writeMode == STRUCTURE_READY){
          setWriteMode(WRITE);
          //write header
          if(retrieveFile() == null || outW == null){
              // print out attribute names as first row
              for (int i = 0; i < structure.numAttributes(); i++) {
                System.out.print(structure.attribute(i).name());
                if (i < structure.numAttributes()-1) {
                    System.out.print(",");
                } else {
                    System.out.println();
                }
              } 
          }
          else{
              for (int i = 0; i < structure.numAttributes(); i++) {
                outW.print(structure.attribute(i).name());
                if (i < structure.numAttributes()-1) {
                    outW.print(",");
                } else {
                    outW.println();
                }
              }
              outW.flush();
          }
          writeMode = getWriteMode();
      }
      if(writeMode == WRITE){
          if(structure == null)
              throw new IOException("No instances information available.");
          if(inst != null){
          //write instance 
              if(retrieveFile() == null || outW == null)
                System.out.println(inst);
              else{
                outW.println(instanceToString(inst));
                //flushes every 100 instances
                m_incrementalCounter++;
                if(m_incrementalCounter > 100){
                    m_incrementalCounter = 0;
                    outW.flush();
                }
              }
          }
          else{
          //close
              if(outW != null){
                outW.flush();
                outW.close();
              }
              m_incrementalCounter = 0;
              resetStructure();
              outW = null;
              resetWriter();
          }
      }
  }  

  /** Writes a Batch of instances
   * @throws IOException throws IOException if saving in batch mode is not possible
   */
  public void writeBatch() throws IOException {
  
      if(getInstances() == null)
          throw new IOException("No instances to save");
      if(getRetrieval() == INCREMENTAL)
          throw new IOException("Batch and incremental saving cannot be mixed.");
      setRetrieval(BATCH);
      setWriteMode(WRITE);
      if(retrieveFile() == null && getWriter() == null){
          // print out attribute names as first row
          for (int i = 0; i < getInstances().numAttributes(); i++) {
            System.out.print(getInstances().attribute(i).name());
            if (i < getInstances().numAttributes()-1) {
                System.out.print(",");
            } else {
            System.out.println();
            }
        }
        for (int i = 0; i < getInstances().numInstances(); i++) {
            System.out.println(getInstances().instance(i));
        }
        setWriteMode(WAIT);
        return;
      }
      PrintWriter outW = new PrintWriter(getWriter());
      // print out attribute names as first row
      for (int i = 0; i < getInstances().numAttributes(); i++) {
	outW.print(getInstances().attribute(i).name());
	if (i < getInstances().numAttributes()-1) {
	  outW.print(",");
	} else {
	  outW.println();
	}
      }
      for (int i = 0; i < getInstances().numInstances(); i++) {
	outW.println(instanceToString((getInstances().instance(i))));
      }
      outW.flush();
      outW.close();
      setWriteMode(WAIT);
      outW = null;
      resetWriter();
      setWriteMode(CANCEL);
  }

  /**
   * turns an instance into a string. takes care of sparse instances as well.
   *
   * @param inst the instance to turn into a string
   */
  protected String instanceToString(Instance inst) {
    Instance outInst;

    if (inst instanceof SparseInstance) {
      outInst = new Instance(inst.weight(), inst.toDoubleArray());
      outInst.setDataset(inst.dataset());
    }
    else {
      outInst = inst;
    }

    return outInst.toString();
  }

  /**
   * Main method.
   *
   * @param args should contain the options of a Saver.
   */
  public static void main(String[] args) {
    runFileSaver(new CSVSaver(), args);
  }
}