configure

hmmer源程序

char htonl();

int main() {
htonl()
; return 0; }
EOF
if { (eval echo configure:1310: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest${ac_exeext}; then
  rm -rf conftest*
  eval "ac_cv_lib_$ac_lib_var=yes"
else
  echo "configure: failed program was:" >&5
  cat conftest.$ac_ext >&5
  rm -rf conftest*
  eval "ac_cv_lib_$ac_lib_var=no"
fi
rm -f conftest*
LIBS="$ac_save_LIBS"

fi
if eval "test \"`echo '$ac_cv_lib_'$ac_lib_var`\" = yes"; then
  echo "$ac_t""yes" 1>&6
    ac_tr_lib=HAVE_LIB`echo socket | sed -e 's/^a-zA-Z0-9_/_/g' \
    -e 'y/abcdefghijklmnopqrstuvwxyz/ABCDEFGHIJKLMNOPQRSTUVWXYZ/'`
  cat >> confdefs.h <<EOF
#define $ac_tr_lib 1
EOF

  LIBS="-lsocket $LIBS"

else
  echo "$ac_t""no" 1>&6
fi

fi
done

echo $ac_n "checking size of unsigned short""... $ac_c" 1>&6
echo "configure:1341: checking size of unsigned short" >&5
if eval "test \"`echo '$''{'ac_cv_sizeof_unsigned_short'+set}'`\" = set"; then
  echo $ac_n "(cached) $ac_c" 1>&6
else
  if test "$cross_compiling" = yes; then
  ac_cv_sizeof_unsigned_short=2
else
  cat > conftest.$ac_ext <<EOF
#line 1349 "configure"
#include "confdefs.h"
#include <stdio.h>
main()
{
  FILE *f=fopen("conftestval", "w");
  if (!f) exit(1);
  fprintf(f, "%d\n", sizeof(unsigned short));
  exit(0);
}
EOF
if { (eval echo configure:1360: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest${ac_exeext} && (./conftest; exit) 2>/dev/null
then
  ac_cv_sizeof_unsigned_short=`cat conftestval`
else
  echo "configure: failed program was:" >&5
  cat conftest.$ac_ext >&5
  rm -fr conftest*
  ac_cv_sizeof_unsigned_short=0
fi
rm -fr conftest*
fi

fi
echo "$ac_t""$ac_cv_sizeof_unsigned_short" 1>&6
cat >> confdefs.h <<EOF
#define SIZEOF_UNSIGNED_SHORT $ac_cv_sizeof_unsigned_short
EOF


echo $ac_n "checking size of unsigned int""... $ac_c" 1>&6
echo "configure:1380: checking size of unsigned int" >&5
if eval "test \"`echo '$''{'ac_cv_sizeof_unsigned_int'+set}'`\" = set"; then
  echo $ac_n "(cached) $ac_c" 1>&6
else
  if test "$cross_compiling" = yes; then
  ac_cv_sizeof_unsigned_int=4
else
  cat > conftest.$ac_ext <<EOF
#line 1388 "configure"
#include "confdefs.h"
#include <stdio.h>
main()
{
  FILE *f=fopen("conftestval", "w");
  if (!f) exit(1);
  fprintf(f, "%d\n", sizeof(unsigned int));
  exit(0);
}
EOF
if { (eval echo configure:1399: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest${ac_exeext} && (./conftest; exit) 2>/dev/null
then
  ac_cv_sizeof_unsigned_int=`cat conftestval`
else
  echo "configure: failed program was:" >&5
  cat conftest.$ac_ext >&5
  rm -fr conftest*
  ac_cv_sizeof_unsigned_int=0
fi
rm -fr conftest*
fi

fi
echo "$ac_t""$ac_cv_sizeof_unsigned_int" 1>&6
cat >> confdefs.h <<EOF
#define SIZEOF_UNSIGNED_INT $ac_cv_sizeof_unsigned_int
EOF


echo $ac_n "checking size of unsigned long""... $ac_c" 1>&6
echo "configure:1419: checking size of unsigned long" >&5
if eval "test \"`echo '$''{'ac_cv_sizeof_unsigned_long'+set}'`\" = set"; then
  echo $ac_n "(cached) $ac_c" 1>&6
else
  if test "$cross_compiling" = yes; then
  ac_cv_sizeof_unsigned_long=4
else
  cat > conftest.$ac_ext <<EOF
#line 1427 "configure"
#include "confdefs.h"
#include <stdio.h>
main()
{
  FILE *f=fopen("conftestval", "w");
  if (!f) exit(1);
  fprintf(f, "%d\n", sizeof(unsigned long));
  exit(0);
}
EOF
if { (eval echo configure:1438: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest${ac_exeext} && (./conftest; exit) 2>/dev/null
then
  ac_cv_sizeof_unsigned_long=`cat conftestval`
else
  echo "configure: failed program was:" >&5
  cat conftest.$ac_ext >&5
  rm -fr conftest*
  ac_cv_sizeof_unsigned_long=0
fi
rm -fr conftest*
fi

fi
echo "$ac_t""$ac_cv_sizeof_unsigned_long" 1>&6
cat >> confdefs.h <<EOF
#define SIZEOF_UNSIGNED_LONG $ac_cv_sizeof_unsigned_long
EOF


echo $ac_n "checking size of unsigned long long""... $ac_c" 1>&6
echo "configure:1458: checking size of unsigned long long" >&5
if eval "test \"`echo '$''{'ac_cv_sizeof_unsigned_long_long'+set}'`\" = set"; then
  echo $ac_n "(cached) $ac_c" 1>&6
else
  if test "$cross_compiling" = yes; then
  ac_cv_sizeof_unsigned_long_long=8
else
  cat > conftest.$ac_ext <<EOF
#line 1466 "configure"
#include "confdefs.h"
#include <stdio.h>
main()
{
  FILE *f=fopen("conftestval", "w");
  if (!f) exit(1);
  fprintf(f, "%d\n", sizeof(unsigned long long));
  exit(0);
}
EOF
if { (eval echo configure:1477: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest${ac_exeext} && (./conftest; exit) 2>/dev/null
then
  ac_cv_sizeof_unsigned_long_long=`cat conftestval`
else
  echo "configure: failed program was:" >&5
  cat conftest.$ac_ext >&5
  rm -fr conftest*
  ac_cv_sizeof_unsigned_long_long=0
fi
rm -fr conftest*
fi

fi
echo "$ac_t""$ac_cv_sizeof_unsigned_long_long" 1>&6
cat >> confdefs.h <<EOF
#define SIZEOF_UNSIGNED_LONG_LONG $ac_cv_sizeof_unsigned_long_long
EOF


if test "$ac_cv_sizeof_unsigned_short" = "2"; then
  SQD_UINT16="unsigned short    "
else
  SQD_UINT16="FIXME"
  echo "configure: warning: " 1>&2 "No 16-bit int? Manually edit config file to typedef sqd_uint16."
fi
if test "$ac_cv_sizeof_unsigned_int" = "4"; then
  SQD_UINT32="unsigned int      "
elif test "$ac_cv_sizeof_unsigned_long" = "4"; then
  SQD_UINT32="unsigned long     "
else
  SQD_UINT32="FIXME"
  echo "configure: warning: " 1>&2 "No 32-bit int? Manually edit config file to typedef sqd_uint32."
fi
if test "$ac_cv_sizeof_unsigned_long" = "8"; then
  SQD_UINT64="unsigned long     "
elif test "$ac_cv_sizeof_unsigned_long_long" = "8"; then
  SQD_UINT64="unsigned long long"
else
  SQD_UINT64="FIXME"
  echo "configure: warning: " 1>&2 "No 64-bit int? Manually edit config file to typedef sqd_uint64."
fi







   echo $ac_n "checking whether fpos_t is an arithmetic datatype""... $ac_c" 1>&6
echo "configure:1526: checking whether fpos_t is an arithmetic datatype" >&5
   fpos_arithmetic="no."
   cat > conftest.$ac_ext <<EOF
#line 1529 "configure"
#include "confdefs.h"
#include <stdio.h>
int main() {
int main(void) { fpos_t f1, f2; if (f1 == f2) f1 = 0;}
; return 0; }
EOF
if { (eval echo configure:1536: \"$ac_compile\") 1>&5; (eval $ac_compile) 2>&5; }; then
  rm -rf conftest*
  cat >> confdefs.h <<\EOF
#define ARITHMETIC_FPOS_T 1
EOF
 
       fpos_arithmetic="yes."
else
  echo "configure: failed program was:" >&5
  cat conftest.$ac_ext >&5
fi
rm -f conftest*
   echo "$ac_t""$fpos_arithmetic" 1>&6


for ac_func in ftello fseeko
do
echo $ac_n "checking for $ac_func""... $ac_c" 1>&6
echo "configure:1554: checking for $ac_func" >&5
if eval "test \"`echo '$''{'ac_cv_func_$ac_func'+set}'`\" = set"; then
  echo $ac_n "(cached) $ac_c" 1>&6
else
  cat > conftest.$ac_ext <<EOF
#line 1559 "configure"
#include "confdefs.h"
/* System header to define __stub macros and hopefully few prototypes,
    which can conflict with char $ac_func(); below.  */
#include <assert.h>
/* Override any gcc2 internal prototype to avoid an error.  */
/* We use char because int might match the return type of a gcc2
    builtin and then its argument prototype would still apply.  */
char $ac_func();

int main() {

/* The GNU C library defines this for functions which it implements
    to always fail with ENOSYS.  Some functions are actually named
    something starting with __ and the normal name is an alias.  */
#if defined (__stub_$ac_func) || defined (__stub___$ac_func)
choke me
#else
$ac_func();
#endif

; return 0; }
EOF
if { (eval echo configure:1582: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest${ac_exeext}; then
  rm -rf conftest*
  eval "ac_cv_func_$ac_func=yes"
else
  echo "configure: failed program was:" >&5
  cat conftest.$ac_ext >&5
  rm -rf conftest*
  eval "ac_cv_func_$ac_func=no"
fi
rm -f conftest*
fi

if eval "test \"`echo '$ac_cv_func_'$ac_func`\" = yes"; then
  echo "$ac_t""yes" 1>&6
    ac_tr_func=HAVE_`echo $ac_func | tr 'abcdefghijklmnopqrstuvwxyz' 'ABCDEFGHIJKLMNOPQRSTUVWXYZ'`
  cat >> confdefs.h <<EOF
#define $ac_tr_func 1
EOF
 
else
  echo "$ac_t""no" 1>&6
fi
done

for ac_func in ftello64 fseeko64
do
echo $ac_n "checking for $ac_func""... $ac_c" 1>&6
echo "configure:1609: checking for $ac_func" >&5
if eval "test \"`echo '$''{'ac_cv_func_$ac_func'+set}'`\" = set"; then
  echo $ac_n "(cached) $ac_c" 1>&6
else
  cat > conftest.$ac_ext <<EOF
#line 1614 "configure"
#include "confdefs.h"
/* System header to define __stub macros and hopefully few prototypes,
    which can conflict with char $ac_func(); below.  */
#include <assert.h>
/* Override any gcc2 internal prototype to avoid an error.  */
/* We use char because int might match the return type of a gcc2
    builtin and then its argument prototype would still apply.  */
char $ac_func();

int main() {

/* The GNU C library defines this for functions which it implements
    to always fail with ENOSYS.  Some functions are actually named
    something starting with __ and the normal name is an alias.  */
#if defined (__stub_$ac_func) || defined (__stub___$ac_func)
choke me
#else
$ac_func();
#endif

; return 0; }
EOF
if { (eval echo configure:1637: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest${ac_exeext}; then
  rm -rf conftest*
  eval "ac_cv_func_$ac_func=yes"
else
  echo "configure: failed program was:" >&5
  cat conftest.$ac_ext >&5
  rm -rf conftest*
  eval "ac_cv_func_$ac_func=no"
fi
rm -f conftest*
fi

if eval "test \"`echo '$ac_cv_func_'$ac_func`\" = yes"; then
  echo "$ac_t""yes" 1>&6
    ac_tr_func=HAVE_`echo $ac_func | tr 'abcdefghijklmnopqrstuvwxyz' 'ABCDEFGHIJKLMNOPQRSTUVWXYZ'`
  cat >> confdefs.h <<EOF
#define $ac_tr_func 1
EOF
 
else
  echo "$ac_t""no" 1>&6
fi
done

for ac_func in ftell64 fseek64
do
echo $ac_n "checking for $ac_func""... $ac_c" 1>&6
echo "configure:1664: checking for $ac_func" >&5
if eval "test \"`echo '$''{'ac_cv_func_$ac_func'+set}'`\" = set"; then
  echo $ac_n "(cached) $ac_c" 1>&6
else
  cat > conftest.$ac_ext <<EOF
#line 1669 "configure"
#include "confdefs.h"
/* System header to define __stub macros and hopefully few prototypes,
    which can conflict with char $ac_func(); below.  */
#include <assert.h>
/* Override any gcc2 internal prototype to avoid an error.  */
/* We use char because int might match the return type of a gcc2
    builtin and then its argument prototype would still apply.  */
char $ac_func();

int main() {

/* The GNU C library defines this for functions which it implements
    to always fail with ENOSYS.  Some functions are actually named
    something starting with __ and the normal name is an alias.  */
#if defined (__stub_$ac_func) || defined (__stub___$ac_func)
choke me
#else
$ac_func();
#endif

; return 0; }
EOF
if { (eval echo configure:1692: \"$ac_link\") 1>&5; (eval $ac_link) 2>&5; } && test -s conftest${ac_exeext}; then
  rm -rf conftest*
  eval "ac_cv_func_$ac_func=yes"
else
  echo "configure: failed program was:" >&5
  cat conftest.$ac_ext >&5
  rm -rf conftest*
  eval "ac_cv_func_$ac_func=no"
fi
rm -f conftest*
fi

if eval "test \"`echo '$ac_cv_func_'$ac_func`\" = yes"; then
  echo "$ac_t""yes" 1>&6
    ac_tr_func=HAVE_`echo $ac_func | tr 'abcdefghijklmnopqrstuvwxyz' 'ABCDEFGHIJKLMNOPQRSTUVWXYZ'`
  cat >> confdefs.h <<EOF
#define $ac_tr_func 1
EOF
 
else
  echo "$ac_t""no" 1>&6
fi
done

echo $ac_n "checking for stat64""... $ac_c" 1>&6
echo "configure:1717: checking for stat64" >&5
if eval "test \"`echo '$''{'ac_cv_func_stat64'+set}'`\" = set"; then
  echo $ac_n "(cached) $ac_c" 1>&6
else
  cat > conftest.$ac_ext <<EOF
#line 1722 "configure"
#include "confdefs.h"
/* System header to define __stub macros and hopefully few prototypes,
    which can conflict with char stat64(); below.  */
#include <assert.h>
/* Override any gcc2 internal prototype to avoid an error.  */
/* We use char because int might match the return type of a gcc2
    builtin and then its argument prototype would still apply.  */
char stat64();

int main() {

/* The GNU C library defines this for functions which it implements
    to always fail with ENOSYS.  Some functions are actually named
    something starting with __ and the normal name is an alias.  */
#if defined (__stub_stat64) || defined (__stub___stat64)