a2m

hmmer源程序

>GLB2_MORMR 
...PIVD..SGSVSPLSDAEKNKIRAAW.DIVYKNYEKNGVDILVKFFTGTPAAQAFFPK
FKGLTTADALKKSSDVRWHAERIINAVNDAVKSMDDTEKMSMKLQELSVKHAQSFYVDRQ
YFKVLAGII.........ADTTAPGDAGFEKLMSMICILLSSAY.......
>GLBZ_CHITH 
MKFIILALCVAAASALSGDQIGLVQST.YGKVKG....DSVGILYAVFKADPTIQAAFPQ
FVGK.DLDAIKGGAEFSTHAGRIVGFLGGVIDDLP...NIGKHVDALVATH.KPRGVTHA
QFNNFRAAFIAYLKGHV..DYTAAVEAAWGATFDAFFGAVFAK.......M
>HBA2_BOSMU 
...V...........LSAADKGNVKAAW.GKVGGHAAEYGAEALERMFLSFPTTKTYFPH
FD.LSH.....GSAQVKGHGAKVAAALTKAVGHLDD...LPGALSELSDLHAHKLRVDPV
NFKLLSHSLLVTLASHLPSDFTPAVHASLDKFLANVSTVLTSKYR......
>HBA2_GALCR 
...V...........LSPTDKSNVKAAW.EKVGAHAGDYGAEALERMFLSFPTTKTYFPH
FD.LSH.....GSTQVKGHGKKVADALTNAVLHVDD...MPSALSALSDLHAHKLRVDPV
NFKLLRHCLLVTLACHHPAEFTPAVHASLDKFMASVSTVLTSKYR......
>HBA4_SALIR 
...S...........LSAKDKANVKAIW.GKILPKSDEIGEQALSRMLVVYPQTKAYFSH
WASVAP.....GSAPVKKHGITIMNQIDDCVGHMDD...LFGFLTKLSELHATKLRVDPT
NFKILAHNLIVVIAAYFPAEFTPEIHLSVDKFLQQLALALAEKYR......
>HBAD_CHLME 
...M...........LTADDKKLLTQLW.EKVAGHQEEFGSEALQRMFLTYPQTKTYFPH
FD.LHP.....GSEQVRGHGKKVAAALGNAVKSLDN...LSQALSELSNLHAYNLRVDPA
NFKLLAQCFQVVLATHLGKDYSPEMHAAFDKFLSAVAAVLAEKYR......
>HBAD_PASMO 
...M...........LTAEDKKLIQQIW.GKLGGAEEEIGADALWRMFHSYPSTKTYFPH
FD.LSQ.....GSDQIRGHGKKVVAALSNAIKNLDN...LSQALSELSNLHAYNLRVDPV
NFKFLSQCLQVSLATRLGKEYSPEVHSAVDKFMSAVASVLAEKYR......
>HBAZ_HORSE 
...S...........LTKAERTMVVSIW.GKISMQADAVGTEALQRLFSSYPQTKTYFPH
FD.LHE.....GSPQLRAHGSKVAAAVGDAVKSIDN...VAGALAKLSELHAYILRVDPV
NFKFLSHCLLVTLASRLPADFTADAHAAWDKFLSIVSSVLTEKYR......
>HBA_AILME 
...V...........LSPADKTNVKATW.DKIGGHAGEYGGEALERTFASFPTTKTYFPH
FD.LSP.....GSAQVKAHGKKVADALTTAVGHLDD...LPGALSALSDLHAHKLRVDPV
NFKLLSHCLLVTLASHHPAEFTPAVHASLDKFFSAVSTVLTSKYR......
>HBA_ANSSE 
...V...........LSAADKGNVKTVF.GKIGGHAEEYGAETLQRMFQTFPQTKTYFPH
FD.LQP.....GSAQIKAHGKKVAAALVEAANHIDD...IAGALSKLSDLHAQKLRVDPV
NFKFLGHCFLVVLAIHHPSLLTPEVHASMDKFLCAVATVLTAKYR......
>HBA_COLLI 
...V...........LSANDKSNVKAVF.AKIGGQAGDLGGEALERLFITYPQTKTYFPH
FD.LSH.....GSAQIKGHGKKVAEALVEAANHIDD...IAGALSKLSDLHAQKLRVDPV
NFKLLGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVLTAKYR......
>HBA_ERIEU 
...V...........LSATDKANVKTFW.GKLGGHGGEYGGEALDRMFQAHPTTKTYFPH
FD.LNP.....GSAQVKGHGKKVADALTTAVNNLDD...VPGALSALSDLHAHKLRVDPV
NFKLLSHCLLVTLALHHPADFTPAVHASLDKFLATVATVLTSKYR......
>HBA_FRAPO 
...V...........LSAADKNNVKGIF.GKISSHAEDYGAEALERMFITYPSTKTYFPH
FD.LSH.....GSAQVKGHGKKVVAALIEAANHIDD...IAGTLSKLSDLHAHKLRVDPV
NFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGNVLTAKYR......
>HBA_MACFA 
...V...........LSPADKTNVKAAW.GKVGGHAGEYGAEALERMFLSFPTTKTYFPH
FD.LSH.....GSAQVKGHGKKVADALTLAVGHVDD...MPQALSALSDLHAHKLRVDPV
NFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR......
>HBA_MACSI 
...V...........LSPADKTNVKDAW.GKVGGHAGEYGAEALERMFLSFPTTKTYFPH
FD.LSH.....GSAQVKGHGKKVADALTLAVGHVDD...MPQALSALSDLHAHKLRVDPV
NFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR......
>HBA_MESAU 
...V...........LSAKDKTNISEAW.GKIGGHAGEYGAEALERMFFVYPTTKTYFPH
FD.VSH.....GSAQVKGHGKKVADALTNAVGHLDD...LPGALSALSDLHAHKLRVDPV
NFKLLSHCLLVTLANHHPADFTPAVHASLDKFFASVSTVLTSKYR......
>HBA_PAGLA 
...V...........LSSADKNNIKATW.DKIGSHAGEYGAEALERTFISFPTTKTYFPH
FD.LSH.....GSAQVKAHGKKVADALTLAVGHLED...LPNALSALSDLHAYKLRVDPV
NFKLLSHCLLVTLACHHPAEFTPAVHSALDKFFSAVSTVLTSKYR......
>HBA_PHACO 
...V...........LSAADKNNVKGIF.TKIAGHAEEYGAEALERMFITYPSTKTYFPH
FD.LSH.....GSAQIKGHGKKVVAALIEAVNHIDD...ITGTLSKLSDLHAHKLRVDPV
NFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGTVLTAKYR......
>HBA_PONPY 
...V...........LSPADKTNVKTAW.GKVGAHAGDYGAEALERMFLSFPTTKTYFPH
FD.LSH.....GSAQVKDHGKKVADALTNAVAHVDD...MPNALSALSDLHAHKLRVDPV
NFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR......
>HBA_PROLO 
...V...........LSPADKANIKATW.DKIGGHAGEYGGEALERTFASFPTTKTYFPH
FD.LSP.....GSAQVKAHGKKVADALTLAVGHLDD...LPGALSALSDLHAYKLRVDPV
NFKLLSHCLLVTLACHHPAEFTPAVHASLDKFFTSVSTVLTSKYR......
>HBA_TRIOC 
...V...........LSANDKTNVKTVF.TKITGHAEDYGAETLERMFITYPPTKTYFPH
FD.LHH.....GSAQIKAHGKKVVGALIEAVNHIDD...IAGALSKLSDLHAQKLRVDPV
NFKLLGQCFLVVVAIHHPSVLTPEVHASLDKFLCAVGNVLSAKYR......
>HBB1_VAREX 
...V..........HWTAEEKQLICSLW.GKI..DVGLIGGETLAGLLVIYPWTQRQFSH
FGNLSSPTAIAGNPRVKAHGKKVLTSFGDAIKNLDN...IKDTFAKLSELHCDKLHVDPT
NFKLLGNVLVIVLADHHGKEFTPAHHAAYQKLVNVVSHSLARRYH......
>HBB2_TRICR 
...V..........HLTAEDRKEIAAIL.GKV..NVDSLGGQCLARLIVVNPWSRRYFHD
FGDLSSCDAICRNPKVLAHGAKVMRSIVEATKHLDN...LREYYADLSVTHSLKFYVDPE
NFKLFSGIVIVCLALTLQTDFSCHKQLAFEKLMKGVSHALGHGY.......
>HBB2_XENTR 
...V..........HWTAEEKATIASVW.GKV..DIEQDGHDALSRLLVVYPWTQRYFSS
FGNLSNVSAVSGNVKVKAHGNKVLSAVGSAIQHLDD...VKSHLKGLSKSHAEDLHVDPE
NFKRLADVLVIVLAAKLGSAFTPQVQAVWEKLNATLVAALSHGYF......
>HBBL_RANCA 
...V..........HWTAEEKAVINSVW.QKV..DVEQDGHEALTRLFIVYPWTQRYFST
FGDLSSPAAIAGNPKVHAHGKKILGAIDNAIHNLDD...VKGTLHDLSEEHANELHVDPE
NFRRLGEVLIVVLGAKLGKAFSPQVQHVWEKFIAVLVDALSHSYH......
>HBB_CALAR 
...V..........HLTGEEKSAVTALW.GKV..NVDEVGGEALGRLLVVYPWTQRFFES
FGDLSTPDAVMNNPKVKAHGKKVLGAFSDGLTHLDN...LKGTFAHLSELHCDKLHVDPE
NFRLLGNVLVCVLAHHFGKEFTPVVQAAYQKVVAGVANALAHKYH......
>HBB_COLLI 
...V..........HWSAEEKQLITSIW.GKV..NVADCGAEALARLLIVYPWTQRFFSS
FGNLSSATAISGNPNVKAHGKKVLTSFGDAVKNLDN...IKGTFAQLSELHCDKLHVDPE
NFRLLGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHALARKYH......
>HBB_EQUHE 
...V..........QLSGEEKAAVLALW.DKV..NEEEVGGEALGRLLVVYPWTQRFFDS
FGDLSNPAAVMGNPKVKAHGKKVLHSFGEGVHHLDN...LKGTFAQLSELHCDKLHVDPE
NFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH......
>HBB_LARRI 
...V..........HWSAEEKQLITGLW.GKV..NVADCGAEALARLLIVYPWTQRFFAS
FGNLSSPTAINGNPMVRAHGKKVLTSFGEAVKNLDN...IKNTFAQLSELHCDKLHVDPE
NFRLLGDILIIVLAAHFAKDFTPDSQAAWQKLVRVVAHALARKYH......
>HBB_MANSP 
...V..........HLTPEEKTAVTTLW.GKV..NVDEVGGEALGRLLVVYPWTQRFFDS
FGDLSSPDAVMGNPKVKAHGKKVLGAFSDGLNHLDN...LKGTFAQLSELHCDKLHVDPE
NFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKYH......
>HBB_ORNAN 
...V..........HLSGGEKSAVTNLW.GKV..NINELGGEALGRLLVVYPWTQRFFEA
FGDLSSAGAVMGNPKVKAHGAKVLTSFGDALKNLDD...LKGTFAKLSELHCDKLHVDPE
NFNRLGNVLIVVLARHFSKDFSPEVQAAWQKLVSGVAHALGHKYH......
>HBB_RABIT 
...V..........HLSSEEKSAVTALW.GKV..NVEEVGGEALGRLLVVYPWTQRFFES
FGDLSSANAVMNNPKVKAHGKKVLAAFSEGLSHLDN...LKGTFAKLSELHCDKLHVDPE
NFRLLGNVLVIVLSHHFGKEFTPQVQAAYQKVVAGVANALAHKYH......
>HBB_SPECI 
...V..........HLSDGEKNAISTAW.GKV..HAAEVGAEALGRLLVVYPWTQRFFDS
FGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDN...LKGTFASLSELHCDKLHVDPE
NFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALAHKYH......
>HBB_SPETO 
...V..........HLTDGEKNAISTAW.GKV..NAAEIGAEALGRLLVVYPWTQRFFDS
FGDLSSASAVMGNAKVKAHGKKVIDSFSNGLKHLDN...LKGTFASLSELHCDKLHVDPE
NFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALSHKYH......
>HBB_SUNMU 
...V..........HLSGEEKACVTGLW.GKV..NEDEVGAEALGRLLVVYPWTQRFFDS
FGDLSSASAVMGNPKVKAHGKKVLHSLGEGVANLDN...LKGTFAKLSELHCDKLHVDPE
NFRLLGNVLVVVLASKFGKEFTPPVQAAFQKVVAGVANALAHKYH......
>HBB_TACAC 
...V..........HLSGSEKTAVTNLW.GHV..NVNELGGEALGRLLVVYPWTQRFFES
FGDLSSADAVMGNAKVKAHGAKVLTSFGDALKNLDN...LKGTFAKLSELHCDKLHVDPE
NFNRLGNVLVVVLARHFSKEFTPEAQAAWQKLVSGVSHALAHKYH......
>HBB_TRIIN 
...V..........HLTPEEKALVIGLW.AKV..NVKEYGGEALGRLLVVYPWTQRFFEH
FGDLSSASAIMNNPKVKAHGEKVFTSFGDGLKHLED...LKGAFAELSELHCDKLHVDPE
NFRLLGNVLVCVLARHFGKEFSPEAQAAYQKVVAGVANALAHKYH......
>HBB_TUPGL 
...V..........HLSGEEKAAVTGLW.GKV..DLEKVGGQSLGSLLIVYPWTQRFFDS
FGDLSSPSAVMSNPKVKAHGKKVLTSFSDGLNHLDN...LKGTFAKLSELHCDKLHVDPE
NFRLLGNVLVRVLACNFGPEFTPQVQAAFQKVVAGVANALAHKYH......
>HBB_URSMA 
...V..........HLTGEEKSLVTGLW.GKV..NVDEVGGEALGRLLVVYPWTQRFFDS
FGDLSSADAIMNNPKVKAHGKKVLNSFSDGLKNLDN...LKGTFAKLSELHCDKLHVDPE
NFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKYH......
>HBE_PONPY 
...V..........HFTAEEKAAVTSLW.SKM..NVEEAGGEALGRLLVVYPWTQRFFDS
FGNLSSPSAILGNPKVKAHGKKVLTSFGDAIKNMDN...LKTTFAKLSELHCDKLHVDPE
NFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHKYH......
>HBF1_URECA 
..............GLTTAQIKAIQDHWFLNIKGCLQAAADSIFFKYLTAYPGDLAFFHK
FSSV.PLYGLRSNPAYKAQTLTVINYLDKVVDALGG..NAGALMKAKVPSH.DAMGITPK
HFGQLLKLVGGVFQEEF..SADPTTVAAWGDAAGVLVAAM..........K
>LGB1_PEA 
GFTDKQEALVNSSSE.FKQNLPGYSILFYTIVLEKAP..AAKGL................
FSFLKDTAGVEDSPKLQAHAEQVFGLVRDSAAQLRTKGEVVLGNATLGAIHVQKGVTNP.
HFVVVKEALLQTIKKASGNNWSEELNTAWEVAYDGLATAIKKAMKT....A
>LGB1_VICFA 
GFTEKQEALVNSSSQLFKQNPSNYSVLFYTIILQKAP..TAKAM................
FSFLKDSAGVVDSPKLGAHAEKVFGMVRDSAVQLRATGEVVLDGKD.GSIHIQKGVLDP.
HFVVVKEALLKTIKEASGDKWSEELSAAWEVAYDGLATAIK....A....A
>MYG_ESCGI 
...V...........LSDAEWQLVLNIW.AKVEADVAGHGQDILIRLFKGHPETLEKFDK
FKHLKTEAEMKASEDLKKHGNTVLTALGGILKKKGH...HEAELKPLAQSHATKHKIPIK
YLEFISDAIIHVLHSRHPGDFGADAQAAMNKALELFRKDIAAKYKELGFQG
>MYG_HORSE 
...G...........LSDGEWQQVLNVW.GKVEADIAGHGQEVLIRLFTGHPETLEKFDK
FKHLKTEAEMKASEDLKKHGTVVLTALGGILKKKGH...HEAELKPLAQSHATKHKIPIK
YLEFISDAIIHVLHSKHPGNFGADAQGAMTKALELFRNDIAAKYKELGFQG
>MYG_LYCPI 
...G...........LSDGEWQIVLNIW.GKVETDLAGHGQEVLIRLFKNHPETLDKFDK
FKHLKTEDEMKGSEDLKKHGNTVLTALGGILKKKGH...HEAELKPLAQSHATKHKIPVK
YLEFISDAIIQVLQNKHSGDFHADTEAAMKKALELFRNDIAAKYKELGFQG
>MYG_MOUSE 
...G...........LSDGEWQLVLNVW.GKVEADLAGHGQEVLIGLFKTHPETLDKFDK
FKNLKSEEDMKGSEDLKKHGCTVLTALGTILKKKGQ...HAAEIQPLAQSHATKHKIPVK
YLEFISEIIIEVLKKRHSGDFGADAQGAMSKALELFRNDIAAKYKELGFQG
>MYG_MUSAN 
..................VDWEKVNSVW.SAVESDLTAIGQNILLRLFEQYPESQNHFPK
FKN.KSLGELKDTADIKAQADTVLSALGNIVKKKGS...HSQPVKALAATHITTHKIPPH
YFTKITTIAVDVLSEMYPSEMNAQVQAAFSGAFKIICSDIEKEYKAANFQG
>MYG_PROGU 
...G...........LSDGEWQLVLNVW.GKVEGDLSGHGQEVLIRLFKGHPETLEKFDK
FKHLKAEDEMRASEELKKHGTTVLTALGGILKKKGQ...HAAELAPLAQSHATKHKIPVK
YLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDIAAKYKELGFQG
>MYG_SAISC 
...G...........LSDGEWQLVLNIW.GKVEADIPSHGQEVLISLFKGHPETLEKFDK
FKHLKSEDEMKASEELKKHGTTVLTALGGILKKKGQ...HEAELKPLAQSHATKHKIPVK
YLELISDAIVHVLQKKHPGDFGADAQGAMKKALELFRNDMAAKYKELGFQG