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function [dp_x,dp_y,ai,a_list,SUB_IND,p,energy]= preparecomparedata(SaveData,Run) dp_x=SaveData(Run).dp_x; dp_y=SaveData(Run).dp_y; criteria_val=SaveData(Run).criteriaid; NewVal=

function [iapp,ai,a_list,tau_list,omega_list,SUB_IND,energy,p]=applyprony(test_time,test_data,N,SUB_N,criteria_val) % Implements MATLAB Signal Processing Tooltbox prony function % performprony GU

% % FUNCTION 2.5 : "cp0201_waveform" % % Generates the energy-normalized pulse waveform % % Special case of the second derivative Gaussian pulse: % SCHOLTZ'S MONOCYCLE % % ********************

function [margt,margf,E]=margtfr(tfr,t,f) %MARGTFR Marginals and energy of a time-frequency representation. % [MARGT,MARGF,E]=MARGTFR(TFR,T,F) calculates the time and % frequency marginals and the en

function sig=sigmerge(x1,x2,ratio); %SIGMERGE Add two signals with given energy ratio in dB. % SIG=SIGMERGE(X1,X2,RATIO) adds two signals so that a given % energy ratio expressed in deciBels is satisf

subroutine e6molecule( Nc, Xc, Yc, Zc, TYPEc, DAMP2c, DAMP3c, & Np, Xp, Yp, Zp, TYPEp, DAMP2p, DAMP3p, & Nham, Nljgrs, EPS, SIG, CP, ALP, RMAX, & BoxSize, ENERGY ) impl

subroutine lrcorr( Nljgrs, Nham, BoxSize, NGROUPS, EPS, SIG, XLRCORR, & ELRCORR, ENERGY ) implicit none ! This routine calculates the Theodorou and Suter corrections to ! the LJ

subroutine IonMolecule( Nc, Xc, Yc, Zc, TYPEc, DAMPc, & Np, Xp, Yp, Zp, TYPEp, DAMPp, & Nham, Niongrs, CHARGE, BoxSize, ENERGY ) implicit none ! This routine calculates the coulo

subroutine RealInteract( Nb, Xb, Yb, Zb, TYPEb, DAMPb, & Nmol, LENGTH, Nham, Niongrs, & CHARGE, BoxSize, Alpha, ENERGY ) implicit none ! This routine calculates the total coulo

subroutine RealMolecule( Nc, Xc, Yc, Zc, TYPEc, DAMPc, & Np, Xp, Yp, Zp, TYPEp, DAMPp, & Nham, Niongrs, CHARGE, BoxSize, Alpha, ENERGY ) implicit none ! This routine calculates