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%% $Id: msc.Rd 99 2006-10-04 10:54:35Z bhm $\encoding{latin1}\name{msc}\alias{msc}\alias{predict.msc}\alias{makepredictcall.msc}\title{Multiplicative Scatter Correction}\description{ Performs multiplicative scatter/signal correction on a data matrix.}\usage{msc(X, reference = NULL)\method{predict}{msc}(object, newdata, \dots)\method{makepredictcall}{msc}(var, call)}\arguments{ \item{X, newdata}{numeric matrices. The data to scatter correct.} \item{reference}{numeric vector. Spectre to use as reference. If \code{NULL}, the column means of \code{X} are used.} \item{object}{an object inheriting from class \code{"msc"}, normally the result of a call to \code{msc} with a single matrix argument.} \item{var}{A variable.} \item{call}{The term in the formula, as a call.} \item{\dots}{other arguments. Currently ignored.}}\details{ \code{makepredictcall.msc} is an internal utility function; it is not meant for interactive use. See \code{\link{makepredictcall}} for details.}\value{ Both \code{msc} and \code{predict.msc} return a multiplicative scatter corrected matrix, with attribute \code{"reference"} the vector used as reference spectre. The matrix is given class \code{c("msc", "matrix")}. For \code{predict.msc}, the \code{"reference"} attribute of \code{object} is used as reference spectre.}\references{ Martens, H., N鎠, T. (1989) \emph{Multivariate calibration.} Chichester: Wiley.}\author{Bj鴕n-Helge Mevik and Ron Wehrens}\seealso{\code{\link{mvr}}, \code{\link{pcr}}, \code{\link{plsr}}, \code{\link{stdize}}}\examples{data(yarn)## Direct correction:Ztrain <- msc(yarn$NIR[yarn$train,])Ztest <- predict(Ztrain, yarn$NIR[!yarn$train,])## Used in formula:mod <- plsr(density ~ msc(NIR), ncomp = 6, data = yarn[yarn$train,])pred <- predict(mod, newdata = yarn[!yarn$train,]) # Automatically scatter corrected}\keyword{regression}\keyword{multivariate}
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