trace_test.seq

来自「这是一个基于HMM 模型的生物多序列比对算法的linux实现版本。hmmer」· SEQ 代码 · 共 26 行

>seq1 Basic traceback. SNB M ECT
ACDEFGHIKL
>seq2 C-terminal tail; one CC transition
ACDEFGHIKLY
>seq3 C-terminal tail; three CC transitions
ACDEFGHIKLYYY
>seq4 N-terminal tail; one NN transition
YACDEFGHIKL
>seq5 N-terminal tail; three NN transitions
YYYACDEFGHIKL
>seq6 one JJ
ACDEFGHIKLYACDEFGHIKL
>seq7 three JJ
ACDEFGHIKLYYYACDEFGHIKL
>seq8 D->E wing unfolding
ACDEFGHIK
>seq9 B->D wing unfolding
CDEFGHIKL
>seq10 MD, DD, DM transitions
ACDEHIKL
>seq11 MI, II, IM transitions
ACDEFYYYGHIKL
>seq12 bogosity
Y