⭐ 欢迎来到虫虫下载站! | 📦 资源下载 📁 资源专辑 ℹ️ 关于我们
⭐ 虫虫下载站

📄 pkinase.sto

📁 这是一个基于HMM 模型的生物多序列比对算法的linux实现版本。hmmer
💻 STO
📖 第 1 页 / 共 5 页
字号:
#=GS 7LES_DROME/2209-2481 AC    P13368#=GS JAK1_HUMAN/864-1137  AC    P23458#=GS EGFR_DROME/938-1194  AC    P04412#=GS RYK_HUMAN/327-593    AC    P34925#=GS MET_HUMAN/1078-1337  AC    P08581#=GS PHY1_CERPU/1004-1282 AC    P25848#=GS M3K9_HUMAN/3-262     AC    P80192#=GS KYK2_DICDI/108-364   AC    P18161#=GS KYK1_DICDI/1289-1559 AC    P18160#=GS KMIL_AVIMH/82-339    AC    P00531#=GS KPRO_MAIZE/534-812   AC    P17801#=GS AVR1_HUMAN/208-495   AC    Q04771#=GS AVR2_HUMAN/192-479   AC    P27037#=GS PKN1_MYXXA/59-320    AC    P33973#=GS KMOS_CERAE/60-338    AC    P10650#=GS KR1_PRVKA/53-332     AC    P17613#=GS KR1_HSV11/191-478    AC    P04413#=GS JAK1_HUMAN/571-833   AC    P23458#=GS HR25_YEAST/9-273     AC    P29295WEE1_HUMAN/299-569            FHELEKIGSGEFGSVFKCVKR........LDGCIYAIKRS..........#=GR WEE1_HUMAN/299-569      AS  ..................................................TTK_HUMAN/509-775             YSILKQIGSGGSSKVFQVLNE.........KKQIYAIKYVN........L#=GR TTK_HUMAN/509-775       AS  ..................................................STE7_YEAST/191-466            LVQLGKIGAGNSGTVVKALHV........PDSKIVAKKTIP........V#=GR STE7_YEAST/191-466      AS  ..................................................MKK1_YEAST/221-488            IETLGILGEGAGGSVSKCKLK........NGSKIFALKVIN.........#=GR MKK1_YEAST/221-488      AS  ..................................................BYR1_SCHPO/66-320             LEVVRHLGEGNGGAVSLVKHR..........NIFMARKTVYV......GS#=GR BYR1_SCHPO/66-320       AS  ..................................................ST20_YEAST/620-871            YANLVKIGQGASGGVYTAYEI........GTNVSVAIKQMNL.......E#=GR ST20_YEAST/620-871      AS  ..................................................CC15_YEAST/25-272             YHLKQVIGRGSYGVVYKAINK........HTDQVVAIKEVVY......EN#=GR CC15_YEAST/25-272       AS  ..................................................BYR2_SCHPO/394-658            WIRGALIGSGSFGQVYLGMNA........SSGELMAVKQVIL.......D#=GR BYR2_SCHPO/394-658      AS  ..................................................NINC_DROME/16-282             FEIYEEIAQGVNAKVFRAKEL........DNDRIVALKIQHY......DE#=GR NINC_DROME/16-282       AS  ..................................................SPK1_YEAST/198-466            SIIDEVVGQGAFATVKKAIER........TTGKTFAVKIIS.........#=GR SPK1_YEAST/198-466      AS  ..................................................KIN1_SCHPO/125-395            YVLGKTIGAGSMGKVKVAHHL........KTGEQFAIKIVT........R#=GR KIN1_SCHPO/125-395      AS  ..................................................CDR1_SCHPO/12-258             WRLGKTLGTGSTSCVRLAKHA........KTGDLAAIKIIP.........#=GR CDR1_SCHPO/12-258       AS  ..................................................K6A1_MOUSE/407-664            YVVKETIGVGSYSVCKRCVHK........ATNMEYAVKVID.........#=GR K6A1_MOUSE/407-664      AS  ..................................................KPBH_RAT/24-291               YDPKDIIGRGVSSVVRRCVHRA......TGDEFAVKIMEVS.........#=GR KPBH_RAT/24-291         AS  ..................................................KCC4_MOUSE/42-296             FEVESELGRGATSIVYRCKQK........GTQKPYALKVL..........#=GR KCC4_MOUSE/42-296       AS  ..................................................CDPK_SOYBN/34-292             YEVGRKLGQGQFGTTFECTRR........ASGGKFACKSIP.........#=GR CDPK_SOYBN/34-292       AS  ..................................................KPK2_PLAFK/111-364            YVLNKKIGKGSFSTAYIGTNI........LYGNRVVVKEVD.........#=GR KPK2_PLAFK/111-364      AS  ..................................................KMLS_CHICK/1453-1708          YNIEERLGSGKFGQVFRLVEK........KTGKVWAGKFFK.........#=GR KMLS_CHICK/1453-1708    AS  ..................................................MEK1_YEAST/162-444            EITNRIVGNGTFGHVLITHNSKERDEDVCYHPENYAVKIIK.........#=GR MEK1_YEAST/162-444      AS  ..................................................CHK1_SCHPO/10-272             YHIGREIGTGAFASVRLCYDD.........NAKIYAVKFVN........K#=GR CHK1_SCHPO/10-272       AS  ..................................................CC5_YEAST/82-337              YHRGHFLGEGGFARCFQIKDD.........SGEIFAAKTVA.........#=GR CC5_YEAST/82-337        AS  ..................................................PKD1_DICDI/36-291             FNFYGSLGSGSFGTAKLCRHR........GSGLFFCSKTLR.........#=GR PKD1_DICDI/36-291       AS  ..................................................KI82_YEAST/324-602            FEKIRLLGQGDVGKVYLVRER........DTNQIFALKVLN.........#=GR KI82_YEAST/324-602      AS  ..................................................KAKT_MLVAT/171-429            FEYLKLLGKGTFGKVILVKEK........ATGRYYAMKILK.........#=GR KAKT_MLVAT/171-429      AS  ..................................................KGP1_DROME/457-717            LEVVSTLGIGGFGRVELVKAHH......QDRVDIFALKCLK.........#=GR KGP1_DROME/457-717      AS  ..................................................ARK1_BOVIN/191-453            FSVHRIIGRGGFGEVYGCRKA........DTGKMYAMKCLD.........#=GR ARK1_BOVIN/191-453      AS  ..................................................FUSE_DROME/4-254              YAVSSLVGQGSFGCVYKATRK........DDSKVVAIKVISK.......R#=GR FUSE_DROME/4-254        AS  ..................................................PIM1_HUMAN/38-290             YQVGPLLGSGGFGSVYSGIRV........SDNLPVAIKHVE.........#=GR PIM1_HUMAN/38-290       AS  ..................................................KAB7_YEAST/1096-1354          FVSLQKMGEGAYGKVNLCIHK........KNRYIVVIKMIFK.......E#=GR KAB7_YEAST/1096-1354    AS  ..................................................SGV1_YEAST/60-366             YREDEKLGQGTFGEVYKGIHL........ETQRQVAMKKIIV......SV#=GR SGV1_YEAST/60-366       AS  ..................................................CC21_MEDSA/1-284              GENVEKIGEGTYGVVYKARDR........VTNETIALKKIR........L#=GR CC21_MEDSA/1-284        AS  ..................................................KI28_YEAST/7-290              YTKEKKVGEGTYAVVYLGCQH........STGRKIAIKEIK.........#=GR KI28_YEAST/7-290        AS  ..................................................MAK_RAT/4-284                 YTTMRQLGDGTYGSVLMGKSN........ESGELVAIKRMK.........#=GR MAK_RAT/4-284           AS  ..................................................KKIA_HUMAN/5-288              YEKIGKIGEGSYGVVFKCRNR........DTGQIVAIKKFL........E#=GR KKIA_HUMAN/5-288        AS  ..................................................CTK1_YEAST/183-469            YLRIMQVGEGTYGKVYKAKNT........NTEKLVALKKLRL.......Q#=GR CTK1_YEAST/183-469      AS  ..................................................KG3A_RAT/119-403              YTDIKVIGNGSFGVVYQARLA........ETRELVAIKKVL........Q#=GR KG3A_RAT/119-403        AS  ..................................................MK04_HUMAN/20-312             FVDFQPLGFGVNGLVLSAVDS........RACRKVAVKKIAL......SD#=GR MK04_HUMAN/20-312       AS  ..................................................ERK1_CANAL/68-371             YQILEIVGEGAYGIVCSAIHK........PSQQKVAIKKIEP.......F#=GR ERK1_CANAL/68-371       AS  ..................................................KC21_CHICK/39-324             YQLVRKLGRGKYSEVFEAINI........TNNEKVVVKILK.........#=GR KC21_CHICK/39-324       AS  ..................................................CLK1_MOUSE/160-476            YEIVDTLGEGAFGKVVECIDHK.......VGGRRVAVKIVKN.......V#=GR CLK1_MOUSE/160-476      AS  ..................................................NPR1_YEAST/438-742            IKTGADLGAGAGGSVKLAQRI........SDNKIFAVKEFR........T#=GR NPR1_YEAST/438-742      AS  ..................................................SAT4_YEAST/316-590            GRCQEVLGKGAFGVVRICQKKNVSSQDGNKSEKLYAVKEFK........R#=GR SAT4_YEAST/316-590      AS  ..................................................KKL6_YEAST/192-508            WKKVRPIGSGNFSTVLLYELMDQ....SNPKLKQVAVKRLKYPEELSNVE#=GR KKL6_YEAST/192-508      AS  ..................................................RAN1_SCHPO/18-295             LRFVSIIGAGAYGVVYKAEDI........YDGTLYAVKALCKD....GLN#=GR RAN1_SCHPO/18-295       AS  ..................................................TRKA_HUMAN/510-781            IVLKWELGEGAFGKVFLAECHNLL...PEQDKMLVAVKALK.........#=GR TRKA_HUMAN/510-781      AS  ..................................................KSYK_PIG/364-619              TLEDKELGSGNFGTVKKGYYQM......KKVVKTVAVKILK........N#=GR KSYK_PIG/364-619        AS  ..................................................BFR2_HUMAN/367-643            LTLGKPLGEGCFGQVVMAEAVGIDK.DKPKEAVTVAVKMLKDD.....AT#=GR BFR2_HUMAN/367-643      AS  ..................................................ABL1_CAEEL/311-562            IIMHNKLGGGQYGDVYEGYWK........RHDCTIAVKALK.........#=GR ABL1_CAEEL/311-562      AS  ..................................................7LES_DROME/2209-2481          LKLLRFLGSGAFGEVYEGQLKTE....DSEEPQRVAIKSLRK.......GJAK1_HUMAN/864-1137           LKRIRDLGEGHFGKVELCRYDPE.....DNTGEQVAVKSLK.........#=GR JAK1_HUMAN/864-1137     AS  ..................................................EGFR_DROME/938-1194           LRKGGVLGMGAFGRVYKGVWVPE....GENVKIPVAIKELLKS.....TG#=GR EGFR_DROME/938-1194     AS  ..................................................RYK_HUMAN/327-593             ITLKDVLQEGTFGRIFHGILIDEK...DPNKEKQAFVKTVKD.......Q#=GR RYK_HUMAN/327-593       AS  ..................................................MET_HUMAN/1078-1337           VHFNEVIGRGHFGCVYHGTLLDN.....DGKKIHCAVKSLN.........#=GR MET_HUMAN/1078-1337     AS  ..................................................PHY1_CERPU/1004-1282          IQITGSLGSGSSATVEKAVWL..........GTPVAKKTFY........G#=GR PHY1_CERPU/1004-1282    AS  ..................................................M3K9_HUMAN/3-262              LTLEEIIGIGGFGKVYRAFWI..........GDEVAVKAARH......DP#=GR M3K9_HUMAN/3-262        AS  ..................................................KYK2_DICDI/108-364            IQFIQKVGEGAFSEVWEGWWK..........GIHVAIKKLKII.....GD#=GR KYK2_DICDI/108-364      AS  ..................................................KYK1_DICDI/1289-1559          LEFGQTIGKGFFGEVKRGYWR..........ETDVAIKIIY.........#=GR KYK1_DICDI/1289-1559    AS  ..................................................KMIL_AVIMH/82-339             VLLSTRIGSGSFGTVYKGKWH........GDVAVKILKVVDP.......T#=GR KMIL_AVIMH/82-339       AS  ..................................................KPRO_MAIZE/534-812            RKFKVELGRGESGTVYKGVLE.........DDRHVAVKKLE........N#=GR KPRO_MAIZE/534-812      AS  ..................................................AVR1_HUMAN/208-495            ITLLECVGKGRYGEVWRGSWQ..........GENVAVKIFS.........#=GR AVR1_HUMAN/208-495      AS  ..................................................AVR2_HUMAN/192-479            LQLLEVKARGRFGCVWKAQLL..........NEYVAVKIFP.........#=GR AVR2_HUMAN/192-479      AS  ..................................................PKN1_MYXXA/59-320             FRLVRRLGRGGMGAVYLGEHV........SIGSRVAVKVLH.........#=GR PKN1_MYXXA/59-320       AS  ..................................................KMOS_CERAE/60-338             VCLLQRLGAGGFGSVYKATYH..........GVPVAIKQVN.........#=GR KMOS_CERAE/60-338       AS  ..................................................KR1_PRVKA/53-332              FEVLQPLQSGSEGRVFVARRP.........GEADTVVLKV..........#=GR KR1_PRVKA/53-332        AS  ..................................................KR1_HSV11/191-478             FTIHGALTPGSEGCVFDSSHP.........DYPQRVIVKA..........#=GR KR1_HSV11/191-478       AS  ..................................................JAK1_HUMAN/571-833            LVQGEHLGRGTRTHIYSGTLMDYK..DDEGTSEEKKIKVIL.........HR25_YEAST/9-273              FRIGRKIGSGSFGDIYHGTNL........ISGEEVAIKLES.........#=GR HR25_YEAST/9-273        AS  ..................................................#=GC seq_cons                     hphhptlGpGsaGpVapuhpt........tssphhAlKtlp.........WEE1_HUMAN/299-569            KKPLAGSVD.................EQNALREVYAHAVLG...QHSHVV#=GR WEE1_HUMAN/299-569      AS  ..................................................TTK_HUMAN/509-775             EEADNQTL...................DSYRNEIAYLNKLQQ..HSDKII#=GR TTK_HUMAN/509-775       AS  ..................................................STE7_YEAST/191-466            EQNNSTII...................NQLVRELSIVKNVK...PHENII#=GR STE7_YEAST/191-466      AS  ..................................................MKK1_YEAST/221-488            TLNTDPEY..................QKQIFRELQFNRSFQ....SEYIV#=GR MKK1_YEAST/221-488      AS  ..................................................BYR1_SCHPO/66-320             DSKLQK......................QILRELGVLHHCR....SPYIV#=GR BYR1_SCHPO/66-320       AS  ..................................................ST20_YEAST/620-871            KQPKKE......................LIINEILVMKGSK....HPNIV#=GR ST20_YEAST/620-871      AS  ..................................................CC15_YEAST/25-272             DEELND.......................IMAEISLLKNLN....HNNIV#=GR CC15_YEAST/25-272       AS  ..................................................BYR2_SCHPO/394-658            SVSESKDRHA..............KLLDALAGEIALLQELS....HEHIV#=GR BYR2_SCHPO/394-658      AS  ..................................................NINC_DROME/16-282             EHQVS........................IEEEYRTLRDYC...DHPNLP#=GR NINC_DROME/16-282       AS  ..................................................SPK1_YEAST/198-466            KRKVIGNM...................DGVTRELEVLQKLN....HPRIV#=GR SPK1_YEAST/198-466      AS  ..................................................KIN1_SCHPO/125-395            LHPDITKAKAAASAEATKAAQSEKNKEIRTVREAALSTLLR....HPYIC#=GR KIN1_SCHPO/125-395      AS  ..................................................CDR1_SCHPO/12-258             IRYAS........................IGMEILMMRLLR....HPNIL#=GR CDR1_SCHPO/12-258       AS  ..................................................K6A1_MOUSE/407-664            KSKRD........................PSEEIEILLRYG...QHPNII#=GR K6A1_MOUSE/407-664      AS  ..................................................KPBH_RAT/24-291               AERLSLEQLE..............EVRDATRREMHILRQVA...GHPHII#=GR KPBH_RAT/24-291         AS  ..................................................KCC4_MOUSE/42-296             KKTVDKK.....................IVRTEIGVLLRLS....HPNII#=GR KCC4_MOUSE/42-296       AS  ..................................................CDPK_SOYBN/34-292             KRKLLCKED.................YEDVWREIQIMHHLS...EHANVV

⌨️ 快捷键说明

复制代码 Ctrl + C
搜索代码 Ctrl + F
全屏模式 F11
切换主题 Ctrl + Shift + D
显示快捷键 ?
增大字号 Ctrl + =
减小字号 Ctrl + -