📄 segmentiris.m
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function [circleiris, circlepupil, imagewithnoise] = segmentiris(eyeimage)
% define range of pupil & iris radii
%CASIA
lpupilradius = 20;
upupilradius = 60;
lirisradius = 80;
uirisradius = 150;
% define scaling factor to speed up Hough transform
scaling = 0.4;
reflecthres = 240;
% find the iris boundary
[row, col, r] = findcircle(eyeimage, lirisradius, uirisradius, scaling, 2, 0.20, 0.19, 1.00, 0.00);
circleiris = [row col r];
rowd = double(row);
cold = double(col);
rd = double(r);
irl = round(rowd-rd);
iru = round(rowd+rd);
icl = round(cold-rd);
icu = round(cold+rd);
imgsize = size(eyeimage);
if irl < 1
irl = 1;
end
if icl < 1
icl = 1;
end
if iru > imgsize(1)
iru = imgsize(1);
end
if icu > imgsize(2)
icu = imgsize(2);
end
% to find the inner pupil, use just the region within the previously
% detected iris boundary
imagepupil = eyeimage( irl:iru,icl:icu);
%find pupil boundary
[rowp, colp, r] = findcircle(imagepupil, lpupilradius, upupilradius ,0.6,2,0.25,0.25,1.00,1.00);
rowp = double(rowp);
colp = double(colp);
r = double(r);
row = double(irl) + rowp;
col = double(icl) + colp;
row = round(row);
col = round(col);
circlepupil = [row col r];
% set up array for recording noise regions
% noise pixels will have NaN values
imagewithnoise = double(eyeimage);
%find top eyelid
topeyelid = imagepupil(1:(rowp-r),:);
lines = findline(topeyelid);
if size(lines,1) > 0
[xl yl] = linecoords(lines, size(topeyelid));
yl = double(yl) + irl-1;
xl = double(xl) + icl-1;
yla = max(yl);
y2 = 1:yla;
ind3 = sub2ind(size(eyeimage),yl,xl);
imagewithnoise(ind3) = NaN;
imagewithnoise(y2, xl) = NaN;
eyeimage(ind3)=NaN;
eyeimage(y2, xl) = NaN;
end
%find bottom eyelid
bottomeyelid = imagepupil((rowp+r):size(imagepupil,1),:);
lines = findline(bottomeyelid);
if size(lines,1) > 0
[xl yl] = linecoords(lines, size(bottomeyelid));
yl = double(yl)+ irl+rowp+r-2;
xl = double(xl) + icl-1;
yla = min(yl);
y2 = yla:size(eyeimage,1);
ind4 = sub2ind(size(eyeimage),yl,xl);
imagewithnoise(ind4) = NaN;
imagewithnoise(y2, xl) = NaN;
eyeimage(ind4)=NaN;
eyeimage(y2, xl) = NaN;
end
%For CASIA, eliminate eyelashes by thresholding
ref = eyeimage < 100;
coords = find(ref==1);
imagewithnoise(coords) = NaN;
eyeimage(coords)=NaN;
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