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<html><head><title>Some useful routines</title></head><body bgcolor=white><h1 align=center>Some useful routines from the library <font color=red>ddtsa</font></h1>This page shortly describes the routines which are included in thelibrary libddtsa.a. This library is created in the directorydresd../../source_c/routines. The related header file is <ahref="../../source_c/routines/tsa.h">tsa.h</a><h3 align=center>Description of the routines</h3><ul><li><p><a href="../../source_c/routines/scan_help.c">int scan_help</a>  <font color=red>(int argc,char **argv)</font>:   This routine just scans the options for a -h and returns a 1 if found  and a 0 if not.</p></li><li><p><a href="../../source_c/routines/get_series.c">double *get_series</a>  <font color=red>(char *name,  unsigned long *l,unsigned long ex, unsigned int col,  unsigned int verbosity)</font>:   This routine reads  a scalar time series from the file <font color=red>name</font> into  the array which is returned.<font color=red>l</font> is the number of  data read (will on return be the minimum of the file size and the value   given). The first <font color=red>ex</font> lines of the  file are ignored and the time series is supposed to be the <font  color=red>col</font>s column. <font color=red>verbosity</font>  specifies the <a href=../general.html#verbosity>verbosity level</a> of the program.</p></li><li><p><a href="../../source_c/routines/search_datafile.c">  char* search_datafile</a><font color=red>(int n,char  **names,unsinged int *col,unsigned int verbosity)</font>  This routines gets an array of strings <font color=red>names</font>  of size <font color=red>n</font> and scans it for a name of an existing  file. It returns the filename in case it found one or a NULL pointer if  not. If the filename is given like <i>filename,i</i> the <i>i</i> is  interpreted as the column and is returned in <font  color=red>col</font>, if <font color=red>col</font> was not a pointer  to NULL. <font color=red>verbosity</font> specifies the <a  href=../general.html#verbosity>verbosity level</a> of the program. </p></li><li><p><a href="../../source_c/routines/get_multi_series.c">  double **get_multi_series</a><font color=red>(char *name,  unsigned long *l,unsigned long ex, unsigned int *col,  char *which,char colfix,unsigned int verbosity)</font>:   Reads a multivariate time series  and returns a  pointer to it. The first three parameters are the same as in   <font color=red>get_series</font>. <font color=red>*col</font> is the number  of columns to read and <font color=red>which</font> is a string which   contains the <a href=../general.html#columns>columns to be read</a>, separated by commas. <font  color=red>colfix</font> determines whether <font  color=red>*col</font> can be modified within the routine.<br>  Example: to read the first three columns:  <font color=red>which=1,2,3</font> or if the columns should be permuted  <font color=red>which=3,2,1</font> means: x=third column, ...<br>  If <font color=red>which</font> contains less columns than specified in   <font color=red>col</font> it is extended in such a way that columns are  appended that are larger than the largest given in   <font color=red>which</font>.<br>  Example: <font color=red>col=3</font>  <font color=red>which=1,2</font> -&#155;<font color=red>which=1,2,3  </font> or <br>  <font color=red>which=5,1</font> -&#155;<font color=red>which=5,1,6  </font><br>  If <font color=red>which</font> contains more columns than  specified in <font color=red>*col</font>, then <font  color=red>which</font> determines the number of columns to read  unless the dimension was specified on the command line, explicitely.  <font color=red>verbosity</font>  specifies the <a href=../general.html#verbosity>verbosity level</a> of the program.</p></li><li><p><a href="../../source_c/routines/check_option.c">char* check_option</a>  <font color=red>(char **str,int n,char flag,char type)</font>  This routine looks for the flag <font color=red>flag</font> in the  string array <font color=red>str</font> (typically argv) which has  <font color=red>n</font> (typically argc) entries. The flag is  supposed to be of type <font color=red>type</font>. See the sources  for the valid types. The return string contains the parameter for  the flag or NULL if none was found.</p></li><li><p><a href="../../source_c/routines/rescale_data.c">void rescale_data</a>  <font color=red>  (double *s,unsigned long l,double *min,double *interval)</font>:   This routine rescales the data  in the array <font color=red>s</font>, which has a length  <font color=red>l</font>, to the interval [0:1]. On return   <font color=red>min</font> is the minimum of the original data and  <font color=red>interval</font> their original interval.</p></li><li><p><a href="../../source_c/routines/variance.c">void variance</a>  <font color=red>(double *s,  unsigned long l,double *av,double *var)</font>. Simply calculates  the average <font color=red>av</font> and the variance   <font color=red>var</font> of a time series <font color=red>s</font>,  which has length <font color=red>l</font>.</p></li><li><p><a href="../../source_c/routines/make_box.c">void make_box</a>  <font color=red>(double *s,long **box,long *list,  unsigned long l,unsigned int bs,unsigned int dim,unsigned int  del,double eps)</font>: This routine together with the  routine <a href="../../source_c/routines/find_neighbors.c">find_neighbors</a>   constitute the <a href="../chaospaper/citation.html#box-assisted"> box-assisted   search algorithm</a>. The parameters are: The time series   <font color=red>s</font> of length  <font color=red>l</font>, a two dimensional <font  color=red>box</font> of dimension <font color=red>bs</font>, where  bs has to be a power of 2, the search <font color=red>list</font>,  also of length l, the dimension <font color=red>dim</font> of the  embedding vectors, which are build with delay <font  color=red>del</font> and the size <font color=red>eps</font> of  the boxes.</p></li><li><p><a href="../../source_c/routines/find_neighbors.c">  unsigned long find_neighbors</a><font color=red>  (double *s,long **box,long *list,double *x,  unsigned long l,unsigned int bs,unsigned int dim,  unsigned int del,double eps,unsigned long *flist)</font>:  This routine searches for all neighbors of a vector   <font color=red>x</font> within the time series <font  color=red>s</font>. The indexes of the neighbors found are   stored in the array <font color=red>flist</font>, which has length  <font color=red>l</font> and the number of neighbors found is  returned. All other parameters have the same meaning as in the  routine  <a href="../../source_c/routines/make_box.c">make_box</a>.</p></li><li><p><a href="../../source_c/routines/solvele.c">  void solvele</a><font color=red>(double **mat,double *vec,unsigned  int dim)</font>: Solves a <font color=red>dim</font>-dimensional  system of linear equations given by <font  color=red><b>mat</b></font>*<b>x</b>=<font  color=red><b>vec</b></font>. It uses a Gaussian elimination  scheme. On return <font color=red>vec</font> contains <b>x</b>.</p></li><li><p><a href="../../source_c/routines/invert_matrix.c"> double   **invert_matrix</a>  <font color=red>(double **mat,unsigned int size)</font>: Inverts the  matrix <font color=red>mat</font> which is <font  color=red>size</font>x<font color=red>size</font>. It uses the  routine <a href="../../source_c/routines/solvele.c">solvele</a>.  The inverse matrix is returned.</p></li><li><p><a href="../../source_c/routines/test_outfile.c">  void test_outfile</a><font color=red>(char *name)</font>:   This routine just checks whether the program can write to the file  named <font color=red>name</font>. If not the program exits.</p></li><li><p><a href="../../source_c/routines/exclude_interval.c">  unsigned long exclude_interval</a><font color=red>(unsigned long  found,long ex0,long ex1,long *before,long *newlist)</font>: This  routine is meant to be used in connection with the <a  href="../../source_c/routines/find_neighbors.c">find_neighbors</a>  routine. After having found <font color=red>found</font> neighbors  which are stored in <font color=red>before</font> with the latter  routine, this new routine allows to exclude a interval of indexes  bounded by <font color=red>ex0</font> and <font color=red>ex1</font>  from this list. The modified list is returned in <font  color=red>newlist</font> and the new number of neigbors is the  return value of the routine.</p></li><li><p><a href="../../source_c/routines/make_multi_box.c">void make_multi_box</a><font color=red>(double **series,long**box,long *list,unsigned long length,unsigned int bs,unsigned intdim, unsigned int emb, unsigned int del,double eps)</font>: Thisroutine is used to create the mesh for the box assisted searchalgorithm in case you have multivariate data. The parameter <fontcolor=red>dim</font> determines the number of components of thevector. All other parameter have the same meaning as in <ahref="../../source_c/routines/make_box.c">make_box</a>.</p></li><li><p><a href="../../source_c/routines/find_multi_neighbors.c">  unsigned long find_multi_neighbors</a><font color=red>  (double *s,long **box,long *list,double **x,  unsigned long l,unsigned int bs,unsigned int dim,  unsigned int emb,unsigned int del,double eps,unsigned long  *flist)</font>:  This routine searches for all neighbors of a multicomponent vector  <font color=red>x</font> within the multicomponent time series <font  color=red>s</font>. <font color=red>dim</font> is the number of  components. All other parameters have the same meaning as the ones  of <a href="../../source_c/routines/find_neighbors.c">  find_neighbors</a>.</p></li><li><p><a href="../../source_c/routines/what_i_do.c">void  what_i_do</a><font color=red>(char *text,char *name)</font>: Just  writes a message to stderr saying what the program <font  color=red>name</font> does (<font color=red>text</font>).</p></li><li><p><a href="../../source_c/routines/myfgets.c">void  myfgets</a><font color=red>(char *str,int *size,FILE *fin, unsigned  int verbosity)</font>: This  routine wraps the fgets routine of C to handle looong input  lines. The parameters have the same meaning as in fgets. The only  differences are: <font color=red>size</font> can be changed inside  and <font color=red>verbosity</font> handles the <a href=../general.html#verbosity>verbosity level</a> for  the output of warnings.</p></li></ul></body></html>

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