gammadeltagammadeltabitstreamhpindexreader.java

MG4J (Managing Gigabytes for Java) is a free full-text search engine for large document collections

     else {
      quantumBitLength += Fast.nat2int( ibs.readDelta() );
      positionsQuantumBitLength += Fast.nat2int( ibs.readDelta() );
      entryBitLength += Fast.nat2int( ibs.readDelta() );
     }
     if ( DEBUG ) System.err.println( "{" + this + "} quantum bit length=" + quantumBitLength + " positions quantum bit length=" + positionsQuantumBitLength + " entry bit length=" + entryBitLength );
    }
    if ( DEBUG ) System.err.println( "{" + this + "} Reading tower; pointer=" + pointer + " maxh=" + maxh + " s=" + s );
    if ( s > 0 ) {
     towerLength = entryBitLength * ( s + 1 ) + Fast.nat2int( ibs.readDelta() );
     if ( DEBUG ) System.err.println( "{" + this + "} Tower length=" + towerLength );
    }
    // We store the number of bits read at the start of the tower (just after the
    // length).
    bitsAtTowerStart = ibs.readBits();
    if ( truncated ) {
     if ( DEBUG ) System.err.println( "{" + this + "} Truncated--reading tops" );
     // We read the tower top.
     pointerSkip[ s ] = Fast.nat2int( ibs.readGolomb( towerTopB[ s ], towerTopLog2B[ s ] ) ) + pointerPrediction[ s ];
     bitSkip[ s ] = quantumBitLength * ( 1 << s ) + entryBitLength * ( ( 1 << s + 1 ) - s - 2 ) + Fast.nat2int( ibs.readLongDelta() );
     positionsBitSkip[ s ] = positionsQuantumBitLength * ( 1 << s ) + Fast.nat2int( ibs.readLongDelta() );
    }
    else {
     // We copy the tower top from the lowest inherited entry suitably updated.
     pointerSkip[ s ] = pointerSkip[ s + 1 ] - ( currentDocument - pointerAtLastSkipTower );
     bitSkip[ s ] = bitSkip[ s + 1 ] - ( bitsAtTowerStart - readBitsAtLastSkipTower ) - towerLength;
     // TODO: note that we could use the same method for pointers and bit skips!
     positionsBitSkip[ s ] = positionsBitSkip[ s + 1 ] - positionsBitSkip[ s ];
     if ( ASSERTS ) assert positionsBitSkip[ s ] > 0 : positionsBitSkip[ s ] + " <= " + 0;
    }
    // We read the remaining part of the tower, at least until we point after pointer.
    if ( currentDocument + pointerSkip[ i ] > pointer ) {
     for ( i = s - 1; i >= 0; i-- ) {
      pointerSkip[ i ] = Fast.nat2int( ibs.readGolomb( towerLowerB[ i ], towerLowerLog2B[ i ] ) ) + pointerSkip[ i + 1 ] / 2;
      bitSkip[ i ] = ( bitSkip[ i + 1 ] - entryBitLength * ( i + 1 ) ) / 2 - Fast.nat2int( ibs.readLongDelta() );
      positionsBitSkip[ i ] = positionsBitSkip[ i + 1 ] / 2 - Fast.nat2int( ibs.readLongDelta() );
      if ( DEBUG && currentDocument + pointerSkip[ i ] <= pointer ) System.err.println( "{" + this + "} stopping reading at i=" + i + " as currentDocument (" + currentDocument
        + ") plus pointer skip (" + pointerSkip[ i ] + ") is smaller than or equal target (" + pointer + ")" );
      if ( currentDocument + pointerSkip[ i ] <= pointer ) break;
     }
    }
   }
   /*
			 * If we did not read the entire tower, we need to fix the skips we read (as they are
			 * offsets from the *end* of the tower) and moreover we must make unusable the rest of
			 * the tower (for asserts).
			 */
   if ( i > 0 ) {
    final long fix = ibs.readBits() - bitsAtTowerStart;
    for ( j = s; j >= i; j-- )
     bitSkip[ j ] += towerLength - fix;
    if ( ASSERTS ) for ( ; j >= 0; j-- )
     pointerSkip[ j ] = Integer.MAX_VALUE;
   }
   else state = BEFORE_COUNT;
   // We update the inherited tower.
   final long deltaBits = ibs.readBits() - readBitsAtLastSkipTower;
   final int deltaPointers = currentDocument - pointerAtLastSkipTower;
   if ( ASSERTS ) assert lastPositionsIncrement >= 0 : lastPositionsIncrement + " < " + 0;
   for ( j = Fast.mostSignificantBit( k ^ ( cache >> quantumDivisionShift ) ); j >= s + 1; j-- ) {
    bitSkip[ j ] -= deltaBits;
    positionsBitSkip[ j ] -= lastPositionsIncrement;
    pointerSkip[ j ] -= deltaPointers;
   }
   readBitsAtLastSkipTower = ibs.readBits();
   pointerAtLastSkipTower = currentDocument;
   lowest = i < 0 ? 0 : i;
   if ( DEBUG ) {
    System.err.println( "{" + this + "} " + "Computed skip tower (lowest: " + lowest + ") for document record number " + numberOfDocumentRecord + " (pointer " + currentDocument + ") from " + Math.max( i, 0 ) + ": " );
    System.err.print( "% " );
    for ( j = 0; j <= s; j++ )
     System.err.print( pointerSkip[ j ] + ":" + bitSkip[ j ] + ":" + positionsBitSkip[ j ] + " " );
    System.err.print( " [" );
    for ( ; j <= height; j++ )
     System.err.print( pointerSkip[ j ] + ":" + bitSkip[ j ] + ":" + positionsBitSkip[ j ] + " " );
    System.err.print( "]" );
    System.err.println();
   }
   if ( ASSERTS ) {
    for ( j = Fast.mostSignificantBit( k ^ ( cache >> quantumDivisionShift ) ); j >= s + 1; j-- ) {
     assert positionsBitSkip[ j ] >= 0 : "positionsBitSkip[" + j + "] = " + positionsBitSkip[ j ] + " < " + 0;
     assert positionsBitSkip[ j ] >= positionsBitSkip[ j - 1 ] :
      "positionsBitSkip[" + j + "] = " + positionsBitSkip[ j ] + " < " + positionsBitSkip[ j - 1 ] + " = positionsBitSkip[" + ( j - 1 ) + "]";
    }
   }
  }
  public int skipTo( final int p ) throws IOException {
   if ( DEBUG ) System.err.println( this + ".skipTo(" + p + ") [currentDocument=" + currentDocument + ", numberOfDocumentRecord=" + numberOfDocumentRecord + ", positionsBitsOffset=" + positionsBitsOffset + "]" );
   // If we are just at the start of a list, let us read the first pointer.
   if ( numberOfDocumentRecord == -1 ) nextDocument(); // TODO: shouldn't we just read the
                // tower?
   if ( currentDocument >= p ) {
    if ( DEBUG ) System.err.println( this + ": No skip necessary, returning " + currentDocument );
    return currentDocument;
   }
   if ( state == BEFORE_TOWER ) {
    lastPositionsIncrement = maxh >= 0 ? positionsBitSkip[ 0 ] : 0;
    readTower( p );
    if ( DEBUG ) System.err.println( this + ": Incrementing positionsBitsOffset by " + lastPositionsIncrement + " in skipTo() initial phase" );
    positionsBitsOffset += lastPositionsIncrement;
   }
   final int[] pointerSkip = this.pointerSkip;
   for ( ;; ) {
    if ( ASSERTS ) assert maxh < 0 || lowest > 0 || pointerSkip[ 0 ] != Integer.MAX_VALUE;
    // If on a defective quantum (no tower) or p is inside the current quantum (no
    // need to scan the tower) we bail out.
    if ( maxh < 0 || lowest == 0 && pointerAtLastSkipTower + pointerSkip[ 0 ] > p ) break;
    if ( DEBUG ) System.err.println( this + ": In for loop, currentDocument=" + currentDocument + ", maxh=" + maxh + ", numberOfDocumentRecord=" + numberOfDocumentRecord + ", p=" + p );
    final int cacheOffset = ( numberOfDocumentRecord & wModuloMask );
    final int k = cacheOffset >> quantumDivisionShift;
    final int top = Fast.mostSignificantBit( k ^ ( Math.min( w, frequency - numberOfDocumentRecord + cacheOffset ) >> quantumDivisionShift ) );
    int i;
    for ( i = lowest; i <= top; i++ ) {
     if ( ASSERTS && ( k & 1 << i ) != 0 ) assert pointerSkip[ i ] == pointerSkip[ i + 1 ];
     if ( ASSERTS ) assert pointerSkip[ i ] != Integer.MAX_VALUE : "Invalid pointer skip " + i + " (lowest=" + lowest + ", top=" + top + ")";
     if ( pointerAtLastSkipTower + pointerSkip[ i ] > p ) break;
    }
    if ( --i < 0 ) break;
    if ( ASSERTS ) assert i >= lowest : i + " < " + lowest;
    if ( DEBUG ) System.err.println( this + ": Safely after for with i=" + i + ", P[i]=" + pointerSkip[ i ] + ", A[i]=" + bitSkip[ i ] + ", B[i]=" + positionsBitSkip[ i ] );
    if ( DEBUG ) System.err.println( this + ": [" + ibs.readBits() + "] Skipping " + ( bitSkip[ i ] - ( ibs.readBits() - readBitsAtLastSkipTower ) ) + " bits ("
      + ( ( ( k & -( 1 << i ) ) + ( 1 << i ) ) * quantum - cacheOffset ) + " records) to get to document pointer " + ( currentDocument + pointerSkip[ i ] ) );
    ibs.skip( bitSkip[ i ] - ( ibs.readBits() - readBitsAtLastSkipTower ) );
    /* We accumulate the number of bits that must be skipped in the positions stream to reach the position
				 * corresponding to the current tower. */
    if ( DEBUG ) System.err.println( this + ": Incrementing positionsBitsOffset by " + positionsBitSkip[ i ] + " (height " + i + ")" );
    lastPositionsIncrement = positionsBitSkip[ i ];
    positionsBitsOffset += lastPositionsIncrement;
    if ( ASSERTS && positionsLength != -1 ) assert positionsBitsOffset <= positionsLength : positionsBitsOffset + " > " + positionsLength;
    state = BEFORE_TOWER;
    currentDocument = pointerSkip[ i ] + pointerAtLastSkipTower;
    numberOfDocumentRecord += ( ( k & -( 1 << i ) ) + ( 1 << i ) ) * quantum - cacheOffset;
    // If we skipped beyond the end of the list, we invalidate the current document.
    if ( numberOfDocumentRecord == frequency ) {
     currentDocument = Integer.MAX_VALUE;
     positionsUnread = false;
     state = BEFORE_POINTER; // We are actually before a frequency, but we must
     // avoid that calls to nextDocument() read anything
    }
    else {
     positionsUnread = true;
     readTower( p ); // Note that if we are exactly on the destination pointer, we will read the entire tower.
    }
    count = -1; // We must invalidate count as readDocumentPointer() would do.
    positionsToReadToReachCurrentPosition = 0;
    if ( endOfList() ) {
     if ( DEBUG ) System.err.println( this + ".toSkip(): end-of-list, returning " + currentDocument + ", state=" + state );
     // Note that if p == Integer.MAX_VALUE, we are certainly beyond end-of-list
     return p == Integer.MAX_VALUE ? Integer.MAX_VALUE : currentDocument;
    }
   }
   if ( DEBUG ) System.err.println( this + ": Completing sequentially, currentDocument=" + currentDocument + ", numberOfDocumentRecord=" + numberOfDocumentRecord + ", p=" + p );
   while ( currentDocument < p ) {
    if ( DEBUG ) System.err.println( this + ": Skipping sequentially (second), currentDocument=" + currentDocument + ", numberOfDocumentRecord=" + numberOfDocumentRecord + ", p=" + p );
    if ( nextDocument() == -1 ) {
     if ( DEBUG ) System.err.println( this + ": end-of-list, returning MAX_VALUE" );
     return Integer.MAX_VALUE;
    }
   }
   if ( DEBUG ) System.err.println( this + ".toSkip(): Returning " + currentDocument );
   return currentDocument;
  }
  public void dispose() throws IOException {
   parent.close();
  }
  public boolean hasNext() {
   return !endOfList();
  }
  public int nextInt() {
   if ( !hasNext() ) throw new NoSuchElementException();
   try {
    return nextDocument();
   }
   catch ( IOException e ) {
    throw new RuntimeException( e );
   }
  }
  public String toString() {
   return index + " [" + term + "]";
  }
  /**
		 * An interval iterator returning the positions of the current document as singleton
		 * intervals.
		 */
  private final class IndexIntervalIterator extends AbstractObjectIterator<Interval> implements IntervalIterator {
   int pos = -1;
   public void reset() throws IOException {
    pos = -1;
    if ( positionsUnread ) updatePositionCache(); // This guarantees the position cache is ok
   }
   public void intervalTerms( final IntSet terms ) {
    terms.add( BitStreamHPIndexReaderIndexIterator.this.term );
   }
   public boolean hasNext() {
    return pos < count - 1;
   }
   public Interval next() {
    if ( !hasNext() ) throw new NoSuchElementException();
    return Interval.valueOf( positionCache[ ++pos ] );
   }
   public Interval nextInterval() {
    return pos < count - 1 ? Interval.valueOf( positionCache[ ++pos ] ) : null;
   }
   public int extent() {
    return 1;
   }
   public String toString() {
    return index + ": " + term + "[doc=" + currentDocument + ", count=" + count + ", pos=" + pos + "]";
   }
  };
  public Reference2ReferenceMap<Index, IntervalIterator> intervalIterators() throws IOException {
   intervalIterator();
   return singletonIntervalIterator;
  }
  public IntervalIterator intervalIterator() throws IOException {
   return intervalIterator( keyIndex );
  }
  public IntervalIterator intervalIterator( final Index index ) throws IOException {
   if ( ASSERTS ) ensureCurrentDocument();
   // TODO: this was if ( index != keyIndex || hasPayloads )
   if ( index != keyIndex ) return IntervalIterators.TRUE;
   if ( ASSERTS ) assert intervalIterator != null;
   intervalIterator.reset();
   return intervalIterator;
  }
  public ReferenceSet<Index> indices() {
   return index.singletonSet;
  }
 }
 private IndexIterator documents( final CharSequence term, final int termNumber ) throws IOException {
  indexIterator.term( term );
  indexIterator.position( termNumber );
  return indexIterator;
 }
 public IndexIterator documents( final int term ) throws IOException {
  return documents( null, term );
 }
 public IndexIterator documents( final CharSequence term ) throws IOException {
  if ( closed ) throw new IllegalStateException( "This " + getClass().getSimpleName() + " has been closed" );
  if ( index.termMap != null ) {
   final int termIndex = (int)index.termMap.getLong( term );
   if ( termIndex == -1 ) return index.emptyIndexIterator;
   return documents( term, termIndex );
  }
  throw new UnsupportedOperationException( "Index " + index + " has no term map" );
 }
 @Override
 public IndexIterator nextIterator() throws IOException {
  return indexIterator.advance();
 }
 public String toString() {
  return getClass().getSimpleName() + "[" + index + "]";
 }
 public void close() throws IOException {
  super.close();
  indexIterator.ibs.close();
  indexIterator.positions.close();
 }
}