help_alphabet.html

来自「EM算法的改进」· HTML 代码 · 共 38 行

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<!---#### $Id: help_alphabet.html 1339 2006-09-21 19:46:28Z tbailey $#### $Log$## Revision 1.2  2006/03/07 23:30:20  nadya## merge branches v3_5_1 and v3_5_2 back to the trunk#### Revision 1.1.1.1.6.1  2006/02/22 20:49:02  nadya## enabling styling with js and css#### Revision 1.1.1.1  2005/07/31 20:11:49  nadya## Importing from meme-3.0.14, and adding configure/make####---><HTML><HEAD><TITLE>MEME - Alphabet</TITLE><script src="template-css.js" type="text/javascript"></script></HEAD><body class="body"><script src="template-header.js" type="text/javascript"></script>        <HR>        <font> MEME accepts DNA or protein sequences. The sequences must all be of the <B>same type</B>, either protein or DNA. </font>        <P>        <UL>          <LI> <NOBR><B>Protein sequences</B> should use the standard IUPAC alphabet: <B>ACDEFGHIKLMNPQRSTVWY</B>.</NOBR><BR>            They may also contain the ambiguous letters <B>"BUXZ"</B>, which MEME converts to <B>"X"</B> and treats as "unknown".          <LI> <B>DNA sequences</B> should use the standard DNA alphabet: <B>ACGT</B>.<BR>            They may also contain the ambiguous letters <B>"BDHKMNRSUVWY"</B>, which MEME converts to <B>"X"</B> and treats as "unknown".        </UL>        <font> <B>Note:</B> If none of the sequences in your dataset contain any of the letters <B>"EFILPQXZ"</B>, MEME will assume your sequences are DNA. You can force MEME to interpret them as protein sequences by adding an <B>"X"</B> to the end (or beginning) of one of the sequences in your dataset. </font>        <HR><script src="template-footer.js" type="text/javascript"></script></body></html>

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