meme-output-example.html

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 <TD ALIGN=RIGHT NOWRAP>6.6e-13 <TD><TABLE WIDTH=400 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=208><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=40><FONT COLOR=white>2  <TD WIDTH=108><HR SIZE=4 NOSHADE>  <TD WIDTH=44> </TABLE><TR><TH COLSPAN=2 ROWSPAN=2 ALIGN=LEFT><FONT COLOR=BLUE>SCALE  <TD><TABLE WIDTH=400 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>    <TD WIDTH=48 ALIGN=LEFT><FONT COLOR=BLUE>|    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>|    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>|    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>|    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>|    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>|    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>|    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>|  <TR><TD WIDTH=48 ALIGN=LEFT><FONT COLOR=BLUE>1    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>25    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>50    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>75    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>100    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>125    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>150    <TD WIDTH=50 ALIGN=LEFT><FONT COLOR=BLUE>175  </TABLE></TABLE><CENTER><H3><A NAME=BLOCKS2><HR></A><A HREF=#BLOCKS_doc>	Motif 2 in BLOCKS format</A> <HR></H3></CENTER><INPUT TYPE = HIDDEN NAME = BLOCKS2 VALUE = "BL   MOTIF 2 width=20 seqs=5ICYA_MANSE               (  100) NLVPWVLATDYKNYAINYNC  1 BBP_PIEBR                (   96) ENVFNVLSTDNKNYIIGYYC  1 RETB_BOVIN               (  101) NDDHWIIDTDYETFAVQYSC  1 MUP2_MOUSE               (  105) FNTFTIPKTDYDNFLMAHLI  1 LACB_BOVIN               (  105) ENKVLVLDTDYKKYLLFCME  1 //"><INPUT TYPE = SUBMIT NAME = action VALUE = 'View BLOCK 2'><BR><INPUT TYPE = SUBMIT NAME = action VALUE = 'Submit BLOCK 2'><B>to <A HREF='http://blocks.fhcrc.org/blocks/process_blocks.html'>BLOCKS multiple alignment processor.</B></A><CENTER><H3><A NAME=pssm2><HR></A><A HREF=#pssm_doc>	Motif 2 position-specific scoring matrix</A> <HR></H3></CENTER><INPUT TYPE = HIDDEN NAME = pssm2 VALUE = "log-odds matrix: alength= 20 w= 20 n= 808 bayes= 7.32733 E= 1.3e-004   -116   -324    -64    181    136   -144    -82   -221   -110   -238   -136    235   -162      0    -39    -57    -86   -222   -289   -199   -264   -361     -4   -243   -347   -231    -89   -277   -263    -94   -248    377   -263   -136   -183   -110   -174   -332   -348   -353    -66   -251     55    -62   -218   -174    -92    -65     47   -162    -65    -95   -142     12     -3    -58    128    212   -277   -241   -126   -208   -290   -239    294   -248    179    -55   -244    -93    -23   -219    151   -123   -126   -139   -115     66   -140    111   -163   -256   -286   -240   -117   -258   -187   -104   -233     -2    -61     22   -239   -123   -124   -153     70   -128    496   -172   -187   -259   -460   -433   -253   -411   -393    294   -445   -100    -72   -409   -350   -346   -317   -333   -179    284   -423   -403   -241   -288   -462   -384   -125   -379   -303    115   -384    294     55   -375     98   -219   -226   -288   -207    -90   -286   -303     87   -310    199    -26   -267   -139    -74   -219     69   -226   -114    -38   -135     29     -2    118    -60   -209   -302   -248   -207   -284   -375   -406   -362   -318   -321   -234   -360   -351   -189   -221   -300   -234   -236    -21    413   -235   -394   -430   -314   -425    368   -126   -416   -331   -261   -375   -424   -423   -332   -101   -381   -278   -298   -284   -333   -389   -419   -420   -225   -294   -274   -298     79   -283    -38   -226   -307   -220   -157    120   -267   -192   -179   -191   -229   -254    -84    364   -140   -422    109    152   -378   -212   -152   -292    227   -299   -190   -123   -188     11    -34   -125   -141   -275   -395   -345   -219   -352   -147   -205   -340   -210    -87   -272     -8   -326   -217    360   -237    -84    -81    -94     66   -308   -341   -333   -252   -295   -377   -356    284   -344    -34   -222   -366   -206   -151   -294   -288   -226   -210   -233   -263   -256    -55    339    187   -211   -422   -353   -120   -290   -268    186   -351    201     34   -320   -273   -212   -215   -199   -130     -4   -258   -258   -245   -306   -430   -410   -197   -384   -360    356   -396     52    173   -359   -346   -288   -286   -287   -197    121   -336   -320    101   -261   -102    -53    108    107    -47   -151    -62   -172    -64    119   -120    207     16    -25    -39   -150   -255   -163   -159    113   -291   -265    139   -272    185   -163   -283   -165    -93   -236   -215   -167   -141   -152   -187   -189    -63    335    -70   -186   -203   -142    -27   -188    -50    -16   -146     73    243     97   -158    -34    -48    101    -41    -46   -169    156   -296    492   -486   -201   -375   -433   -397    -94   -465   -327   -236   -427   -408   -348   -325   -347   -285   -273   -475   -467 "><INPUT TYPE = SUBMIT NAME = action VALUE = 'View PSSM 2'><CENTER><H3><A NAME=pspm2><HR></A><A HREF=#pspm_doc>	Motif 2 position-specific probability matrix</A> <HR></H3></CENTER><INPUT TYPE = HIDDEN NAME = pspm2 VALUE = "letter-probability matrix: alength= 20 w= 20 n= 808 E= 1.3e-004  0.032008  0.003091  0.043880  0.270369  0.111568  0.021231  0.014687  0.010339  0.039904  0.016638  0.007179  0.270043  0.010552  0.029256  0.023973  0.039284  0.026211  0.014867  0.002331  0.012589  0.011450  0.002401  0.066534  0.014318  0.003909  0.011552  0.014042  0.006973  0.013808  0.045272  0.003312  0.726528  0.005234  0.011368  0.008820  0.027339  0.014303  0.006960  0.001554  0.004324  0.045251  0.005136  0.099769  0.049888  0.009538  0.017240  0.013704  0.030460  0.118766  0.028112  0.011727  0.027391  0.012135  0.031892  0.030823  0.039152  0.115493  0.301591  0.002541  0.009392  0.029934  0.006911  0.009133  0.014670  0.332829  0.010301  0.090048  0.032519  0.015765  0.045539  0.015711  0.011656  0.092276  0.012458  0.013088  0.022310  0.021474  0.109455  0.006588  0.107334  0.023030  0.004946  0.009422  0.014560  0.019318  0.009618  0.007125  0.023162  0.017027  0.085376  0.012045  0.061630  0.006208  0.012490  0.013307  0.020257  0.077420  0.028644  0.539262  0.015151  0.019524  0.004853  0.002817  0.003837  0.007481  0.003333  0.001707  0.365109  0.003926  0.043264  0.011190  0.003119  0.002882  0.002667  0.003484  0.005829  0.013773  0.497223  0.000923  0.003058  0.013417  0.003965  0.002769  0.005369  0.018159  0.004139  0.003187  0.105761  0.005997  0.664352  0.027015  0.003938  0.064037  0.006423  0.006558  0.007970  0.011357  0.037092  0.002389  0.006106  0.130922  0.003407  0.270564  0.064021  0.006814  0.021865  0.015590  0.010435  0.137674  0.018102  0.008363  0.040899  0.012728  0.035797  0.031068  0.132991  0.031416  0.016267  0.002144  0.008934  0.017077  0.004075  0.005057  0.004623  0.003535  0.006314  0.002802  0.009391  0.007043  0.007620  0.004986  0.011481  0.004052  0.005781  0.006120  0.050675  0.832113  0.013602  0.001127  0.002525  0.008139  0.001535  0.873188  0.032034  0.002430  0.005774  0.004248  0.003537  0.004519  0.004622  0.001844  0.026334  0.002312  0.004257  0.003983  0.008174  0.004732  0.004687  0.000947  0.002703  0.014990  0.003804  0.010209  0.009730  0.074757  0.008093  0.020011  0.009966  0.010205  0.018869  0.006196  0.122202  0.005112  0.007713  0.009088  0.015562  0.009739  0.011934  0.009679  0.622142  0.027180  0.001567  0.145409  0.220364  0.003145  0.013192  0.009039  0.006306  0.411729  0.010929  0.004942  0.022649  0.008858  0.031479  0.024750  0.024543  0.017955  0.010291  0.001120  0.004554  0.015679  0.002549  0.024718  0.018622  0.004114  0.013434  0.014186  0.007243  0.080917  0.009062  0.004102  0.644220  0.006273  0.016301  0.017863  0.030405  0.075495  0.008221  0.001627  0.004969  0.012490  0.003782  0.004999  0.006533  0.311220  0.005292  0.020581  0.010241  0.006786  0.020735  0.006474  0.006937  0.004429  0.006107  0.007312  0.011667  0.007686  0.011774  0.011802  0.523153  0.261687  0.006758  0.003650  0.006646  0.018855  0.007670  0.004061  0.173482  0.007529  0.349203  0.023390  0.005783  0.004898  0.006730  0.007085  0.014687  0.019305  0.067370  0.002891  0.008320  0.013123  0.003519  0.003461  0.004471  0.011097  0.004013  0.002139  0.563637  0.005489  0.124417  0.061137  0.004401  0.002947  0.003962  0.004313  0.007984  0.012184  0.160598  0.001691  0.005416  0.143897  0.004796  0.033739  0.053310  0.091558  0.120306  0.018800  0.016682  0.055672  0.026293  0.011807  0.121340  0.014186  0.123220  0.035201  0.049209  0.036293  0.024574  0.002968  0.016149  0.023811  0.063840  0.009090  0.012295  0.113437  0.008693  0.094037  0.015423  0.012067  0.027627  0.009638  0.010374  0.007336  0.009197  0.011843  0.020453  0.013020  0.018662  0.011229  0.507930  0.043881  0.008037  0.016679  0.028677  0.035909  0.015637  0.018373  0.042632  0.031185  0.143414  0.099065  0.103743  0.010902  0.023069  0.022578  0.117731  0.035868  0.050564  0.005357  0.146699  0.009178  0.885360  0.002350  0.019074  0.003228  0.002854  0.001658  0.024777  0.003400  0.009005  0.003589  0.002760  0.001926  0.002623  0.003308  0.005279  0.006605  0.010428  0.000645  0.001953 "><INPUT TYPE = SUBMIT NAME = action VALUE = 'View PSPM 2'><PRE>Time  3.05 secs.</PRE><CENTER><H3><A NAME=summary3><HR></A><A HREF=#summary_doc><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#OOFFFF><A HREF=#summary2><B>P</B></A>  <TD BGCOLOR=#FFFFOO><A HREF=#summary4><B>N</B></A></TABLE>MOTIF  3</A>  &nbsp&nbsp&nbsp width = 23     &nbsp&nbsp&nbsp sites =   2    &nbsp&nbsp&nbsp llr = 119    &nbsp&nbsp&nbsp E-value = 5.0e+000<BR CLEAR=LEFT><HR></H3></CENTER><TABLE CELLPADDING=0 CELLSPACING=1><TR><TD COLSPAN=8><TH><A NAME=simplified3 HREF=#simplified_doc>Simplified</A><TH ALIGN=RIGHT>A<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >5<TD>:<TD>:<TD>:<TD>:<TD>5<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><A HREF=#simplified_doc>pos.-specific</A><TH ALIGN=RIGHT>C<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><A HREF=#simplified_doc>probability</A><TH ALIGN=RIGHT>D<TH><TD  >:<TD>5<TD>:<TD>a<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>5<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><A HREF=#simplified_doc>matrix</A><TH ALIGN=RIGHT>E<TH><TD  >:<TD>:<TD>5<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>5<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>F<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>5<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>G<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >5<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>a</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>H<TH><TD  >:<TD>5<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>a<TD>:<TD>:<TD>5<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>I<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>5<TD>:<TD>:<TD  >:<TD>5<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>K<TH><TD  >:<TD>:<TD>:<TD>:<TD>a<TD>a<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>5<TD>:<TD  >a<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>L<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>a<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>a<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>M<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>N<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>P<TH><TD  >:<TD>:<TD>5<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>Q<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>5<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>R<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>5<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>S<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>5<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>a<TD>:<TD>a<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>T<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>5<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>V<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>5<TD  >:<TD>5<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>a<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>W<TH><TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >a<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD COLSPAN=8><TH><TH ALIGN=RIGHT>Y<TH><TD  >a<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:<TD>:<TD  >:<TD>:<TD>:<TD>:<TD>:</TR><TR><TD><FONT COLOR=#D5F0FF>.<TR><TD COLSPAN=8><TH> <A NAME=IC3>          bits    </A><TH ALIGN=RIGHT>5.9<TH><TD  ><TD><TD><TD  ><TD><TD><TD  ><TD><TD><TD  ><TD><TD><TD   BGCOLOR=BLUE>&nbsp<TD><TD><TD  ><TD><TD><TD  ><TD><TD><TD  ><TD></TR><TR><TD COLSPAN=8><TH>                  <TH ALIGN=RIGHT>5.3<TH><TD  ><TD><TD><TD  ><TD><TD><TD  ><TD BGCOLOR=PINK>&nbsp<TD><TD  ><TD><TD><TD   BGCOLOR=BLUE>&nbsp<TD><TD><TD  ><TD><TD><TD  ><TD><TD><TD  ><TD></TR><TR><TD COLSPAN=8><TH>                  <TH ALIGN=RIGHT>4.7<TH><TD  ><TD><TD><TD  ><TD><TD><TD  ><TD BGCOLOR=PINK>&nbsp<TD><TD  ><TD><TD><TD   BGCOLOR=BLUE>&nbsp<TD><TD><TD  ><TD><TD><TD  ><TD><TD><TD  ><TD></TR><TR><TD COLSPAN=8><TH>                  <TH ALIGN=RIGHT>4.1<TH><TD   BGCOLOR=TURQUOISE>&nbsp<TD><TD><TD   BGCOLOR=MAGENTA>&nbsp<TD><TD><TD  ><TD BGCOLOR=PINK>&nbsp<TD><TD  ><TD BGCOLOR=BLACK>&nbsp<TD><TD   BGCOLOR=BLUE>&nbsp<TD><TD><TD   BGCOLOR=GREEN>&nbsp<TD><
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