mast-output-example.html

来自「EM算法的改进」· HTML 代码 · 共 1,778 行 · 第 1/5 页

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 <TD><A NAME=s32></A>YURA_MYXXA <TD>no comment  <TD ALIGN=RIGHT>2.6e-13 <TD ALIGN=RIGHT>258 <TR><TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDFFDD><A HREF=#d33>D</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a33>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=s33></A>FABI_ECOLI <TD>no comment  <TD ALIGN=RIGHT>6.1e-07 <TD ALIGN=RIGHT>262</TABLE><CENTER><H3><A NAME=sec_ii><HR></A><A HREF=#sec_ii_doc></A> SECTION II: MOTIF DIAGRAMS<HR></H3></CENTER><UL><LI> The ordering and spacing of all non-overlapping motif occurrencesare shown for each high-scoring sequence listed in Section I.<LI> A motif occurrence is defined as a position in the sequence whosematch to the motif has POSITION p-value less than 0.0001.<LI> The POSITION p-value of a match is the probability ofa single random subsequence of the length of the motifscoring at least as well as the observed match.<LI> For each sequence, all motif occurrences are shown unless thereare overlaps.  In that case, a motif occurrence is shown only if itsp-value is less than the product of the p-values of the other(lower-numbered) motif occurrences that it overlaps.<LI> The table also shows the E-value of each sequence.<LI> Spacers and motif occurences are indicated by<UL><LI> <TABLE BORDER=0 CELLPADDING=0><TR ALIGN=CENTER> <TD WIDTH=10><HR SIZE=4 NOSHADE> <TD BGCOLOR=blue WIDTH=20><FONT COLOR=white> n <TD WIDTH=10><HR SIZE=4 NOSHADE></TABLE>  occurrence of motif `n' with p-value less than 0.0001.<LI> <TABLE BORDER=0 CELLPADDING=0><TR ALIGN=CENTER> <TD WIDTH=10> <HR SIZE=8 NOSHADE> <TD BGCOLOR=blue WIDTH=20><FONT COLOR=white> 1 <TD WIDTH=10> <HR SIZE=8 NOSHADE> </TABLE> Sequences longer than 1000 are not shown to scale and are indicated by thicker lines.</UL></UL><BR><TABLE BORDER=1><TR><TH>Links<TH>Name<TH>Expect<TH ALIGN=LEFT>&nbsp&nbsp Motifs<TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s1>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a1>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d1></A>YRTP_BACSU <TD ALIGN=RIGHT NOWRAP>8.9e-38 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=8><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=102><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=122><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=124><HR SIZE=4 NOSHADE>  <TD WIDTH=1392> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s2>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a2>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d2></A>BUDC_KLETE <TD ALIGN=RIGHT NOWRAP>6.8e-35 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=102><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=124><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=136><HR SIZE=4 NOSHADE>  <TD WIDTH=1386> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s3>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a3>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d3></A>HDE_CANTR <TD ALIGN=RIGHT NOWRAP>2.6e-31 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=12><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=114><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=122><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=272><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=94><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=122><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=480><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=306><HR SIZE=4 NOSHADE>  <TD WIDTH=52> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s4>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a4>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d4></A>3BHD_COMTE <TD ALIGN=RIGHT NOWRAP>8.1e-31 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=8><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=96><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=120><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=162><HR SIZE=4 NOSHADE>  <TD WIDTH=1362> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s5>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a5>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d5></A>FVT1_HUMAN <TD ALIGN=RIGHT NOWRAP>3.3e-30 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=60><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=112><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=122><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=250><HR SIZE=4 NOSHADE>  <TD WIDTH=1204> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s6>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a6>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d6></A>YINL_LISMO <TD ALIGN=RIGHT NOWRAP>6.5e-30 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=6><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=102><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=122><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=146><HR SIZE=4 NOSHADE>  <TD WIDTH=1372> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s7>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a7>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d7></A>AP27_MOUSE <TD ALIGN=RIGHT NOWRAP>6.8e-30 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=10><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=86><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=124><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=148><HR SIZE=4 NOSHADE>  <TD WIDTH=1380> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s8>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a8>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d8></A>NODG_RHIME <TD ALIGN=RIGHT NOWRAP>1.2e-29 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=8><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=96><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=122><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=144><HR SIZE=4 NOSHADE>  <TD WIDTH=1378> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s9>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a9>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d9></A>DHGB_BACME <TD ALIGN=RIGHT NOWRAP>1.6e-29 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=10><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=106><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=126><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=162><HR SIZE=4 NOSHADE>  <TD WIDTH=1344> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s10>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a10>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d10></A>BA72_EUBSP <TD ALIGN=RIGHT NOWRAP>5.4e-29 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=8><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=106><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=122><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=142><HR SIZE=4 NOSHADE>  <TD WIDTH=1370> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s11>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a11>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d11></A>HDHA_ECOLI <TD ALIGN=RIGHT NOWRAP>8.9e-29 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=18><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=102><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=120><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=150><HR SIZE=4 NOSHADE>  <TD WIDTH=1358> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s12>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a12>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d12></A>DHES_HUMAN <TD ALIGN=RIGHT NOWRAP>4.2e-28 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=110><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=122><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=302><HR SIZE=4 NOSHADE>  <TD WIDTH=1214> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s13>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a13>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d13></A>DHCA_HUMAN <TD ALIGN=RIGHT NOWRAP>5.8e-28 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=4><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=104><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=200><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=124><HR SIZE=4 NOSHADE>  <TD WIDTH=1316> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s14>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a14>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d14></A>BPHB_PSEPS <TD ALIGN=RIGHT NOWRAP>1e-27 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=6><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=94><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=128><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=202><HR SIZE=4 NOSHADE>  <TD WIDTH=1318> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s15>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a15>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d15></A>2BHD_STREX <TD ALIGN=RIGHT NOWRAP>2.2e-27 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=8><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=96><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=122><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=164><HR SIZE=4 NOSHADE>  <TD WIDTH=1358> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s16>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a16>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d16></A>DHII_HUMAN <TD ALIGN=RIGHT NOWRAP>4.1e-27 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=64><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=104><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=120><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=176><HR SIZE=4 NOSHADE>  <TD WIDTH=1284> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s17>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a17>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d17></A>FIXR_BRAJA <TD ALIGN=RIGHT NOWRAP>9.8e-27 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=68><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=98><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=134><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=136><HR SIZE=4 NOSHADE>  <TD WIDTH=1312> </TABLE><TR> <TD><TABLE ALIGN=LEFT CELLSPACING=0><TR>  <TD BGCOLOR=#DDDD88><A HREF=#s18>S</A>  <TD BGCOLOR=#FFDDDD><A HREF=#a18>A</A>  <TD BGCOLOR=#FFFFFF><A HREF=#bh>?</A></TABLE> <TD><A NAME=d18></A>HMTR_LEIMA <TD ALIGN=RIGHT NOWRAP>1.8e-26 <TD><TABLE WIDTH=1872 BORDER=0 ALIGN=LEFT CELLSPACING=0 CELLPADDING=0><TR ALIGN=CENTER>  <TD WIDTH=8><HR SIZE=4 NOSHADE>  <TD BGCOLOR=blue WIDTH=50><FONT COLOR=white>2  <TD WIDTH=140><HR SIZE=4 NOSHADE>  <TD BGCOLOR=red WIDTH=30><FONT COLOR=white>3  <TD WIDTH=160><HR SIZE=4 NOSHADE>  <TD BGCOLOR=aqua WIDTH=44>1  <TD WIDTH=146><HR SIZE=4 NOSHADE>  <TD WIDTH=1294> </TABLE>
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