mast.adh.zoops

EM算法的改进

2BHD_STREX
  20-BETA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.53)
  LENGTH = 255  COMBINED P-VALUE = 1.14e-24  E-VALUE =  3.7e-23
  DIAGRAM: 4_[2]_122_[1]_77

         [2]
         4.8e-14
         QGKVVLITGCSSGIGKATAKHLHKE
         +++ +++++++++++ + +++ +++
1    MNDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAR

      [1]
      7.5e-18
      YSASKFAVRMLTRSMRREYAPHGIRVN
      +++++++++++++ +++++++ +++++
151  SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL


BDH_HUMAN
  D-BETA-HYDROXYBUTYRATE DEHYDROGENASE PRECURSOR (EC 1.1.1.30) (BDH) 
  (3-HYDROXYBUTYRATE DEHYDROGENASE) (FRAGMENT)
  LENGTH = 343  COMBINED P-VALUE = 2.28e-24  E-VALUE =  7.5e-23
  DIAGRAM: 53_[2]_129_[1]_109

                                                          [2]
                                                          3.5e-16
                                                          QGKVVLITGCSSGIGKATAKHL
                                                           ++ +++++++++ ++++++++
1    GLRPPPPGRFSRLPGKTLSACDRENGARRPLLLGSTSFIPIGRRTYASAAEPVGSKAVLVTGCDSGFGFSLAKHL

     
     
     HKE
     +++
76   HSKGFLVFAGCLMKDKGHDGVKELDSLNSDRLRTVQLNVFRSEEVEKVVGDCPFEPEGPEKGMWGLVNNAGISTF

                                                              [1]
                                                              1.1e-15
                                                              YSASKFAVRMLTRSMRRE
                                                              ++ +++++++++++++++
151  GEVEFTSLETYKQVAEVNLWGTVRMTKSFLPLIRRAKGRVVNISSMLGRMANPARSPYCITKFGVEAFSDCLRYE

     
     
     YAPHGIRVN
     +++++++++
226  MYPLGVKVSVVEPGNFIAATSLYNPESIQAIAKKMWEELPEVVRKDYGKKYFDEKIAKMETYCSSGSTDTSPVID


DHES_HUMAN
  ESTRADIOL 17 BETA-DEHYDROGENASE (EC 1.1.1.62) (20 ALPHA-HYDROXYSTEROID 
  DEHYDROGENASE) (E2DH) (17-BETA-HSD) (PLACENTAL 17-BETA-HYDROXYSTEROID 
  DEHYDROGENASE)
  LENGTH = 327  COMBINED P-VALUE = 9.59e-24  E-VALUE =  3.2e-22
  DIAGRAM: [2]_129_[1]_146

     [2]
     3.3e-15
     QGKVVLITGCSSGIGKATAKHLHKE
        ++++++++++++++++ +++++
1    ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAA

         [1]
         5.4e-16
         YSASKFAVRMLTRSMRREYAPHGIRVN
         +++++++++++++++++ + + +++ +
151  FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV


GUTD_ECOLI
  SORBITOL-6-PHOSPHATE 2-DEHYDROGENASE (EC 1.1.1.140) (GLUCITOL-6- PHOSPHATE 
  DEHYDROGENASE) (KETOSEPHOSPHATE REDUCTASE)
  LENGTH = 259  COMBINED P-VALUE = 1.80e-23  E-VALUE =  5.9e-22
  DIAGRAM: [2]_128_[1]_79

     [2]
     3.5e-12
     QGKVVLITGCSSGIGKATAKHLHKE
     +++++++ ++++ ++  +++ ++++
1    MNQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSCLALSRGV

        [1]
        1.6e-18
        YSASKFAVRMLTRSMRREYAPHGIRVN
        +++++++  ++++++++++++++++++
151  NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGC


DHB3_HUMAN
  no comment
  LENGTH = 310  COMBINED P-VALUE = 2.28e-23  E-VALUE =  7.5e-22
  DIAGRAM: 46_[2]_126_[1]_86

                                                   [2]
                                                   1.7e-16
                                                   QGKVVLITGCSSGIGKATAKHLHKE
                                                   +++++++++++ +++++++ +++++
1    MGDVLEQFFILTGLLVCLACLAKCVRFSRCVLLNYYKVLPKSFLRSMGQWAVITGAGDGIGKAYSFELAKRGLNV

                                                    [1]
                                                    2.8e-14
                                                    YSASKFAVRMLTRSMRREYAPHGIRVN
                                                    ++++++++++++++++ +++ + + ++
151  QSLIHCNITSVVKMTQLILKHMESRQKGLILNISSGIALFPWPLYSMYSASKAFVCAFSKALQEEYKAKEVIIQV


BPHB_PSEPS
  BIPHENYL-CIS-DIOL DEHYDROGENASE (EC 1.3.1.-)
  LENGTH = 275  COMBINED P-VALUE = 1.63e-21  E-VALUE =  5.4e-20
  DIAGRAM: 3_[2]_124_[1]_96

        [2]
        8.3e-16
        QGKVVLITGCSSGIGKATAKHLHKE
        ++  +++++++++++++++ +++++
1    MKLKGEAVLITGGASGLGRALVDRFVAEAKVAVLDKSAERLAELETDLGDNVLGIVGDVRSLEDQKQAASRCVAR

       [1]
       5.9e-13
       YSASKFAVRMLTRSMRREYAPHGIRVN
       ++++++++ +++++++++++++  +
151  PLYTAAKQAIVGLVRELAFELAPYVRVNGVGPGGMNSDMRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEE


LIGD_PSEPA
  C ALPHA-DEHYDROGENASE (EC -.-.-.-)
  LENGTH = 305  COMBINED P-VALUE = 3.21e-21  E-VALUE =  1.1e-19
  DIAGRAM: 4_[2]_127_[1]_122

         [2]
         9.8e-14
         QGKVVLITGCSSGIGKATAKHLHKE
         +++++ +++++++ ++ +++ + ++
1    MKDFQDQVAFITGGASGAGFGQAKVFGQAGAKIVVADVRAEAVEKAVAELEGLGITAHGIVLDIMDREAYARAAD

           [1]
           8.0e-15
           YSASKFAVRMLTRSMRREYAPHGIRVN
           +++++++ +++++ +++ + ++++ ++
151  SALAGPYSAAKAASINLMEGYRQGLEKYGIGVSVCTPANIKSNIAEASRLRPAKYGTSGYVENEESIASLHSIHQ


RFBB_NEIGO
  no comment
  LENGTH = 346  COMBINED P-VALUE = 3.22e-20  E-VALUE =  1.1e-18
  DIAGRAM: 4_[2]_135_[1]_155

         [2]
         1.7e-13
         QGKVVLITGCSSGIGKATAKHLHKE
          +++++++++++ ++ + +++ +++
1    MQTEGKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRVF

                   [1]
                   3.7e-14
                   YSASKFAVRMLTRSMRREYAPHGIRVN
                   +++++++ +++++++++ ++   ++ +
151  DLFTETTPYAPSSPYSASKAAADHLVRAWQRTYRLPSIVSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYGDG


DHCA_HUMAN
  no comment
  LENGTH = 276  COMBINED P-VALUE = 2.12e-18  E-VALUE =    7e-17
  DIAGRAM: 2_[2]_34_[1]_104_[1]_57

       [2]                                                        [1]
       1.1e-15                                                    2.5e-05
       QGKVVLITGCSSGIGKATAKHLHKE                                  YSASKFAVRMLTRS
         ++++++++++++++++++++++                                        ++++++ +
1    SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF

     
     
     MRREYAPHGIRVN
     ++++++ + + ++
76   LRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCS

                                               [1]
                                               6.7e-10
                                               YSASKFAVRMLTRSMRREYAPHGIRVN
                                               ++ ++ +++ +++ +++ +++++
151  PELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNAC


MAS1_AGRRA
  no comment
  LENGTH = 476  COMBINED P-VALUE = 2.57e-17  E-VALUE =  8.5e-16
  DIAGRAM: 243_[2]_123_[1]_58


                       [2]
                       1.3e-14
                       QGKVVLITGCSSGIGKATAKHLHKE
                       +++++++ +++++++++++++++++
226  GRVLHFRRGFSHWTVEIHQSPVILVSGSNRGVGKAIAEDLIAHGYRLSLGARKVKDLEVAFGPQDEWLHYARFDA

                     [1]
                     2.4e-10
                     YSASKFAVRMLTRSMRREYAPHGIRVN
                     + ++++++ ++++++++  + +++
376  NINSMSGQRVLNPLVGYNMTKHALGGLTKTTQHVGWDRRCAAIDICLGFVATDMSAWTDLIASKDMIQPEDIAKL


PCR_PEA
  no comment
  LENGTH = 399  COMBINED P-VALUE = 3.93e-17  E-VALUE =  1.3e-15
  DIAGRAM: 84_[2]_34_[1]_229


              [2]                                                        [1]
              7.6e-16                                                    8.7e-09
              QGKVVLITGCSSGIGKATAKHLHKE                                  YSASKFA
               + ++++++++++++++++++++++                                    ++  +
76   SSSEGKKTLRKGNVVITGASSGLGLATAKALAESGKWHVIMACRDYLKAARAAKSAGLAKENYTIMHLDLASLDS

     
     
     VRMLTRSMRREYAPHGIRVN
     +++++++ +++ +++ + ++
151  VRQFVDNFRRSEMPLDVLINNAAVYFPTAKEPSFTADGFEISVGTNHLGHFLLSRLLLEDLKKSDYPSKRLIIVG


ADH_DROME
  ALCOHOL DEHYDROGENASE (EC 1.1.1.1)
  LENGTH = 255  COMBINED P-VALUE = 2.47e-16  E-VALUE =  8.2e-15
  DIAGRAM: 4_[2]_122_[1]_77

         [2]
         1.1e-11
         QGKVVLITGCSSGIGKATAKHLHKE
         ++++++   + +++++ ++++++++
1    SFTLTNKNVIFVAGLGGIGLDTSKELLKRDLKNLVILDRIENPAAIAELKAINPKVTVTFYPYDVTVPIAETTKL

      [1]
      1.0e-11
      YSASKFAVRMLTRSMRREYAPHGIRVN
      ++ +++++ ++++++++    ++++ +
151  VYSGTKAAVVNFTSSLAKLAPITGVTAYTVNPGITRTTLVHKFNSWLDVEPQVAEKLLAHPTQPSLACAENFVKA


YURA_MYXXA
  no comment
  LENGTH = 258  COMBINED P-VALUE = 7.99e-14  E-VALUE =  2.6e-12
  DIAGRAM: 159_[1]_72


              [1]
              3.2e-17
              YSASKFAVRMLTRSMRREYAPHGIRVN
              +++++++++ ++++++++++ ++++++
151  GFRGLPATRYSASKAFLSTFMESLRVDLRGTGVRVTCIYPGFVKSELTATNNFPMPFLMETHDAVELMGKGIVRG


FABI_ECOLI
  no comment
  LENGTH = 262  COMBINED P-VALUE = 2.73e-11  E-VALUE =    9e-10
  DIAGRAM: 4_[2]_129_[1]_77

         [2]
         2.4e-06
         QGKVVLITGCSSGIGKATAKHLHKE
         +++ +++++ ++ +  ++ ++ + +
1    MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMF

             [1]
             7.0e-12
             YSASKFAVRMLTRSMRREYAPHGIRVN
             ++ +++++++ +++++  +++++++++
151  RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDV


CSGA_MYXXA
  no comment
  LENGTH = 166  COMBINED P-VALUE = 1.81e-09  E-VALUE =    6e-08
  DIAGRAM: 87_[1]_52


                 [1]
                 2.6e-12
                 YSASKFAVRMLTRSMRREYAPHGIRVN
                 + ++++++ + ++++  ++++++ +
76   SLAANTDGGAYAYRMSKAALNMAVRSMSTDLRPEGFVTVLLHPGWVQTDMGGPDATLPAPDSVRGMLRVIDGLNP

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CPU: rocks-155.sdsc.edu
Time 0.022996 secs.

mast meme.adh.zoops