config.status

EM算法的改进

  "website/images/Makefile" ) CONFIG_FILES="$CONFIG_FILES website/images/Makefile" ;;
  "depfiles" ) CONFIG_COMMANDS="$CONFIG_COMMANDS depfiles" ;;
  "config.h" ) CONFIG_HEADERS="$CONFIG_HEADERS config.h" ;;
  *) { { echo "$as_me:$LINENO: error: invalid argument: $ac_config_target" >&5
echo "$as_me: error: invalid argument: $ac_config_target" >&2;}
   { (exit 1); exit 1; }; };;
  esac
done

# If the user did not use the arguments to specify the items to instantiate,
# then the envvar interface is used.  Set only those that are not.
# We use the long form for the default assignment because of an extremely
# bizarre bug on SunOS 4.1.3.
if $ac_need_defaults; then
  test "${CONFIG_FILES+set}" = set || CONFIG_FILES=$config_files
  test "${CONFIG_HEADERS+set}" = set || CONFIG_HEADERS=$config_headers
  test "${CONFIG_COMMANDS+set}" = set || CONFIG_COMMANDS=$config_commands
fi

# Have a temporary directory for convenience.  Make it in the build tree
# simply because there is no reason to put it here, and in addition,
# creating and moving files from /tmp can sometimes cause problems.
# Create a temporary directory, and hook for its removal unless debugging.
$debug ||
{
  trap 'exit_status=$?; rm -rf $tmp && exit $exit_status' 0
  trap '{ (exit 1); exit 1; }' 1 2 13 15
}

# Create a (secure) tmp directory for tmp files.

{
  tmp=`(umask 077 && mktemp -d -q "./confstatXXXXXX") 2>/dev/null` &&
  test -n "$tmp" && test -d "$tmp"
}  ||
{
  tmp=./confstat$$-$RANDOM
  (umask 077 && mkdir $tmp)
} ||
{
   echo "$me: cannot create a temporary directory in ." >&2
   { (exit 1); exit 1; }
}


#
# CONFIG_FILES section.
#

# No need to generate the scripts if there are no CONFIG_FILES.
# This happens for instance when ./config.status config.h
if test -n "$CONFIG_FILES"; then
  # Protect against being on the right side of a sed subst in config.status.
  sed 's/,@/@@/; s/@,/@@/; s/,;t t$/@;t t/; /@;t t$/s/[\\&,]/\\&/g;
   s/@@/,@/; s/@@/@,/; s/@;t t$/,;t t/' >$tmp/subs.sed <<\CEOF
s,@SHELL@,/bin/sh,;t t
s,@PATH_SEPARATOR@,:,;t t
s,@PACKAGE_NAME@,,;t t
s,@PACKAGE_TARNAME@,,;t t
s,@PACKAGE_VERSION@,,;t t
s,@PACKAGE_STRING@,,;t t
s,@PACKAGE_BUGREPORT@,,;t t
s,@exec_prefix@,${prefix},;t t
s,@prefix@,/root,;t t
s,@program_transform_name@,s,x,x,,;t t
s,@bindir@,${exec_prefix}/bin,;t t
s,@sbindir@,${exec_prefix}/sbin,;t t
s,@libexecdir@,${exec_prefix}/libexec,;t t
s,@datadir@,${prefix}/share,;t t
s,@sysconfdir@,${prefix}/etc,;t t
s,@sharedstatedir@,${prefix}/com,;t t
s,@localstatedir@,${prefix}/var,;t t
s,@libdir@,${exec_prefix}/lib,;t t
s,@includedir@,${prefix}/include,;t t
s,@oldincludedir@,/usr/include,;t t
s,@infodir@,${prefix}/info,;t t
s,@mandir@,${prefix}/man,;t t
s,@build_alias@,,;t t
s,@host_alias@,,;t t
s,@target_alias@,,;t t
s,@DEFS@,-DHAVE_CONFIG_H,;t t
s,@ECHO_C@,,;t t
s,@ECHO_N@,-n,;t t
s,@ECHO_T@,,;t t
s,@LIBS@,-lm ,;t t
s,@INSTALL_PROGRAM@,${INSTALL},;t t
s,@INSTALL_SCRIPT@,${INSTALL},;t t
s,@INSTALL_DATA@,${INSTALL} -m 644,;t t
s,@PACKAGE@,meme,;t t
s,@VERSION@,3.5.4,;t t
s,@ACLOCAL@,${SHELL} /mnt/hgfs/linuxshare/meme_3.5.4/config/missing --run aclocal-1.6,;t t
s,@AUTOCONF@,${SHELL} /mnt/hgfs/linuxshare/meme_3.5.4/config/missing --run autoconf,;t t
s,@AUTOMAKE@,${SHELL} /mnt/hgfs/linuxshare/meme_3.5.4/config/missing --run automake-1.6,;t t
s,@AUTOHEADER@,${SHELL} /mnt/hgfs/linuxshare/meme_3.5.4/config/missing --run autoheader,;t t
s,@MAKEINFO@,${SHELL} /mnt/hgfs/linuxshare/meme_3.5.4/config/missing --run makeinfo,;t t
s,@AMTAR@,${SHELL} /mnt/hgfs/linuxshare/meme_3.5.4/config/missing --run tar,;t t
s,@install_sh@,/mnt/hgfs/linuxshare/meme_3.5.4/config/install-sh,;t t
s,@STRIP@,,;t t
s,@ac_ct_STRIP@,,;t t
s,@INSTALL_STRIP_PROGRAM@,${SHELL} $(install_sh) -c -s,;t t
s,@AWK@,gawk,;t t
s,@SET_MAKE@,,;t t
s,@CC@,gcc,;t t
s,@CFLAGS@,-Wall -DUNIX -D__USE_FIXED_PROTOTYPES__  -O3,;t t
s,@LDFLAGS@,,;t t
s,@CPPFLAGS@,,;t t
s,@ac_ct_CC@,gcc,;t t
s,@EXEEXT@,,;t t
s,@OBJEXT@,o,;t t
s,@DEPDIR@,.deps,;t t
s,@am__include@,include,;t t
s,@am__quote@,,;t t
s,@AMDEP_TRUE@,,;t t
s,@AMDEP_FALSE@,#,;t t
s,@AMDEPBACKSLASH@,\,;t t
s,@CCDEPMODE@,depmode=gcc3,;t t
s,@RANLIB@,ranlib,;t t
s,@ac_ct_RANLIB@,ranlib,;t t
s,@build@,i686-pc-linux-gnu,;t t
s,@build_cpu@,i686,;t t
s,@build_vendor@,pc,;t t
s,@build_os@,linux-gnu,;t t
s,@host@,i686-pc-linux-gnu,;t t
s,@host_cpu@,i686,;t t
s,@host_vendor@,pc,;t t
s,@host_os@,linux-gnu,;t t
s,@LD@,/usr/bin/ld,;t t
s,@SED@,/bin/sed,;t t
s,@MPICC@,,;t t
s,@MAIL@,/bin/mail,;t t
s,@SENDMAIL@,/usr/sbin/sendmail,;t t
s,@PERL@,/usr/bin/perl,;t t
s,@QSTAT@,,;t t
s,@CPP@,gcc -E,;t t
s,@EGREP@,grep -E,;t t
s,@LIBOBJS@, lstat$U.o,;t t
s,@WANT_STRLCPY_TRUE@,,;t t
s,@WANT_STRLCPY_FALSE@,#,;t t
s,@WANT_STARTUP_TRUE@,,;t t
s,@WANT_STARTUP_FALSE@,#,;t t
s,@WANT_DARWIN_TRUE@,#,;t t
s,@WANT_DARWIN_FALSE@,,;t t
s,@PARALLEL_TRUE@,#,;t t
s,@PARALLEL_FALSE@,,;t t
s,@SERVER_TRUE@,,;t t
s,@SERVER_FALSE@,#,;t t
s,@CLIENT_TRUE@,,;t t
s,@CLIENT_FALSE@,#,;t t
s,@WEBSITE_TRUE@,#,;t t
s,@WEBSITE_FALSE@,,;t t
s,@MEME_DIRECTORY@,${prefix},;t t
s,@MACHID@,linux,;t t
s,@MEME_PORT@,3012,;t t
s,@MAST_PORT@,3013,;t t
s,@DEBUG_FLAGS@,,;t t
s,@OPT_FLAGS@,-O3,;t t
s,@MPIINC@,,;t t
s,@MPI_CMD@,,;t t
s,@MPILIBDIR@,,;t t
s,@MPIFLAGS@,-DPARALLEL -O,;t t
s,@MPITYPE@,,;t t
s,@LAMBIN@,,;t t
s,@URL@,http://localhost.localdomain/meme,;t t
s,@CONTACT@,[e-mail],;t t
s,@MEME_USER@,root,;t t
s,@HOSTNAME@,localhost.localdomain,;t t
s,@SERVER@,,;t t
s,@WEBDIR@,${prefix}/web,;t t
s,@MEME_DB@,${prefix}/db,;t t
s,@MEME_LOGS@,${prefix}/LOGS,;t t
s,@QTYPE@,,;t t
s,@NPROCS@,2,;t t
s,@MAXTIME@,7200,;t t
s,@QNAME@,,;t t
s,@LTLIBOBJS@, lstat$U.lo,;t t
CEOF

  # Split the substitutions into bite-sized pieces for seds with
  # small command number limits, like on Digital OSF/1 and HP-UX.
  ac_max_sed_lines=48
  ac_sed_frag=1 # Number of current file.
  ac_beg=1 # First line for current file.
  ac_end=$ac_max_sed_lines # Line after last line for current file.
  ac_more_lines=:
  ac_sed_cmds=
  while $ac_more_lines; do
    if test $ac_beg -gt 1; then
      sed "1,${ac_beg}d; ${ac_end}q" $tmp/subs.sed >$tmp/subs.frag
    else
      sed "${ac_end}q" $tmp/subs.sed >$tmp/subs.frag
    fi
    if test ! -s $tmp/subs.frag; then
      ac_more_lines=false
    else
      # The purpose of the label and of the branching condition is to
      # speed up the sed processing (if there are no `@' at all, there
      # is no need to browse any of the substitutions).
      # These are the two extra sed commands mentioned above.
      (echo ':t
  /@[a-zA-Z_][a-zA-Z_0-9]*@/!b' && cat $tmp/subs.frag) >$tmp/subs-$ac_sed_frag.sed
      if test -z "$ac_sed_cmds"; then
  	ac_sed_cmds="sed -f $tmp/subs-$ac_sed_frag.sed"
      else
  	ac_sed_cmds="$ac_sed_cmds | sed -f $tmp/subs-$ac_sed_frag.sed"
      fi
      ac_sed_frag=`expr $ac_sed_frag + 1`
      ac_beg=$ac_end
      ac_end=`expr $ac_end + $ac_max_sed_lines`
    fi
  done
  if test -z "$ac_sed_cmds"; then
    ac_sed_cmds=cat
  fi
fi # test -n "$CONFIG_FILES"

for ac_file in : $CONFIG_FILES; do test "x$ac_file" = x: && continue
  # Support "outfile[:infile[:infile...]]", defaulting infile="outfile.in".
  case $ac_file in
  - | *:- | *:-:* ) # input from stdin
        cat >$tmp/stdin
        ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
        ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
  *:* ) ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
        ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
  * )   ac_file_in=$ac_file.in ;;
  esac

  # Compute @srcdir@, @top_srcdir@, and @INSTALL@ for subdirectories.
  ac_dir=`(dirname "$ac_file") 2>/dev/null ||
$as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
         X"$ac_file" : 'X\(//\)[^/]' \| \
         X"$ac_file" : 'X\(//\)$' \| \
         X"$ac_file" : 'X\(/\)' \| \
         .     : '\(.\)' 2>/dev/null ||
echo X"$ac_file" |
    sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
  	  /^X\(\/\/\)[^/].*/{ s//\1/; q; }
  	  /^X\(\/\/\)$/{ s//\1/; q; }
  	  /^X\(\/\).*/{ s//\1/; q; }
  	  s/.*/./; q'`
  { if $as_mkdir_p; then
    mkdir -p "$ac_dir"
  else
    as_dir="$ac_dir"
    as_dirs=
    while test ! -d "$as_dir"; do
      as_dirs="$as_dir $as_dirs"
      as_dir=`(dirname "$as_dir") 2>/dev/null ||
$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
         X"$as_dir" : 'X\(//\)[^/]' \| \
         X"$as_dir" : 'X\(//\)$' \| \
         X"$as_dir" : 'X\(/\)' \| \
         .     : '\(.\)' 2>/dev/null ||
echo X"$as_dir" |
    sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{ s//\1/; q; }
  	  /^X\(\/\/\)[^/].*/{ s//\1/; q; }
  	  /^X\(\/\/\)$/{ s//\1/; q; }
  	  /^X\(\/\).*/{ s//\1/; q; }
  	  s/.*/./; q'`
    done
    test ! -n "$as_dirs" || mkdir $as_dirs
  fi || { { echo "$as_me:$LINENO: error: cannot create directory \"$ac_dir\"" >&5
echo "$as_me: error: cannot create directory \"$ac_dir\"" >&2;}
   { (exit 1); exit 1; }; }; }

  ac_builddir=.

if test "$ac_dir" != .; then
  ac_dir_suffix=/`echo "$ac_dir" | sed 's,^\.[\\/],,'`
  # A "../" for each directory in $ac_dir_suffix.
  ac_top_builddir=`echo "$ac_dir_suffix" | sed 's,/[^\\/]*,../,g'`
else
  ac_dir_suffix= ac_top_builddir=
fi

case $srcdir in
  .)  # No --srcdir option.  We are building in place.
    ac_srcdir=.
    if test -z "$ac_top_builddir"; then
       ac_top_srcdir=.
    else
       ac_top_srcdir=`echo $ac_top_builddir | sed 's,/$,,'`
    fi ;;
  [\\/]* | ?:[\\/]* )  # Absolute path.
    ac_srcdir=$srcdir$ac_dir_suffix;
    ac_top_srcdir=$srcdir ;;
  *) # Relative path.
    ac_srcdir=$ac_top_builddir$srcdir$ac_dir_suffix
    ac_top_srcdir=$ac_top_builddir$srcdir ;;
esac
# Don't blindly perform a `cd "$ac_dir"/$ac_foo && pwd` since $ac_foo can be
# absolute.
ac_abs_builddir=`cd "$ac_dir" && cd $ac_builddir && pwd`
ac_abs_top_builddir=`cd "$ac_dir" && cd ${ac_top_builddir}. && pwd`
ac_abs_srcdir=`cd "$ac_dir" && cd $ac_srcdir && pwd`
ac_abs_top_srcdir=`cd "$ac_dir" && cd $ac_top_srcdir && pwd`


  case $INSTALL in
  [\\/$]* | ?:[\\/]* ) ac_INSTALL=$INSTALL ;;
  *) ac_INSTALL=$ac_top_builddir$INSTALL ;;
  esac

  if test x"$ac_file" != x-; then
    { echo "$as_me:$LINENO: creating $ac_file" >&5
echo "$as_me: creating $ac_file" >&6;}
    rm -f "$ac_file"
  fi
  # Let's still pretend it is `configure' which instantiates (i.e., don't
  # use $as_me), people would be surprised to read:
  #    /* config.h.  Generated by config.status.  */
  if test x"$ac_file" = x-; then
    configure_input=
  else
    configure_input="$ac_file.  "
  fi
  configure_input=$configure_input"Generated from `echo $ac_file_in |
                                     sed 's,.*/,,'` by configure."

  # First look for the input files in the build tree, otherwise in the
  # src tree.
  ac_file_inputs=`IFS=:
    for f in $ac_file_in; do
      case $f in
      -) echo $tmp/stdin ;;
      [\\/$]*)
         # Absolute (can't be DOS-style, as IFS=:)
         test -f "$f" || { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
echo "$as_me: error: cannot find input file: $f" >&2;}
   { (exit 1); exit 1; }; }
         echo $f;;
      *) # Relative
         if test -f "$f"; then
           # Build tree
           echo $f
         elif test -f "$srcdir/$f"; then
           # Source tree
           echo $srcdir/$f
         else
           # /dev/null tree
           { { echo "$as_me:$LINENO: error: cannot find input file: $f" >&5
echo "$as_me: error: cannot find input file: $f" >&2;}
   { (exit 1); exit 1; }; }
         fi;;
      esac
    done` || { (exit 1); exit 1; }
  sed "/^[ 	]*VPATH[ 	]*=/{
s/:*\$(srcdir):*/:/;
s/:*\${srcdir}:*/:/;
s/:*@srcdir@:*/:/;
s/^\([^=]*=[ 	]*\):*/\1/;
s/:*$//;
s/^[^=]*=[ 	]*$//;
}

:t
/@[a-zA-Z_][a-zA-Z_0-9]*@/!b
s,@configure_input@,$configure_input,;t t
s,@srcdir@,$ac_srcdir,;t t
s,@abs_srcdir@,$ac_abs_srcdir,;t t
s,@top_srcdir@,$ac_top_srcdir,;t t
s,@abs_top_srcdir@,$ac_abs_top_srcdir,;t t
s,@builddir@,$ac_builddir,;t t
s,@abs_builddir@,$ac_abs_builddir,;t t
s,@top_builddir@,$ac_top_builddir,;t t
s,@abs_top_builddir@,$ac_abs_top_builddir,;t t
s,@INSTALL@,$ac_INSTALL,;t t
" $ac_file_inputs | (eval "$ac_sed_cmds") >$tmp/out
  rm -f $tmp/stdin
  if test x"$ac_file" != x-; then
    mv $tmp/out $ac_file
  else
    cat $tmp/out
    rm -f $tmp/out
  fi

done

#
# CONFIG_HEADER section.
#

# These sed commands are passed to sed as "A NAME B NAME C VALUE D", where
# NAME is the cpp macro being defined and VALUE is the value it is being given.
#
# ac_d sets the value in "#define NAME VALUE" lines.
ac_dA='s,^\([ 	]*\)#\([ 	]*define[ 	][ 	]*\)'
ac_dB='[ 	].*$,\1#\2'
ac_dC=' '
ac_dD=',;t'
# ac_u turns "#undef NAME" without trailing blanks into "#define NAME VALUE".
ac_uA='s,^\([ 	]*\)#\([ 	]*\)undef\([ 	][ 	]*\)'
ac_uB='$,\1#\2define\3'
ac_uC=' '
ac_uD=',;t'

for ac_file in : $CONFIG_HEADERS; do test "x$ac_file" = x: && continue
  # Support "outfile[:infile[:infile...]]", defaulting infile="outfile.in".
  case $ac_file in
  - | *:- | *:-:* ) # input from stdin
        cat >$tmp/stdin
        ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
        ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
  *:* ) ac_file_in=`echo "$ac_file" | sed 's,[^:]*:,,'`
        ac_file=`echo "$ac_file" | sed 's,:.*,,'` ;;
  * )   ac_file_in=$ac_file.in ;;
  esac

  test x"$ac_file" != x- && { echo "$as_me:$LINENO: creating $ac_file" >&5