📄 arffloader.java
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/* * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation; either version 2 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, write to the Free Software * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA. *//* * ArffLoader.java * Copyright (C) 2000 Mark Hall * */package weka.core.converters;import weka.core.Instance;import weka.core.Instances;import java.io.BufferedReader;import java.io.File;import java.io.FileInputStream;import java.io.FileNotFoundException;import java.io.IOException;import java.io.InputStream;import java.io.InputStreamReader;import java.io.Reader;import java.net.URL;import java.util.zip.GZIPInputStream;/** <!-- globalinfo-start --> * Reads a source that is in arff (attribute relation file format) format. * <p/> <!-- globalinfo-end --> * * @author Mark Hall (mhall@cs.waikato.ac.nz) * @version $Revision: 1.15 $ * @see Loader */public class ArffLoader extends AbstractFileLoader implements BatchConverter, IncrementalConverter, URLSourcedLoader { /** for serialization */ static final long serialVersionUID = 2726929550544048587L; /** the file extension */ public static String FILE_EXTENSION = Instances.FILE_EXTENSION; /** the extension for compressed files */ public static String FILE_EXTENSION_COMPRESSED = FILE_EXTENSION + ".gz"; /** the url */ protected String m_URL = "http://"; /** * The reader for the source file. */ private transient Reader m_sourceReader = null; /** * Returns a string describing this Loader * @return a description of the Loader suitable for * displaying in the explorer/experimenter gui */ public String globalInfo() { return "Reads a source that is in arff (attribute relation file format) " +"format. "; } /** * Get the file extension used for arff files * * @return the file extension */ public String getFileExtension() { return FILE_EXTENSION; } /** * Gets all the file extensions used for this type of file * * @return the file extensions */ public String[] getFileExtensions() { return new String[]{FILE_EXTENSION, FILE_EXTENSION_COMPRESSED}; } /** * Returns a description of the file type. * * @return a short file description */ public String getFileDescription() { return "Arff data files"; } /** * Resets the Loader ready to read a new data set * * @throws IOException if something goes wrong */ public void reset() throws IOException { m_structure = null; setRetrieval(NONE); if (m_File != null && (new File(m_File)).isFile()) { setFile(new File(m_File)); } else if (m_URL != null & !m_URL.equals("http://")) { setURL(m_URL); } } /** * Resets the Loader object and sets the source of the data set to be * the supplied url. * * @param url the source url. * @throws IOException if an error occurs */ public void setSource(URL url) throws IOException { m_structure = null; setRetrieval(NONE); setSource(url.openStream()); m_URL = url.toString(); } /** * get the File specified as the source * * @return the source file */ public File retrieveFile() { return new File(m_File); } /** * sets the source File * * @param file the source file * @throws IOException if an error occurs */ public void setFile(File file) throws IOException { m_File = file.getAbsolutePath(); setSource(file); } /** * Resets the Loader object and sets the source of the data set to be * the supplied File object. * * @param file the source file. * @throws IOException if an error occurs */ public void setSource(File file) throws IOException { m_structure = null; setRetrieval(NONE); if (file == null) throw new IOException("Source file object is null!"); try { if (file.getName().endsWith(FILE_EXTENSION_COMPRESSED)) setSource(new GZIPInputStream(new FileInputStream(file))); else setSource(new FileInputStream(file)); } catch (FileNotFoundException ex) { throw new IOException("File not found"); } m_sourceFile = file; m_File = file.getAbsolutePath(); } /** * Set the url to load from * * @param url the url to load from * @throws IOException if the url can't be set. */ public void setURL(String url) throws IOException { m_URL = url; setSource(new URL(url)); } /** * Return the current url * * @return the current url */ public String retrieveURL() { return m_URL; } /** * Resets the Loader object and sets the source of the data set to be * the supplied InputStream. * * @param in the source InputStream. * @throws IOException always thrown. */ public void setSource(InputStream in) throws IOException { // m_File = null; m_File = (new File(System.getProperty("user.dir"))). getAbsolutePath(); m_URL = "http://"; m_sourceReader = new BufferedReader(new InputStreamReader(in)); } /** * Determines and returns (if possible) the structure (internally the * header) of the data set as an empty set of instances. * * @return the structure of the data set as an empty set of Instances * @throws IOException if an error occurs */ public Instances getStructure() throws IOException { if (m_sourceReader == null) { throw new IOException("No source has been specified"); } if (m_structure == null) { try { m_structure = new Instances(m_sourceReader, 1); } catch (Exception ex) { throw new IOException("Unable to determine structure as arff (Reason: " + ex.toString() + ")."); } } return new Instances(m_structure, 0); } /** * Return the full data set. If the structure hasn't yet been determined * by a call to getStructure then method should do so before processing * the rest of the data set. * * @return the structure of the data set as an empty set of Instances * @throws IOException if there is no source or parsing fails */ public Instances getDataSet() throws IOException { if (m_sourceReader == null) { throw new IOException("No source has been specified"); } if (getRetrieval() == INCREMENTAL) { throw new IOException("Cannot mix getting Instances in both incremental and batch modes"); } setRetrieval(BATCH); if (m_structure == null) { getStructure(); } // Read all instances // XXX This is inefficient because readInstance creates a new // StringTokenizer each time: This will be fixed once all arff reading // is moved out of Instances and into this Loader. while (m_structure.readInstance(m_sourceReader)); Instances readIn = new Instances(m_structure); /*if (m_File != null) { File temp = new File(m_File); if (temp.exists()) { setSource(temp); } }*/ return readIn; } /** * Read the data set incrementally---get the next instance in the data * set or returns null if there are no * more instances to get. If the structure hasn't yet been * determined by a call to getStructure then method should do so before * returning the next instance in the data set. * * @return the next instance in the data set as an Instance object or null * if there are no more instances to be read * @throws IOException if there is an error during parsing */ public Instance getNextInstance() throws IOException { if (m_structure == null) { getStructure(); } if (getRetrieval() == BATCH) { throw new IOException("Cannot mix getting Instances in both incremental and batch modes"); } setRetrieval(INCREMENTAL); if (!m_structure.readInstance(m_sourceReader)) { // try to reset the loader if the source is a file /*if (m_File != null) { File temp = new File(m_File); if (temp.exists()) { setSource(temp); } }*/ return null; } Instance current = m_structure.instance(0); m_structure.delete(0); if (current == null) { try { reset(); } catch (Exception ex) { ex.printStackTrace(); } } return current; } /** * Main method. * * @param args should contain the name of an input file. */ public static void main(String [] args) { runFileLoader(new ArffLoader(), args); }}
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