globins50.msf

emboss的linux版本的源代码

   MSF:  171  Type: P    Check:  4694   .. 

 Name: GLB2_MORMR      oo  Len:  171  Check:  6522  Weight: 2.7687
 Name: GLBZ_CHITH      oo  Len:  171  Check:  6733  Weight: 2.9329
 Name: HBA2_BOSMU      oo  Len:  171  Check:  5006  Weight: 0.6394
 Name: HBA2_GALCR      oo  Len:  171  Check:  6652  Weight: 0.5183
 Name: HBA4_SALIR      oo  Len:  171  Check:  5434  Weight: 1.9511
 Name: HBAD_CHLME      oo  Len:  171  Check:  6621  Weight: 1.2927
 Name: HBAD_PASMO      oo  Len:  171  Check:  8118  Weight: 1.2927
 Name: HBAZ_HORSE      oo  Len:  171  Check:  8382  Weight: 1.6223
 Name: HBA_AILME       oo  Len:  171  Check:  5402  Weight: 0.4145
 Name: HBA_ANSSE       oo  Len:  171  Check:  3688  Weight: 0.8315
 Name: HBA_COLLI       oo  Len:  171  Check:  4420  Weight: 0.8557
 Name: HBA_ERIEU       oo  Len:  171  Check:  5528  Weight: 0.8390
 Name: HBA_FRAPO       oo  Len:  171  Check:  4136  Weight: 0.5014
 Name: HBA_MACFA       oo  Len:  171  Check:  5986  Weight: 0.2233
 Name: HBA_MACSI       oo  Len:  171  Check:  6064  Weight: 0.2233
 Name: HBA_MESAU       oo  Len:  171  Check:  5499  Weight: 0.6722
 Name: HBA_PAGLA       oo  Len:  171  Check:  6189  Weight: 0.5388
 Name: HBA_PHACO       oo  Len:  171  Check:  5129  Weight: 0.5014
 Name: HBA_PONPY       oo  Len:  171  Check:  5894  Weight: 0.3907
 Name: HBA_PROLO       oo  Len:  171  Check:  5810  Weight: 0.4145
 Name: HBA_TRIOC       oo  Len:  171  Check:  6427  Weight: 0.6883
 Name: HBB1_VAREX      oo  Len:  171  Check:  7239  Weight: 1.1252
 Name: HBB2_TRICR      oo  Len:  171  Check:  7790  Weight: 1.9629
 Name: HBB2_XENTR      oo  Len:  171  Check:  9537  Weight: 1.4685
 Name: HBBL_RANCA      oo  Len:  171  Check:  7490  Weight: 1.4685
 Name: HBB_CALAR       oo  Len:  171  Check:  6568  Weight: 0.4226
 Name: HBB_COLLI       oo  Len:  171  Check:  5043  Weight: 0.7672
 Name: HBB_EQUHE       oo  Len:  171  Check:  6101  Weight: 0.6734
 Name: HBB_LARRI       oo  Len:  171  Check:  5673  Weight: 0.7672
 Name: HBB_MANSP       oo  Len:  171  Check:  7148  Weight: 0.4226
 Name: HBB_ORNAN       oo  Len:  171  Check:  6249  Weight: 0.6615
 Name: HBB_RABIT       oo  Len:  171  Check:  7043  Weight: 0.5259
 Name: HBB_SPECI       oo  Len:  171  Check:  3680  Weight: 0.5422
 Name: HBB_SPETO       oo  Len:  171  Check:  4246  Weight: 0.5422
 Name: HBB_SUNMU       oo  Len:  171  Check:  5601  Weight: 0.6734
 Name: HBB_TACAC       oo  Len:  171  Check:  7133  Weight: 0.6615
 Name: HBB_TRIIN       oo  Len:  171  Check:  4009  Weight: 0.8445
 Name: HBB_TUPGL       oo  Len:  171  Check:  7197  Weight: 0.7375
 Name: HBB_URSMA       oo  Len:  171  Check:  7200  Weight: 0.4695
 Name: HBE_PONPY       oo  Len:  171  Check:  5902  Weight: 1.0101
 Name: HBF1_URECA      oo  Len:  171  Check:  6462  Weight: 2.9329
 Name: LGB1_PEA        oo  Len:  171  Check:  4791  Weight: 2.0005
 Name: LGB1_VICFA      oo  Len:  171  Check:  7426  Weight: 2.0005
 Name: MYG_ESCGI       oo  Len:  171  Check:  9170  Weight: 0.7432
 Name: MYG_HORSE       oo  Len:  171  Check:  1290  Weight: 0.7432
 Name: MYG_LYCPI       oo  Len:  171  Check:  1107  Weight: 0.8773
 Name: MYG_MOUSE       oo  Len:  171  Check:  1320  Weight: 1.0018
 Name: MYG_MUSAN       oo  Len:  171  Check:  5461  Weight: 2.3158
 Name: MYG_PROGU       oo  Len:  171  Check:  1450  Weight: 0.7629
 Name: MYG_SAISC       oo  Len:  171  Check:  1728  Weight: 0.7629

//



GLB2_MORMR      ...PIVD..S GSVSPLSDAE KNKIRAAW.D IVYKNYEKNG VDILVKFFTG 
GLBZ_CHITH      MKFIILALCV AAASALSGDQ IGLVQST.YG KVKG....DS VGILYAVFKA 
HBA2_BOSMU      ...V...... .....LSAAD KGNVKAAW.G KVGGHAAEYG AEALERMFLS 
HBA2_GALCR      ...V...... .....LSPTD KSNVKAAW.E KVGAHAGDYG AEALERMFLS 
HBA4_SALIR      ...S...... .....LSAKD KANVKAIW.G KILPKSDEIG EQALSRMLVV 
HBAD_CHLME      ...M...... .....LTADD KKLLTQLW.E KVAGHQEEFG SEALQRMFLT 
HBAD_PASMO      ...M...... .....LTAED KKLIQQIW.G KLGGAEEEIG ADALWRMFHS 
HBAZ_HORSE      ...S...... .....LTKAE RTMVVSIW.G KISMQADAVG TEALQRLFSS 
HBA_AILME       ...V...... .....LSPAD KTNVKATW.D KIGGHAGEYG GEALERTFAS 
HBA_ANSSE       ...V...... .....LSAAD KGNVKTVF.G KIGGHAEEYG AETLQRMFQT 
HBA_COLLI       ...V...... .....LSAND KSNVKAVF.A KIGGQAGDLG GEALERLFIT 
HBA_ERIEU       ...V...... .....LSATD KANVKTFW.G KLGGHGGEYG GEALDRMFQA 
HBA_FRAPO       ...V...... .....LSAAD KNNVKGIF.G KISSHAEDYG AEALERMFIT 
HBA_MACFA       ...V...... .....LSPAD KTNVKAAW.G KVGGHAGEYG AEALERMFLS 
HBA_MACSI       ...V...... .....LSPAD KTNVKDAW.G KVGGHAGEYG AEALERMFLS 
HBA_MESAU       ...V...... .....LSAKD KTNISEAW.G KIGGHAGEYG AEALERMFFV 
HBA_PAGLA       ...V...... .....LSSAD KNNIKATW.D KIGSHAGEYG AEALERTFIS 
HBA_PHACO       ...V...... .....LSAAD KNNVKGIF.T KIAGHAEEYG AEALERMFIT 
HBA_PONPY       ...V...... .....LSPAD KTNVKTAW.G KVGAHAGDYG AEALERMFLS 
HBA_PROLO       ...V...... .....LSPAD KANIKATW.D KIGGHAGEYG GEALERTFAS 
HBA_TRIOC       ...V...... .....LSAND KTNVKTVF.T KITGHAEDYG AETLERMFIT 
HBB1_VAREX      ...V...... ....HWTAEE KQLICSLW.G KI..DVGLIG GETLAGLLVI 
HBB2_TRICR      ...V...... ....HLTAED RKEIAAIL.G KV..NVDSLG GQCLARLIVV 
HBB2_XENTR      ...V...... ....HWTAEE KATIASVW.G KV..DIEQDG HDALSRLLVV 
HBBL_RANCA      ...V...... ....HWTAEE KAVINSVW.Q KV..DVEQDG HEALTRLFIV 
HBB_CALAR       ...V...... ....HLTGEE KSAVTALW.G KV..NVDEVG GEALGRLLVV 
HBB_COLLI       ...V...... ....HWSAEE KQLITSIW.G KV..NVADCG AEALARLLIV 
HBB_EQUHE       ...V...... ....QLSGEE KAAVLALW.D KV..NEEEVG GEALGRLLVV 
HBB_LARRI       ...V...... ....HWSAEE KQLITGLW.G KV..NVADCG AEALARLLIV 
HBB_MANSP       ...V...... ....HLTPEE KTAVTTLW.G KV..NVDEVG GEALGRLLVV 
HBB_ORNAN       ...V...... ....HLSGGE KSAVTNLW.G KV..NINELG GEALGRLLVV 
HBB_RABIT       ...V...... ....HLSSEE KSAVTALW.G KV..NVEEVG GEALGRLLVV 
HBB_SPECI       ...V...... ....HLSDGE KNAISTAW.G KV..HAAEVG AEALGRLLVV 
HBB_SPETO       ...V...... ....HLTDGE KNAISTAW.G KV..NAAEIG AEALGRLLVV 
HBB_SUNMU       ...V...... ....HLSGEE KACVTGLW.G KV..NEDEVG AEALGRLLVV 
HBB_TACAC       ...V...... ....HLSGSE KTAVTNLW.G HV..NVNELG GEALGRLLVV 
HBB_TRIIN       ...V...... ....HLTPEE KALVIGLW.A KV..NVKEYG GEALGRLLVV 
HBB_TUPGL       ...V...... ....HLSGEE KAAVTGLW.G KV..DLEKVG GQSLGSLLIV 
HBB_URSMA       ...V...... ....HLTGEE KSLVTGLW.G KV..NVDEVG GEALGRLLVV 
HBE_PONPY       ...V...... ....HFTAEE KAAVTSLW.S KM..NVEEAG GEALGRLLVV 
HBF1_URECA      .......... ....GLTTAQ IKAIQDHWFL NIKGCLQAAA DSIFFKYLTA 
LGB1_PEA        GFTDKQEALV NSSSE.FKQN LPGYSILFYT IVLEKAP..A AKGL...... 
LGB1_VICFA      GFTEKQEALV NSSSQLFKQN PSNYSVLFYT IILQKAP..T AKAM...... 
MYG_ESCGI       ...V...... .....LSDAE WQLVLNIW.A KVEADVAGHG QDILIRLFKG 
MYG_HORSE       ...G...... .....LSDGE WQQVLNVW.G KVEADIAGHG QEVLIRLFTG 
MYG_LYCPI       ...G...... .....LSDGE WQIVLNIW.G KVETDLAGHG QEVLIRLFKN 
MYG_MOUSE       ...G...... .....LSDGE WQLVLNVW.G KVEADLAGHG QEVLIGLFKT 
MYG_MUSAN       .......... ........VD WEKVNSVW.S AVESDLTAIG QNILLRLFEQ 
MYG_PROGU       ...G...... .....LSDGE WQLVLNVW.G KVEGDLSGHG QEVLIRLFKG 
MYG_SAISC       ...G...... .....LSDGE WQLVLNIW.G KVEADIPSHG QEVLISLFKG 


GLB2_MORMR      TPAAQAFFPK FKGLTTADAL KKSSDVRWHA ERIINAVNDA VKSMDDTEKM 
GLBZ_CHITH      DPTIQAAFPQ FVGK.DLDAI KGGAEFSTHA GRIVGFLGGV IDDLP...NI 
HBA2_BOSMU      FPTTKTYFPH FD.LSH.... .GSAQVKGHG AKVAAALTKA VGHLDD...L 
HBA2_GALCR      FPTTKTYFPH FD.LSH.... .GSTQVKGHG KKVADALTNA VLHVDD...M 
HBA4_SALIR      YPQTKAYFSH WASVAP.... .GSAPVKKHG ITIMNQIDDC VGHMDD...L 
HBAD_CHLME      YPQTKTYFPH FD.LHP.... .GSEQVRGHG KKVAAALGNA VKSLDN...L 
HBAD_PASMO      YPSTKTYFPH FD.LSQ.... .GSDQIRGHG KKVVAALSNA IKNLDN...L 
HBAZ_HORSE      YPQTKTYFPH FD.LHE.... .GSPQLRAHG SKVAAAVGDA VKSIDN...V 
HBA_AILME       FPTTKTYFPH FD.LSP.... .GSAQVKAHG KKVADALTTA VGHLDD...L 
HBA_ANSSE       FPQTKTYFPH FD.LQP.... .GSAQIKAHG KKVAAALVEA ANHIDD...I 
HBA_COLLI       YPQTKTYFPH FD.LSH.... .GSAQIKGHG KKVAEALVEA ANHIDD...I 
HBA_ERIEU       HPTTKTYFPH FD.LNP.... .GSAQVKGHG KKVADALTTA VNNLDD...V 
HBA_FRAPO       YPSTKTYFPH FD.LSH.... .GSAQVKGHG KKVVAALIEA ANHIDD...I 
HBA_MACFA       FPTTKTYFPH FD.LSH.... .GSAQVKGHG KKVADALTLA VGHVDD...M 
HBA_MACSI       FPTTKTYFPH FD.LSH.... .GSAQVKGHG KKVADALTLA VGHVDD...M 
HBA_MESAU       YPTTKTYFPH FD.VSH.... .GSAQVKGHG KKVADALTNA VGHLDD...L 
HBA_PAGLA       FPTTKTYFPH FD.LSH.... .GSAQVKAHG KKVADALTLA VGHLED...L 
HBA_PHACO       YPSTKTYFPH FD.LSH.... .GSAQIKGHG KKVVAALIEA VNHIDD...I 
HBA_PONPY       FPTTKTYFPH FD.LSH.... .GSAQVKDHG KKVADALTNA VAHVDD...M 
HBA_PROLO       FPTTKTYFPH FD.LSP.... .GSAQVKAHG KKVADALTLA VGHLDD...L 
HBA_TRIOC       YPPTKTYFPH FD.LHH.... .GSAQIKAHG KKVVGALIEA VNHIDD...I 
HBB1_VAREX      YPWTQRQFSH FGNLSSPTAI AGNPRVKAHG KKVLTSFGDA IKNLDN...I 
HBB2_TRICR      NPWSRRYFHD FGDLSSCDAI CRNPKVLAHG AKVMRSIVEA TKHLDN...L