dan.usage

emboss的linux版本的源代码

<b>Here is a sample session with dan</b>
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% <b>dan </b>
Calculates DNA RNA/DNA melting temperature
Input nucleotide sequence(s): <b>tembl:paamir</b>
Enter window size [20]: <b></b>
Enter Shift Increment [1]: <b></b>
Enter DNA concentration (nM) [50.]: <b></b>
Enter salt concentration (mM) [50.]: <b></b>
Output report [paamir.dan]: <b></b>

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<a href="#input.1">Go to the input files for this example</a><br><a href="#output.1">Go to the output files for this example</a><p><p>
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<b>Example 2</b>
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An example of producing a plot of Tm: 
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<table width="90%"><tr><td bgcolor="#CCFFFF"><pre>

% <b>dan -plot -graph cps </b>
Calculates DNA RNA/DNA melting temperature
Input nucleotide sequence(s): <b>tembl:paamir</b>
Enter window size [20]: <b></b>
Enter Shift Increment [1]: <b></b>
Enter DNA concentration (nM) [50.]: <b></b>
Enter salt concentration (mM) [50.]: <b></b>
Enter minimum temperature [55.]: <b></b>

Created dan.ps

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<a href="#output.2">Go to the output files for this example</a><p><p>