dan.output

emboss的linux版本的源代码

<a name="output.1"></a>
<h3>Output files for usage example </h3>
<p><h3>File: paamir.dan</h3>
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<pre>
########################################
# Program: dan
# Rundate: Sat 15 Jul 2006 12:00:00
# Commandline: dan
#    -sequence tembl:paamir
# Report_format: seqtable
# Report_file: paamir.dan
########################################

#=======================================
#
# Sequence: PAAMIR     from: 1   to: 2167
# HitCount: 2148
#=======================================

  Start     End     Tm     GC DeltaG DeltaH DeltaS TmProd Sequence
      1      20   64.9   70.0      .      .      .      . ggtaccgctggccgagcatc
      2      21   63.7   65.0      .      .      .      . gtaccgctggccgagcatct
      3      22   63.7   65.0      .      .      .      . taccgctggccgagcatctg
      4      23   66.9   70.0      .      .      .      . accgctggccgagcatctgc
      5      24   66.7   70.0      .      .      .      . ccgctggccgagcatctgct
      6      25   65.5   70.0      .      .      .      . cgctggccgagcatctgctc
      7      26   65.5   70.0      .      .      .      . gctggccgagcatctgctcg
      8      27   63.7   65.0      .      .      .      . ctggccgagcatctgctcga
      9      28   62.9   60.0      .      .      .      . tggccgagcatctgctcgat
     10      29   62.6   65.0      .      .      .      . ggccgagcatctgctcgatc
     11      30   61.7   60.0      .      .      .      . gccgagcatctgctcgatca
     12      31   60.2   60.0      .      .      .      . ccgagcatctgctcgatcac
     13      32   60.2   60.0      .      .      .      . cgagcatctgctcgatcacc
     14      33   59.0   55.0      .      .      .      . gagcatctgctcgatcacca
     15      34   59.2   55.0      .      .      .      . agcatctgctcgatcaccac
     16      35   60.4   60.0      .      .      .      . gcatctgctcgatcaccacc
     17      36   58.9   55.0      .      .      .      . catctgctcgatcaccacca
     18      37   58.6   55.0      .      .      .      . atctgctcgatcaccaccag
     19      38   61.3   60.0      .      .      .      . tctgctcgatcaccaccagc
     20      39   62.4   65.0      .      .      .      . ctgctcgatcaccaccagcc
     21      40   63.9   65.0      .      .      .      . tgctcgatcaccaccagccg
     22      41   64.9   70.0      .      .      .      . gctcgatcaccaccagccgg
     23      42   64.3   70.0      .      .      .      . ctcgatcaccaccagccggg
     24      43   66.1   70.0      .      .      .      . tcgatcaccaccagccgggc
     25      44   67.5   75.0      .      .      .      . cgatcaccaccagccgggcg
     26      45   66.1   70.0      .      .      .      . gatcaccaccagccgggcga
     27      46   66.3   70.0      .      .      .      . atcaccaccagccgggcgac
     28      47   68.6   75.0      .      .      .      . tcaccaccagccgggcgacg
     29      48   69.8   80.0      .      .      .      . caccaccagccgggcgacgg
     30      49   70.7   80.0      .      .      .      . accaccagccgggcgacggg
     31      50   70.5   80.0      .      .      .      . ccaccagccgggcgacggga
     32      51   68.6   75.0      .      .      .      . caccagccgggcgacgggaa
     33      52   68.6   75.0      .      .      .      . accagccgggcgacgggaac
     34      53   68.4   75.0      .      .      .      . ccagccgggcgacgggaact


<font color=red>  [Part of this file has been deleted for brevity]</font>

   2101    2120   69.9   80.0      .      .      .      . ggccggagcgctgaccctgc
   2102    2121   68.7   75.0      .      .      .      . gccggagcgctgaccctgct
   2103    2122   65.5   70.0      .      .      .      . ccggagcgctgaccctgcta
   2104    2123   63.5   65.0      .      .      .      . cggagcgctgaccctgctat
   2105    2124   61.3   60.0      .      .      .      . ggagcgctgaccctgctatt
   2106    2125   60.1   60.0      .      .      .      . gagcgctgaccctgctattc
   2107    2126   61.7   60.0      .      .      .      . agcgctgaccctgctattcg
   2108    2127   63.4   65.0      .      .      .      . gcgctgaccctgctattcgc
   2109    2128   61.7   60.0      .      .      .      . cgctgaccctgctattcgct
   2110    2129   59.5   55.0      .      .      .      . gctgaccctgctattcgctt
   2111    2130   57.1   50.0      .      .      .      . ctgaccctgctattcgcttt
   2112    2131   56.4   45.0      .      .      .      . tgaccctgctattcgctttt
   2113    2132   54.7   45.0      .      .      .      . gaccctgctattcgctttta
   2114    2133   55.0   45.0      .      .      .      . accctgctattcgcttttac
   2115    2134   55.9   50.0      .      .      .      . ccctgctattcgcttttacc
   2116    2135   54.7   45.0      .      .      .      . cctgctattcgcttttacct
   2117    2136   52.0   40.0      .      .      .      . ctgctattcgcttttaccta
   2118    2137   51.2   35.0      .      .      .      . tgctattcgcttttacctat
   2119    2138   50.9   40.0      .      .      .      . gctattcgcttttacctatc
   2120    2139   49.0   35.0      .      .      .      . ctattcgcttttacctatct
   2121    2140   49.3   35.0      .      .      .      . tattcgcttttacctatctg
   2122    2141   51.1   35.0      .      .      .      . attcgcttttacctatctgt
   2123    2142   52.2   40.0      .      .      .      . ttcgcttttacctatctgtg
   2124    2143   54.0   45.0      .      .      .      . tcgcttttacctatctgtgg
   2125    2144   55.2   50.0      .      .      .      . cgcttttacctatctgtggg
   2126    2145   53.9   45.0      .      .      .      . gcttttacctatctgtgggt
   2127    2146   52.3   45.0      .      .      .      . cttttacctatctgtgggtg
   2128    2147   53.5   45.0      .      .      .      . ttttacctatctgtgggtgg
   2129    2148   56.0   50.0      .      .      .      . tttacctatctgtgggtggc
   2130    2149   57.8   55.0      .      .      .      . ttacctatctgtgggtggcc
   2131    2150   60.1   60.0      .      .      .      . tacctatctgtgggtggccg
   2132    2151   63.4   65.0      .      .      .      . acctatctgtgggtggccgc
   2133    2152   64.3   70.0      .      .      .      . cctatctgtgggtggccgcc
   2134    2153   63.4   65.0      .      .      .      . ctatctgtgggtggccgcca
   2135    2154   62.7   60.0      .      .      .      . tatctgtgggtggccgccaa
   2136    2155   64.5   65.0      .      .      .      . atctgtgggtggccgccaac
   2137    2156   66.5   70.0      .      .      .      . tctgtgggtggccgccaacc
   2138    2157   66.8   70.0      .      .      .      . ctgtgggtggccgccaacca
   2139    2158   66.8   70.0      .      .      .      . tgtgggtggccgccaaccag
   2140    2159   66.8   70.0      .      .      .      . gtgggtggccgccaaccagt
   2141    2160   65.9   65.0      .      .      .      . tgggtggccgccaaccagtt
   2142    2161   65.6   70.0      .      .      .      . gggtggccgccaaccagttc
   2143    2162   65.6   70.0      .      .      .      . ggtggccgccaaccagttcc
   2144    2163   64.4   65.0      .      .      .      . gtggccgccaaccagttcct
   2145    2164   64.1   65.0      .      .      .      . tggccgccaaccagttcctc
   2146    2165   65.4   70.0      .      .      .      . ggccgccaaccagttcctcg
   2147    2166   64.2   65.0      .      .      .      . gccgccaaccagttcctcga
   2148    2167   62.4   65.0      .      .      .      . ccgccaaccagttcctcgag

#---------------------------------------
#---------------------------------------
</pre>
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<a name="output.2"></a>
<h3>Output files for usage example 2</h3>
<p><h3>Graphics File: dan.ps</h3>
<p><img src="dan.2.dan.gif" alt="[dan results]">
<p><h3>File: paamir.dan</h3>
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<pre>
</pre>
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