fuzzpro.output

emboss的linux版本的源代码

<a name="output.1"></a>
<h3>Output files for usage example </h3>
<p><h3>File: 100k_rat.fuzzpro</h3>
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<pre>
########################################
# Program: fuzzpro
# Rundate: Sat 15 Jul 2006 12:00:00
# Commandline: fuzzpro
#    -sequence "tsw:*"
#    -pattern "[FY]-[LIV]-G-[DE]-E-A-Q-x-[RKQ](2)-G"
# Report_format: seqtable
# Report_file: 100k_rat.fuzzpro
########################################

#=======================================
#
# Sequence: ACT1_FUGRU     from: 1   to: 375
# HitCount: 1
#
# Pattern_name Mismatch Pattern
# pattern1            0 [FY]-[LIV]-G-[DE]-E-A-Q-x-[RKQ](2)-G
#
#=======================================

  Start     End Pattern_name Mismatch Sequence
     53      63 pattern1            . YVGDEAQSKRG

#---------------------------------------
#---------------------------------------
#=======================================
#
# Sequence: ACT2_FUGRU     from: 1   to: 375
# HitCount: 1
#
# Pattern_name Mismatch Pattern
# pattern1            0 [FY]-[LIV]-G-[DE]-E-A-Q-x-[RKQ](2)-G
#
#=======================================

  Start     End Pattern_name Mismatch Sequence
     53      63 pattern1            . YVGDEAQSKRG

#---------------------------------------
#---------------------------------------
#=======================================
#
# Sequence: ACT3_FUGRU     from: 1   to: 375
# HitCount: 1
#
# Pattern_name Mismatch Pattern
# pattern1            0 [FY]-[LIV]-G-[DE]-E-A-Q-x-[RKQ](2)-G
#
#=======================================



<font color=red>  [Part of this file has been deleted for brevity]</font>

#---------------------------------------
#=======================================
#
# Sequence: ACTC_FUGRU     from: 1   to: 377
# HitCount: 1
#
# Pattern_name Mismatch Pattern
# pattern1            0 [FY]-[LIV]-G-[DE]-E-A-Q-x-[RKQ](2)-G
#
#=======================================

  Start     End Pattern_name Mismatch Sequence
     55      65 pattern1            . YVGDEAQSKRG

#---------------------------------------
#---------------------------------------
#=======================================
#
# Sequence: ACTS_FUGRU     from: 1   to: 377
# HitCount: 1
#
# Pattern_name Mismatch Pattern
# pattern1            0 [FY]-[LIV]-G-[DE]-E-A-Q-x-[RKQ](2)-G
#
#=======================================

  Start     End Pattern_name Mismatch Sequence
     55      65 pattern1            . YVGDEAQSKRG

#---------------------------------------
#---------------------------------------
#=======================================
#
# Sequence: ACTT_FUGRU     from: 1   to: 377
# HitCount: 1
#
# Pattern_name Mismatch Pattern
# pattern1            0 [FY]-[LIV]-G-[DE]-E-A-Q-x-[RKQ](2)-G
#
#=======================================

  Start     End Pattern_name Mismatch Sequence
     55      65 pattern1            . YVGDEAQSKRG

#---------------------------------------
#---------------------------------------

#---------------------------------------
# Total_sequences: 6
# Total_hitcount: 6
#---------------------------------------
</pre>
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