fuzznuc.usage

emboss的linux版本的源代码

<b>Here is a sample session with fuzznuc</b>
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<table width="90%"><tr><td bgcolor="#CCFFFF"><pre>

% <b>fuzznuc </b>
Nucleic acid pattern search
Input nucleotide sequence(s): <b>tembl:hhtetra</b>
Search pattern: <b>AAGCTT</b>
Output report [hhtetra.fuzznuc]: <b></b>

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<a href="#input.1">Go to the input files for this example</a><br><a href="#output.1">Go to the output files for this example</a><p><p>
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<b>Example 2</b>
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<table width="90%"><tr><td bgcolor="#CCFFFF"><pre>

% <b>fuzznuc </b>
Nucleic acid pattern search
Input nucleotide sequence(s): <b>tembl:hhtetra</b>
Search pattern: <b>@nucseq.pat</b>
Output report [hhtetra.fuzznuc]: <b></b>

</pre></td></tr></table><p>
<p>
<a href="#input.2">Go to the input files for this example</a><br><a href="#output.2">Go to the output files for this example</a><p><p>
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<b>Example 3</b>
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<p>
<table width="90%"><tr><td bgcolor="#CCFFFF"><pre>

% <b>fuzznuc -pname test </b>
Nucleic acid pattern search
Input nucleotide sequence(s): <b>tembl:hhtetra</b>
Search pattern: <b>@nucsimple.pat</b>
Output report [hhtetra.fuzznuc]: <b></b>

</pre></td></tr></table><p>
<p>
<a href="#input.3">Go to the input files for this example</a><br><a href="#output.3">Go to the output files for this example</a><p><p>
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<b>Example 4</b>
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<p>
<table width="90%"><tr><td bgcolor="#CCFFFF"><pre>

% <b>fuzznuc </b>
Nucleic acid pattern search
Input nucleotide sequence(s): <b>tembl:hhtetra</b>
Search pattern: <b>@nuc.pat</b>
Output report [hhtetra.fuzznuc]: <b></b>

</pre></td></tr></table><p>
<p>
<a href="#input.4">Go to the input files for this example</a><br><a href="#output.4">Go to the output files for this example</a><p><p>