tcode.output

emboss的linux版本的源代码

<a name="output.1"></a>
<h3>Output files for usage example </h3>
<p><h3>File: hsfau1.tcode</h3>
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<pre>
########################################
# Program: tcode
# Rundate: Sat 15 Jul 2006 12:00:00
# Commandline: tcode
#    -sequence tembl:hsfau1
# Report_format: table
# Report_file: hsfau1.tcode
########################################

#=======================================
#
# Sequence: HSFAU1     from: 1   to: 2016
# HitCount: 606
#
# Fickett TESTCODE statistic
#
#=======================================

  Start     End   Score Estimation
      1     200   0.673 Non-coding
      4     203   0.681 Non-coding
      7     206   0.649 Non-coding
     10     209   0.649 Non-coding
     13     212   0.649 Non-coding
     16     215   0.657 Non-coding
     19     218   0.687 Non-coding
     22     221   0.767 No opinion
     25     224   0.800 No opinion
     28     227   0.782 No opinion
     31     230   0.779 No opinion
     34     233   0.839 No opinion
     37     236   0.951 Coding    
     40     239   0.916 No opinion
     43     242   0.900 No opinion
     46     245   0.839 No opinion
     49     248   0.835 No opinion
     52     251   0.926 No opinion
     55     254   0.887 No opinion
     58     257   0.927 No opinion
     61     260   0.873 No opinion
     64     263   0.873 No opinion
     67     266   0.927 No opinion
     70     269   1.033 Coding    
     73     272   1.044 Coding    
     76     275   1.012 Coding    
     79     278   1.105 Coding    
     82     281   1.022 Coding    
     85     284   1.098 Coding    
     88     287   0.976 Coding    
     91     290   0.962 Coding    


<font color=red>  [Part of this file has been deleted for brevity]</font>

   1690    1889   0.907 No opinion
   1693    1892   1.005 Coding    
   1696    1895   0.985 Coding    
   1699    1898   0.907 No opinion
   1702    1901   0.985 Coding    
   1705    1904   0.985 Coding    
   1708    1907   0.988 Coding    
   1711    1910   0.981 Coding    
   1714    1913   1.001 Coding    
   1717    1916   1.001 Coding    
   1720    1919   1.004 Coding    
   1723    1922   0.975 Coding    
   1726    1925   0.975 Coding    
   1729    1928   0.927 No opinion
   1732    1931   0.939 No opinion
   1735    1934   0.930 No opinion
   1738    1937   0.860 No opinion
   1741    1940   0.876 No opinion
   1744    1943   0.876 No opinion
   1747    1946   0.836 No opinion
   1750    1949   0.883 No opinion
   1753    1952   0.934 No opinion
   1756    1955   0.965 Coding    
   1759    1958   1.012 Coding    
   1762    1961   1.025 Coding    
   1765    1964   0.940 No opinion
   1768    1967   0.978 Coding    
   1771    1970   0.978 Coding    
   1774    1973   1.012 Coding    
   1777    1976   1.023 Coding    
   1780    1979   1.023 Coding    
   1783    1982   1.023 Coding    
   1786    1985   1.012 Coding    
   1789    1988   0.972 Coding    
   1792    1991   0.943 No opinion
   1795    1994   1.031 Coding    
   1798    1997   1.031 Coding    
   1801    2000   0.926 No opinion
   1804    2003   0.845 No opinion
   1807    2006   0.804 No opinion
   1810    2009   0.765 No opinion
   1813    2012   0.765 No opinion
   1816    2015   0.765 No opinion

#---------------------------------------
#---------------------------------------

#---------------------------------------
# Total_sequences: 1
# Total_hitcount: 606
#---------------------------------------
</pre>
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<a name="output.2"></a>
<h3>Output files for usage example 2</h3>
<p><h3>Graphics File: tcode.ps</h3>
<p><img src="tcode.2.tcode.gif" alt="[tcode results]">
<p><h3>File: hsfau1.tcode</h3>
<table width="90%"><tr><td bgcolor="#CCFFCC">
<pre>
</pre>
</td></tr></table><p>