marscan.input

emboss的linux版本的源代码

<a name="input.1"></a>
<h3>Input files for usage example </h3>

'tembl:u01317' is a sequence entry in the example nucleic acid database 'tembl'
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<p><h3>Database entry: tembl:u01317</h3>
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ID   HSHBB      standard; DNA; HUM; 73308 BP.
XX
AC   U01317; J00093; J00094; J00096; J00158; J00159; J00160; J00161; J00162;
AC   J00163; J00164; J00165; J00166; J00167; J00168; J00169; J00170; J00171;
AC   J00172; J00173; J00174; J00175; J00177; J00178; J00179; K01239; K01890;
AC   K02544; M18047; M19067; M24868; M24886;
XX
SV   U01317.1
XX
DT   19-MAR-1994 (Rel. 39, Created)
DT   31-MAR-2001 (Rel. 67, Last updated, Version 28)
XX
DE   Human beta globin region on chromosome 11.
XX
KW   allelic variation; alternate cap site; Alu repeat; beta-1 pseudogene;
KW   beta-globin; delta-globin; epsilon-globin; gamma-globin; gene duplication;
KW   globin; HPFH; KpnI repetitive sequence; polymorphism; promoter mutation;
KW   pseudogene; repetitive sequence; RNA polymerase III; thalassemia.
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Primates; Catarrhini; Hominidae; Homo.
XX
RN   [1]
RP   62409-62631, 63482-63610
RX   MEDLINE; 74275150.
RA   Marotta C.A., Forget B.G., Weissman S.M., Verma I.M., McCaffrey R.P.,
RA   Baltimore D.;
RT   "Nucleotide sequences of human globin messenger RNA";
RL   Proc. Natl. Acad. Sci. U.S.A. 71:2300-2304(1974).
XX
RN   [2]
RP   63602-63646
RX   MEDLINE; 76053173.
RA   Forget B.G., Marotta C.A., Weissman S.M., Cohen-Solal M.M.;
RT   "Nucleotide sequences of the 3'-terminal untranslated region of messenger
RT   RNA for human beta globin chain";
RL   Proc. Natl. Acad. Sci. U.S.A. 72:3614-3618(1975).
XX
RN   [3]
RP   63593-63626
RX   MEDLINE; 77022845.
RA   Proudfoot N.J., Brownlee G.G.;
RT   "Nucleotide sequences of globin messenger RNA";
RL   Br. Med. Bull. 32:251-256(1976).
XX
RN   [4]
RP   63673-63743
RX   MEDLINE; 77114153.
RA   Proudfoot N.J., Longley J.I.;


<font color=red>  [Part of this file has been deleted for brevity]</font>

     aaaggggaga agaatcaaat agacgcaata aaaaatgaca cggggtatca ccactgatcc     70380
     cacagaaata caaactaccg tcagagaata ctataaacac ctctacgcaa ataaactaga     70440
     aaatctagaa gaaatggata aattcctcga cacatacact ctgccaagac taaaccagga     70500
     agaagttgta tctctgaata gaccaataac aggctctgaa attgaggcaa taattaatag     70560
     cttatcaacc aaaaaaagtc cgggaccagt aggattcata gccgaattct accagaggta     70620
     caaggaggag ctggtaccat tccttctgaa actattccaa tcaatagaaa aagagggaat     70680
     cctccctaac tcattttatg aggccagcat catcctgata ccaaagcctg acagagacac     70740
     aacaaaaaaa gagaatgtta caccaatatc cttgatgaac atcgatgcaa aaatcctcaa     70800
     taaaatactg gcaaactgaa tccagcagca catcaaaaag cttatcctcc atgatcaagt     70860
     gggcttcatc cctgccatgc aaggctggtt caacatacga aatcaataaa cataatccag     70920
     catataaaca gaaccaaaga cacaaaccat atgattatct caatagatgc agaaaaggcc     70980
     tttgacaaaa ttcaacaatg cttcatgcta aaaactctca ataaattagg tattgatggg     71040
     acatatctca aaataataag agctatctat gacaaaccca cagccaatat catactgagt     71100
     ggacaaaaac tggaagcatt ccctttgaaa actggcacaa ggcagggatg ccctctctca     71160
     ccactcctat tcaacatagt gttggaagtt ctggccaggg caatcaggca ggagaaggaa     71220
     ataaagggca ttcaattagg aaaagaggaa ggtgaaattg tccctgtttg cagatgacat     71280
     gattgtatat ctagaaaacc ccattgtctc agcccaaaat ctccttaagc tgataagcaa     71340
     cttcagcaaa gtctcaggat ataaaatcag tgtgcaaaaa tcacaagtat tcctatgcac     71400
     caataacaga caaacagaga gccaaatcat gagtgaactc ccattcacaa ttgcttcaaa     71460
     gagaataaaa tacctaggaa tccaacttac aagggatgtg aaggacctct tcaaggagaa     71520
     ctacaaacca ctgctcaatg aaataaaaga ggatacaaac aaatggaaga acattccatg     71580
     cttatgggta ggaagaatca tatcgtgaaa atggtcatac tgcccaaggt aatttataga     71640
     ttcaatgcca tccccatcaa gctaccaatg actttcttca cagaactgga aaaaactact     71700
     ttaaagttca tatggaatca aaaaagagcc cacatcacca aggcaatcct aagccaaaag     71760
     aacaaagctg gaggcatcac gctacctgac ttcaaactat actacaatgc tacggtaacc     71820
     aaaacagcat ggtactggta ccaaaacaga gatctagacc aatggaacag aacagagccc     71880
     tcagaaataa tgccgcatat ctacaactat ccgatctttg acaaacctga gagaaacaag     71940
     caatggggaa aggattccct atttaataaa tggtgctggg aaaactggct agccatatgt     72000
     agaaagctga aactggatcc ttccttacac cttatacaaa aattaattca agatggatta     72060
     aagacttaaa cattagacct aaaaccataa aaaccctaga aaaaaaccta ggcaatacca     72120
     ttcaggacat aggcatgggc aaggacttca tgtctaaaac accaaaacga atggcaacaa     72180
     aagacaaaat ggacaaacgg gatctaatta aactaaagag cttctgcaca gctaaagaaa     72240
     ctaccatcag agtgaacagg caacctacaa aatgggagaa aatttttgca atctactcat     72300
     ctgacaaagg gctaatatcc agaatctaca atgaactcaa acaaatttac aagaaaaaac     72360
     aaacaacccc atcaaaaagt gggcaaagga tatgaacaga cacttctcaa aagaagacat     72420
     ttatgtaatc aaaaaacaca tgaaaaaatg ctcatcatca ctagccatca gagaaatgca     72480
     aatcaaaacc acaatgagat accatctcac accagttaga atggcgatca ttaaaaagtc     72540
     aggaaacaac aggtgctgga gaggatgtgg agaaacagga acaactttta cactgttggt     72600
     gggactgtaa actagttcaa ccattgcgga agtcagtgtg gcaattcctc aggaatctag     72660
     aactagaaat accatttgac ccagccatcc cattactggg tagataccca aaggattata     72720
     aatcatgctg ctataaagac acatgcacac gtatgtttat tgcagcacta ttcacaatag     72780
     caaagacttg gaaccaaccc aaatgtccaa caacgataga ttggattaag aaaatgtggc     72840
     acatatacac catggaatac tatgcagcca taaaaaatga tgagttcatg tcctttgtag     72900
     ggacatggat gaagctggaa actatcattc tcagcaaact atcacaagga caataaacca     72960
     aacaccgcat gttctcactc ataggtggga attgaacaat gagaacacat ggacacatga     73020
     agaggaacat cacactctgg ggactgttat ggggtggggg gcaggggcag ggatagcact     73080
     aggagatata cctaatgcta aatgacgagt taatgggtgc agcacaccaa catggcacat     73140
     gtatacatat ataacaaacc tgccgttgtg cacatgtacc ctaaaacttg aagtataata     73200
     ataaaaaaaa gttatcctat taaaactgat ctcacacatc cgtagagcca ttatcaagtc     73260
     tttctctttg aaacagacag aaatttagtg ttttctcagt cagttaac                  73308
//
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