embossdata.itable

emboss的linux版本的源代码

<table border cellspacing=0 cellpadding=3 bgcolor="#ccccff">
<tr bgcolor="#FFFFCC">
<th align="left" colspan=2>Standard (Mandatory) qualifiers</th>
<th align="left">Allowed values</th>
<th align="left">Default</th>
</tr>

<tr>
<td>[-filename]<br>(Parameter 1)</td>
<td>This specifies the name of the file that should be fetched into the current directory or searched for in all of the directories that EMBOSS programs search when looking for a data file. The name of the file is not altered when it is fetched.</td>
<td>Any string is accepted</td>
<td><i>An empty string is accepted</i></td>
</tr>

<tr bgcolor="#FFFFCC">
<th align="left" colspan=2>Additional (Optional) qualifiers</th>
<th align="left">Allowed values</th>
<th align="left">Default</th>
</tr>

<tr>
<td>-showall</td>
<td>Show all potential EMBOSS data files</td>
<td>Toggle value Yes/No</td>
<td>No</td>
</tr>

<tr>
<td>-fetch</td>
<td>Fetch a data file</td>
<td>Boolean value Yes/No</td>
<td>No</td>
</tr>

<tr>
<td>-outfile</td>
<td>This specifies the name of the file that the results of a search for a file in the various data directories is written to. By default these results are written to the screen (stdout).</td>
<td>Output file</td>
<td>stdout</td>
</tr>

<tr bgcolor="#FFFFCC">
<th align="left" colspan=2>Advanced (Unprompted) qualifiers</th>
<th align="left">Allowed values</th>
<th align="left">Default</th>
</tr>

<tr>
<td>-reject</td>
<td>This specifies the names of the sub-directories of the EMBOSS data directory that should be ignored when displaying data directories.</td>
<td>Choose from selection list of values</td>
<td>3, 5, 6</td>
</tr>

</table>