patmatdb.output

emboss的linux版本的源代码

<a name="output.1"></a>
<h3>Output files for usage example </h3>
<p><h3>File: 100k_rat.patmatdb </h3>
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<pre>
########################################
# Program: patmatdb
# Rundate: Sat 15 Jul 2006 12:00:00
# Commandline: patmatdb
#    -sequence "tsw:*"
#    -motif "st[ty]s"
# Report_format: dbmotif
# Report_file: 100k_rat.patmatdb
########################################

#=======================================
#
# Sequence: HD_FUGRU     from: 1   to: 3148
# HitCount: 1
#
# Motif: ST[TY]S
#
#=======================================

Length = 4
Start = position 1038 of sequence
End = position 1041 of sequence


STPASSTTSSAVDP
     |  |
  1038  1041


#---------------------------------------
#---------------------------------------
#=======================================
#
# Sequence: GCN4_YEAST     from: 1   to: 281
# HitCount: 1
#
# Motif: ST[TY]S
#
#=======================================

Length = 4
Start = position 158 of sequence
End = position 161 of sequence


SNLEVSTTSFLPTP
     |  |
   158  161


#---------------------------------------
#---------------------------------------
#=======================================
#
# Sequence: PAXI_HUMAN     from: 1   to: 557
# HitCount: 1
#
# Motif: ST[TY]S
#
#=======================================

Length = 4
Start = position 13 of sequence
End = position 16 of sequence


LADLESTTSHISKR
     |  |
    13  16


#---------------------------------------
#---------------------------------------

#---------------------------------------
# Total_sequences: 3
# Total_hitcount: 3
#---------------------------------------
</pre>
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