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📄 poisson.h

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        // Compute basisvalues    const double basisvalue0 = 0.866025403784439*psitilde_a_0*scalings_y_0*psitilde_bs_0_0*scalings_z_0*psitilde_cs_00_0;    const double basisvalue1 = 2.73861278752583*psitilde_a_1*scalings_y_1*psitilde_bs_1_0*scalings_z_1*psitilde_cs_10_0;    const double basisvalue2 = 1.58113883008419*psitilde_a_0*scalings_y_0*psitilde_bs_0_1*scalings_z_1*psitilde_cs_01_0;    const double basisvalue3 = 1.11803398874989*psitilde_a_0*scalings_y_0*psitilde_bs_0_0*scalings_z_0*psitilde_cs_00_1;        // Table(s) of coefficients    const static double coefficients0[4][4] = \    {{0.288675134594813, -0.182574185835055, -0.105409255338946, -0.074535599249993},    {0.288675134594813, 0.182574185835055, -0.105409255338946, -0.074535599249993},    {0.288675134594813, 0, 0.210818510677892, -0.074535599249993},    {0.288675134594813, 0, 0, 0.223606797749979}};        // Interesting (new) part    // Tables of derivatives of the polynomial base (transpose)    const static double dmats0[4][4] = \    {{0, 0, 0, 0},    {6.32455532033676, 0, 0, 0},    {0, 0, 0, 0},    {0, 0, 0, 0}};        const static double dmats1[4][4] = \    {{0, 0, 0, 0},    {3.16227766016838, 0, 0, 0},    {5.47722557505166, 0, 0, 0},    {0, 0, 0, 0}};        const static double dmats2[4][4] = \    {{0, 0, 0, 0},    {3.16227766016838, 0, 0, 0},    {1.82574185835055, 0, 0, 0},    {5.16397779494322, 0, 0, 0}};        // Compute reference derivatives    // Declare pointer to array of derivatives on FIAT element    double *derivatives = new double [num_derivatives];        // Declare coefficients    double coeff0_0 = 0;    double coeff0_1 = 0;    double coeff0_2 = 0;    double coeff0_3 = 0;        // Declare new coefficients    double new_coeff0_0 = 0;    double new_coeff0_1 = 0;    double new_coeff0_2 = 0;    double new_coeff0_3 = 0;        // Loop possible derivatives    for (unsigned int deriv_num = 0; deriv_num < num_derivatives; deriv_num++)    {      // Get values from coefficients array      new_coeff0_0 = coefficients0[dof][0];      new_coeff0_1 = coefficients0[dof][1];      new_coeff0_2 = coefficients0[dof][2];      new_coeff0_3 = coefficients0[dof][3];          // Loop derivative order      for (unsigned int j = 0; j < n; j++)      {        // Update old coefficients        coeff0_0 = new_coeff0_0;        coeff0_1 = new_coeff0_1;        coeff0_2 = new_coeff0_2;        coeff0_3 = new_coeff0_3;            if(combinations[deriv_num][j] == 0)        {          new_coeff0_0 = coeff0_0*dmats0[0][0] + coeff0_1*dmats0[1][0] + coeff0_2*dmats0[2][0] + coeff0_3*dmats0[3][0];          new_coeff0_1 = coeff0_0*dmats0[0][1] + coeff0_1*dmats0[1][1] + coeff0_2*dmats0[2][1] + coeff0_3*dmats0[3][1];          new_coeff0_2 = coeff0_0*dmats0[0][2] + coeff0_1*dmats0[1][2] + coeff0_2*dmats0[2][2] + coeff0_3*dmats0[3][2];          new_coeff0_3 = coeff0_0*dmats0[0][3] + coeff0_1*dmats0[1][3] + coeff0_2*dmats0[2][3] + coeff0_3*dmats0[3][3];        }        if(combinations[deriv_num][j] == 1)        {          new_coeff0_0 = coeff0_0*dmats1[0][0] + coeff0_1*dmats1[1][0] + coeff0_2*dmats1[2][0] + coeff0_3*dmats1[3][0];          new_coeff0_1 = coeff0_0*dmats1[0][1] + coeff0_1*dmats1[1][1] + coeff0_2*dmats1[2][1] + coeff0_3*dmats1[3][1];          new_coeff0_2 = coeff0_0*dmats1[0][2] + coeff0_1*dmats1[1][2] + coeff0_2*dmats1[2][2] + coeff0_3*dmats1[3][2];          new_coeff0_3 = coeff0_0*dmats1[0][3] + coeff0_1*dmats1[1][3] + coeff0_2*dmats1[2][3] + coeff0_3*dmats1[3][3];        }        if(combinations[deriv_num][j] == 2)        {          new_coeff0_0 = coeff0_0*dmats2[0][0] + coeff0_1*dmats2[1][0] + coeff0_2*dmats2[2][0] + coeff0_3*dmats2[3][0];          new_coeff0_1 = coeff0_0*dmats2[0][1] + coeff0_1*dmats2[1][1] + coeff0_2*dmats2[2][1] + coeff0_3*dmats2[3][1];          new_coeff0_2 = coeff0_0*dmats2[0][2] + coeff0_1*dmats2[1][2] + coeff0_2*dmats2[2][2] + coeff0_3*dmats2[3][2];          new_coeff0_3 = coeff0_0*dmats2[0][3] + coeff0_1*dmats2[1][3] + coeff0_2*dmats2[2][3] + coeff0_3*dmats2[3][3];        }          }      // Compute derivatives on reference element as dot product of coefficients and basisvalues      derivatives[deriv_num] = new_coeff0_0*basisvalue0 + new_coeff0_1*basisvalue1 + new_coeff0_2*basisvalue2 + new_coeff0_3*basisvalue3;    }        // Transform derivatives back to physical element    for (unsigned int row = 0; row < num_derivatives; row++)    {      for (unsigned int col = 0; col < num_derivatives; col++)      {        values[row] += transform[row][col]*derivatives[col];      }    }    // Delete pointer to array of derivatives on FIAT element    delete [] derivatives;        // Delete pointer to array of combinations of derivatives and transform    for (unsigned int row = 0; row < num_derivatives; row++)    {      delete [] combinations[row];      delete [] transform[row];    }        delete [] combinations;    delete [] transform;  }  /// Evaluate order n derivatives of all basis functions at given point in cell  virtual void evaluate_basis_derivatives_all(unsigned int n,                                              double* values,                                              const double* coordinates,                                              const ufc::cell& c) const  {    throw std::runtime_error("The vectorised version of evaluate_basis_derivatives() is not yet implemented.");  }  /// Evaluate linear functional for dof i on the function f  virtual double evaluate_dof(unsigned int i,                              const ufc::function& f,                              const ufc::cell& c) const  {    // The reference points, direction and weights:    const static double X[4][1][3] = {{{0, 0, 0}}, {{1, 0, 0}}, {{0, 1, 0}}, {{0, 0, 1}}};    const static double W[4][1] = {{1}, {1}, {1}, {1}};    const static double D[4][1][1] = {{{1}}, {{1}}, {{1}}, {{1}}};        const double * const * x = c.coordinates;    double result = 0.0;    // Iterate over the points:    // Evaluate basis functions for affine mapping    const double w0 = 1.0 - X[i][0][0] - X[i][0][1] - X[i][0][2];    const double w1 = X[i][0][0];    const double w2 = X[i][0][1];    const double w3 = X[i][0][2];        // Compute affine mapping y = F(X)    double y[3];    y[0] = w0*x[0][0] + w1*x[1][0] + w2*x[2][0] + w3*x[3][0];    y[1] = w0*x[0][1] + w1*x[1][1] + w2*x[2][1] + w3*x[3][1];    y[2] = w0*x[0][2] + w1*x[1][2] + w2*x[2][2] + w3*x[3][2];        // Evaluate function at physical points    double values[1];    f.evaluate(values, y, c);        // Map function values using appropriate mapping    // Affine map: Do nothing        // Note that we do not map the weights (yet).        // Take directional components    for(int k = 0; k < 1; k++)      result += values[k]*D[i][0][k];    // Multiply by weights     result *= W[i][0];        return result;  }  /// Evaluate linear functionals for all dofs on the function f  virtual void evaluate_dofs(double* values,                             const ufc::function& f,                             const ufc::cell& c) const  {    throw std::runtime_error("Not implemented (introduced in UFC v1.1).");  }  /// Interpolate vertex values from dof values  virtual void interpolate_vertex_values(double* vertex_values,                                         const double* dof_values,                                         const ufc::cell& c) const  {    // Evaluate at vertices and use affine mapping    vertex_values[0] = dof_values[0];    vertex_values[1] = dof_values[1];    vertex_values[2] = dof_values[2];    vertex_values[3] = dof_values[3];  }  /// Return the number of sub elements (for a mixed element)  virtual unsigned int num_sub_elements() const  {    return 1;  }  /// Create a new finite element for sub element i (for a mixed element)  virtual ufc::finite_element* create_sub_element(unsigned int i) const  {    return new UFC_PoissonBilinearForm_finite_element_0();  }};/// This class defines the interface for a finite element.class UFC_PoissonBilinearForm_finite_element_1: public ufc::finite_element{public:  /// Constructor  UFC_PoissonBilinearForm_finite_element_1() : ufc::finite_element()  {    // Do nothing  }  /// Destructor  virtual ~UFC_PoissonBilinearForm_finite_element_1()  {    // Do nothing  }  /// Return a string identifying the finite element  virtual const char* signature() const  {    return "Lagrange finite element of degree 1 on a tetrahedron";  }  /// Return the cell shape  virtual ufc::shape cell_shape() const  {    return ufc::tetrahedron;  }  /// Return the dimension of the finite element function space  virtual unsigned int space_dimension() const  {    return 4;  }  /// Return the rank of the value space  virtual unsigned int value_rank() const  {    return 0;  }  /// Return the dimension of the value space for axis i  virtual unsigned int value_dimension(unsigned int i) const  {    return 1;  }  /// Evaluate basis function i at given point in cell  virtual void evaluate_basis(unsigned int i,                              double* values,                              const double* coordinates,                              const ufc::cell& c) const  {    // Extract vertex coordinates    const double * const * element_coordinates = c.coordinates;        // Compute Jacobian of affine map from reference cell    const double J_00 = element_coordinates[1][0] - element_coordinates[0][0];    const double J_01 = element_coordinates[2][0] - element_coordinates[0][0];    const double J_02 = element_coordinates[3][0] - element_coordinates[0][0];    const double J_10 = element_coordinates[1][1] - element_coordinates[0][1];    const double J_11 = element_coordinates[2][1] - element_coordinates[0][1];    const double J_12 = element_coordinates[3][1] - element_coordinates[0][1];    const double J_20 = element_coordinates[1][2] - element_coordinates[0][2];    const double J_21 = element_coordinates[2][2] - element_coordinates[0][2];    const double J_22 = element_coordinates[3][2] - element_coordinates[0][2];          // Compute sub determinants    const double d00 = J_11*J_22 - J_12*J_21;    const double d01 = J_12*J_20 - J_10*J_22;    const double d02 = J_10*J_21 - J_11*J_20;        const double d10 = J_02*J_21 - J_01*J_22;    const double d11 = J_00*J_22 - J_02*J_20;    const double d12 = J_01*J_20 - J_00*J_21;        const double d20 = J_01*J_12 - J_02*J_11;    const double d21 = J_02*J_10 - J_00*J_12;    const double d22 = J_00*J_11 - J_01*J_10;          // Compute determinant of Jacobian    double detJ = J_00*d00 + J_10*d10 + J_20*d20;        // Compute inverse of Jacobian        // Compute constants    const double C0 = d00*(element_coordinates[0][0] - element_coordinates[2][0] - element_coordinates[3][0]) \                    + d10*(element_coordinates[0][1] - element_coordinates[2][1] - element_coordinates[3][1]) \                    + d20*(element_coordinates[0][2] - element_coordinates[2][2] - element_coordinates[3][2]);        const double C1 = d01*(element_coordinates[0][0] - element_coordinates[1][0] - element_coordinates[3][0]) \                    + d11*(element_coordinates[0][1] - element_coordinates[1][1] - element_coordinates[3][1]) \                    + d21*(element_coordinates[0][2] - element_coordinates[1][2] - element_coordinates[3][2]);        const double C2 = d02*(element_coordinates[0][0] - element_coordinates[1][0] - element_coordinates[2][0]) \                    + d12*(element_coordinates[0][1] - element_coordinates[1][1] - element_coordinates[2][1]) \                    + d22*(element_coordinates[0][2] - element_coordinates[1][2] - element_coordinates[2][2]);        // Get coordinates and map to the UFC reference element    double x = (C0 + d00*coordinates[0] + d10*coordinates[1] + d20*coordinates[2]) / detJ;    double y = (C1 + d01*coordinates[0] + d11*coordinates[1] + d21*coordinates[2]) / detJ;    double z = (C2 + d02*coordinates[0] + d12*coordinates[1] + d22*coordinates[2]) / detJ;        // Map coordinates to the reference cube    if (std::abs(y + z - 1.0) < 1e-14)      x = 1.0;    else      x = -2.0 * x/(y + z - 1.0) - 1.0;    if (std::abs(z - 1.0) < 1e-14)      y = -1.0;    else      y = 2.0 * y/(1.0 - z) - 1.0;    z = 2.0 * z - 1.0;        // Reset values    *values = 0;        // Map degree of freedom to element degree of freedom    const unsigned int dof = i;        // Generate scalings    const double scalings_y_0 = 1;    const double scalings_y_1 = scalings_y_0*(0.5 - 0.5*y);    const double scalings_z_0 = 1;    const double scalings_z_1 = scalings_z_0*(0.5 - 0.5*z);        // Compute psitilde_a    const double psitilde_a_0 = 1;    const double psitilde_a_1 = x;        // Compute psitilde_bs    const double psitilde_bs_0_0 = 1;    const double psitilde_bs_0_1 = 1.5*y + 0.5;    const double psitilde_bs_1_0 = 1;        // Compute psitilde_cs    const double psitilde_cs_00_0 = 1;

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