📄 symbbwblk.c
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/*
x = symbbwblk(L, b)
L is structure with m x m sparse Cholesky factor L.L, b is m x k sparse rhs.
Computes sparsity structure of x = L.L' \ b in linear time.
Property used: L(i,j) != 0, L(k,j) != 0 ==> L(k,i) != 0 for j < i < k.
Thus, for each supernodal column L(:,j), we only need the first nonzero
supernode i > j; the remaining ones have already been taken care of
while backward-solving i.
% This file is part of SeDuMi 1.1 by Imre Polik and Oleksandr Romanko
% Copyright (C) 2005 McMaster University, Hamilton, CANADA (since 1.1)
%
% Copyright (C) 2001 Jos F. Sturm (up to 1.05R5)
% Dept. Econometrics & O.R., Tilburg University, the Netherlands.
% Supported by the Netherlands Organization for Scientific Research (NWO).
%
% Affiliation SeDuMi 1.03 and 1.04Beta (2000):
% Dept. Quantitative Economics, Maastricht University, the Netherlands.
%
% Affiliations up to SeDuMi 1.02 (AUG1998):
% CRL, McMaster University, Canada.
% Supported by the Netherlands Organization for Scientific Research (NWO).
%
% This program is free software; you can redistribute it and/or modify
% it under the terms of the GNU General Public License as published by
% the Free Software Foundation; either version 2 of the License, or
% (at your option) any later version.
%
% This program is distributed in the hope that it will be useful,
% but WITHOUT ANY WARRANTY; without even the implied warranty of
% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
% GNU General Public License for more details.
%
% You should have received a copy of the GNU General Public License
% along with this program; if not, write to the Free Software
% Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
% 02110-1301, USA
*/
#include <string.h>
#include "mex.h"
#include "blksdp.h"
#define X_OUT plhs[0]
#define NPAROUT 1
#define L_IN prhs[0]
#define B_IN prhs[1]
#define NPARIN 2
/* ************************************************************
PROCEDURE getSnodeBelow - Get supernodal partition and first
below-diag supernode of L.
INPUT
ljc, lir - uncompressed nz-structure of L
xsuper - supernodal partition (length nsuper+1).
nsuper - number of supernodes
OUTPUT
snodebelow - length nsuper, the first nonzero supernode below the
supernodal diag block. Is nsuper if none.
snode - length m = xsuper[nsuper+1]. Maps subnode to its supernode.
************************************************************ */
void getSnodeBelow(int *snodebelow, int *snode,
const int *ljc, const int *lir, const int *xsuper,
const int nsuper)
{
int j, jsup, ix, nj, jcol;
/* ------------------------------------------------------------
SNODE: map each column to the supernode containing it
------------------------------------------------------------ */
j = xsuper[0];
for(jsup = 0; jsup < nsuper; jsup++){
while(j < xsuper[jsup + 1])
snode[j++] = jsup;
}
/* ------------------------------------------------------------
FIRST SUPERNODAL SUBSCRIPT BELOW DIAGONAL:
Let snodebelow[jsup] = snode[lir[ljc[jcol] + nj]],
where xsuper[jsup:jsup+1] = jcol : jcol+nj.
------------------------------------------------------------ */
for(jsup = 0, jcol = 0; jsup < nsuper; jsup++){
nj = xsuper[jsup + 1] - jcol; /* nj = length snode jsup */
ix = ljc[jcol] + nj; /* points just below diag block */
if(ix < ljc[jcol + 1]) /* Anything below diag-block ? */
snodebelow[jsup] = snode[lir[ix]];
else
snodebelow[jsup] = nsuper; /* nsuper = nothing below diag */
jcol += nj; /* jcol = xsuper[jsup+1] */
}
}
/* ************************************************************
PROCEDURE bwnzsuper - Compute sparsity structure of L'\b, by
determining nonzero-supernodes, and "1 beyond" subnodes within
them (each supernode is a dense diag block in L).
INPUT
bir, bnnz - bir(bnnz) lists the row-indices of vector b.
snode, xsuper - supernodal partition.
xsuper(nsuper+1): xsuper(j):xsuper(j+1)-1 is jth supernode
snode(m): j=snode(i) means xsuper(j) <= i < xsuper(j+1).
snodebelow - First nonzero supernode below jth diagonal block, if any.
Otherwise, snodebelow[j] = nsuper.
UPDATED
processed - char(nsuper+1) array. On input all-0, on output
processed[jsup] = 1 iff jsup is in nz structure of L'\b.
OUTPUT
snodeto - Length nsuper array. snodeto[jsup]-1 is last relevant
subnode of each supernode jsup where processed[jsup]=1.
************************************************************ */
void bwnzsuper(int *snodeto, char *processed,
const int *bir, const int bnnz,
const int *snode, const int *xsuper,
const int *snodebelow)
{
int inz,jsup,lastsub;
/* ------------------------------------------------------------
Browse all supernodes jsup = snode[ bir[ inz ] ], letting snodeto[jsup]
point beyond its last subnode in bir.
NOTE: if b = e_i, then only jsup=snode[i] has snodeto, the other
supernodes will be full.
------------------------------------------------------------ */
if(bnnz <= 0)
return;
lastsub = bir[bnnz - 1];
inz = 0;
while(inz < bnnz){
jsup = snode[bir[inz]]; /* jsup = current snode */
if(xsuper[jsup + 1] <= lastsub) /* Let inz point to next snode */
while(bir[++inz] < xsuper[jsup + 1]);
else
inz = bnnz;
snodeto[jsup] = bir[inz - 1] + 1; /* last subscript + 1 */
processed[jsup] = 1;
}
/* ------------------------------------------------------------
Symbolic supernodal backward solve:
1) If !processed[snodebelow[jsup]], then no contribution from
L(:,jsup), since remaining sparsity structure is part of snodebelow[jsup]
2) Otherwise, the whole supernode gets nonzero, since L(jsup,jsup) is
supernodal diag block.
------------------------------------------------------------ */
for(--jsup; jsup >= 0; jsup--)
if(processed[snodebelow[jsup]]){
processed[jsup] = 1;
snodeto[jsup] = xsuper[jsup + 1]; /* Include full supernode */
}
}
/* ************************************************************
PROCEDURE symbbwmat - Computes nz-structure of x = L'\b.
INPUT
bjc, bir - nz-structure of m x n RHS-matrix b.
snode, xsuper - supernodal partition.
xsuper(nsuper+1): xsuper(j):xsuper(j+1)-1 is jth supernode
snode(m): j=snode(i) means xsuper(j) <= i < xsuper(j+1).
xlindx,lindx - compressed subscript array.
xlindx(nsuper+1): lindx(xlindx(j):xlindx(j+1)-1) are the subscripts
for supernode j.
nsuper - number of supernodes
m,n - size(b), m rows, n columns.
OUTPUT
xjc - n+1-array: Start of each column in *pxir.
*pxir - length *pmaxnnz array of row-indices.
UPDATED
*pmaxnnz - The allocated number of entries in *pxir. Will be changed
by this function to the exact number needed (but s.t. maxnnz >= 1).
WORK
snodeto - int(nsuper)
processed - char(nsuper+1)
************************************************************ */
void symbbwmat(int *xjc, int **pxir,int *pmaxnnz,
const int *bjc, const int *bir,
const int *snode, const int *xsuper,
const int *snodebelow,
const int nsuper, const int m, const int n,
int *snodeto, char *processed)
{
int i,j,k,inz, maxnnz;
int *xir;
/* ------------------------------------------------------------
INIT: processed = 0, xir = *pxir, maxnnz = *pmaxnnz.
processes[nsuper]=0 is used for "empty"-flag "snodebelow[j]=nsuper".
------------------------------------------------------------ */
memset(processed, 0, (nsuper + 1) * sizeof(char));
xir = *pxir;
maxnnz = *pmaxnnz;
/* ------------------------------------------------------------
For each column j, compute nz-structure of L'\b(:,j) into xir.
First make sure that xir has enough (at least m) available entries.
------------------------------------------------------------ */
inz = 0;
for(j = 0; j < n; j++){
xjc[j] = inz;
if(inz + m > maxnnz){
maxnnz += inz + m; /* required + old amount */
xir = (int *) mxRealloc(xir, maxnnz * sizeof(int));
}
/* ------------------------------------------------------------
Find all nz-supernodes in L'\b(:,j).
------------------------------------------------------------ */
bwnzsuper(snodeto, processed, bir + bjc[j], bjc[j+1]-bjc[j],
snode, xsuper, snodebelow);
/* ------------------------------------------------------------
For each nz-supernode, write the row-indices "< snodeto" into xir.
------------------------------------------------------------ */
for(k = 0; k < nsuper; k++)
if(processed[k]){
processed[k] = 0;
for(i = xsuper[k]; i < snodeto[k]; i++)
xir[inz++] = i;
}
}
/* ------------------------------------------------------------
FINALLY: close last column in xir, Realloc xir to the actual
maxnnz:= xjc[n], and return.
------------------------------------------------------------ */
xjc[n] = inz;
if(inz < maxnnz){
maxnnz = MAX(inz,1); /* avoid realloc to NULL */
xir = (int *) mxRealloc(xir, maxnnz * sizeof(int));
}
*pxir = xir;
*pmaxnnz = maxnnz;
}
/* ============================================================
MAIN: MEXFUNCTION
============================================================ */
/* ************************************************************
PROCEDURE mexFunction - Entry for Matlab
************************************************************ */
void mexFunction(const int nlhs, mxArray *plhs[],
const int nrhs, const mxArray *prhs[])
{
const mxArray *L_FIELD;
int maxnnz, i,j, nsuper,m,n;
const int *ljc,*lir,*bjc,*bir;
int *xjc,*xir, *snode,*snodebelow, *iwork,*xsuper;
char *cwork;
double *xpr;
const double *xsuperPr;
/* ------------------------------------------------------------
Check for proper number of arguments
------------------------------------------------------------ */
mxAssert(nrhs >= NPARIN, "symbfwblk requires more input arguments");
mxAssert(nlhs <= NPAROUT, "symbfwblk produces 1 output argument");
/* ------------------------------------------------------------
Get rhs-input B
------------------------------------------------------------ */
mxAssert(mxIsSparse(B_IN), "B must be sparse");
m = mxGetM(B_IN);
n = mxGetN(B_IN);
bjc = mxGetJc(B_IN);
bir = mxGetIr(B_IN);
/* ------------------------------------------------------------
Disassemble block Cholesky structure L
------------------------------------------------------------ */
mxAssert(mxIsStruct(L_IN), "Parameter `L' should be a structure.");
L_FIELD = mxGetField(L_IN,0,"L");
mxAssert( L_FIELD != NULL, "Missing field L.L."); /* L.L */
mxAssert( m == mxGetM(L_FIELD) && m == mxGetN(L_FIELD), "Size L.L mismatch.");
mxAssert(mxIsSparse(L_FIELD), "L.L should be sparse.");
ljc = mxGetJc(L_FIELD);
lir = mxGetIr(L_FIELD);
L_FIELD = mxGetField(L_IN,0,"xsuper");
mxAssert( L_FIELD != NULL, "Missing field L.xsuper."); /* L.xsuper */
nsuper = mxGetM(L_FIELD) * mxGetN(L_FIELD) - 1;
mxAssert( nsuper <= m, "Size L.xsuper mismatch.");
xsuperPr = mxGetPr(L_FIELD);
/* ------------------------------------------------------------
Allocate int-part of sparse output matrix X(m x n)
Heuristically set nnz to nnz(B) + 4*m.
------------------------------------------------------------ */
maxnnz = bjc[n] + 4 * m;
xjc = (int *) mxCalloc(n + 1, sizeof(int));
xir = (int *) mxCalloc(maxnnz, sizeof(int));
/* ------------------------------------------------------------
Allocate working arrays:
int snode(m), xsuper(nsuper+1), snodebelow(nsuper),
iwork(nsuper).
char cwork(nsuper+1).
------------------------------------------------------------ */
snode = (int *) mxCalloc(m,sizeof(int));
xsuper = (int *) mxCalloc(nsuper+1,sizeof(int));
snodebelow = (int *) mxCalloc(nsuper,sizeof(int));
iwork = (int *) mxCalloc(nsuper, sizeof(int));
cwork = (char *) mxCalloc(nsuper+1, sizeof(char));
/* ------------------------------------------------------------
Convert XSUPER to integer and C-Style
------------------------------------------------------------ */
for(i = 0; i <= nsuper; i++){
j = xsuperPr[i];
xsuper[i] = --j;
}
/* ------------------------------------------------------------
Create "snode" from xsuper, and get "first-below-diag"
supernodal subscript snodebelow (snodebelow[j]==nsuper means none).
This is enough to determine the nz-pattern of the backward-solve.
------------------------------------------------------------ */
getSnodeBelow(snodebelow,snode, ljc,lir,xsuper,nsuper);
/* ------------------------------------------------------------
Compute nz structure after backward solve
------------------------------------------------------------ */
symbbwmat(xjc, &xir, &maxnnz, bjc, bir, snode, xsuper,
snodebelow, nsuper, m, n, iwork, cwork);
/* ------------------------------------------------------------
Create output matrix x
------------------------------------------------------------ */
X_OUT = mxCreateSparse(m,n, 1,mxREAL);
mxFree(mxGetJc(X_OUT)); /* jc */
mxFree(mxGetIr(X_OUT)); /* ir */
mxFree(mxGetPr(X_OUT)); /* pr */
xpr = (double *) mxCalloc(maxnnz,sizeof(double));
mxSetJc(X_OUT, xjc);
mxSetIr(X_OUT, xir);
mxSetPr(X_OUT, xpr);
mxSetNzmax(X_OUT, maxnnz);
for(i = 0; i < maxnnz; i++)
xpr[i] = 1.0;
/* ------------------------------------------------------------
Release working arrays.
------------------------------------------------------------ */
mxFree(cwork);
mxFree(iwork);
mxFree(snodebelow);
mxFree(xsuper);
mxFree(snode);
}
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