makefile_bak

c++编写的并行拉马克遗传算法的程序。实现分析对接程序

	$(CC) $(CFLAGS) -c print_avsfld.cc 

writeMolAsPDBQ.o : writePDBQ.cc writePDBQ.h constants.h autocomm.h
	$(CC) $(CFLAGS) -c -DWRITEMOLASPDBQFUNC writePDBQ.cc -o writeMolAsPDBQ.o

writePDBQ.o : writePDBQ.cc writePDBQ.h constants.h autocomm.h
	$(CC) $(CFLAGS) -c writePDBQ.cc -o writePDBQ.o

writePDBQState.o : writePDBQ.cc writePDBQ.h constants.h autocomm.h
	$(CC) $(CFLAGS) -c -DWRITEPDBQSTATE writePDBQ.cc -o writePDBQState.o

print_rem.o : print_rem.cc print_rem.h
	$(CC) $(CFLAGS) -c print_rem.cc

printdate.o : printdate.cc printdate.h
	$(CC) $(CFLAGS) -c printdate.cc

printEnergies.o : printEnergies.cc printEnergies.h
	$(CC) $(CFLAGS) -c printEnergies.cc

printhms.o : printhms.cc printhms.h
	$(CC) $(CFLAGS) -c printhms.cc

qmultiply.o : qmultiply.cc qmultiply.h
	$(CC) $(CFLAGS) -c qmultiply.cc

qtransform.o : qtransform.cc qtransform.h constants.h
	$(CC) $(CFLAGS) -c qtransform.cc

quicksort.o : quicksort.cc quicksort.h
	$(CC) $(CFLAGS) -c quicksort.cc

ranlib.o : ranlib.cc ranlib.h
	$(CC) $(CFLAGS) -c ranlib.cc

readfield.o : readfield.cc readfield.h constants.h openfile.h stop.h
	$(CC) $(CFLAGS) -c readfield.cc

readmap.o : readmap.cc readmap.h constants.h openfile.h warn_bad_file.h strindex.h print_2x.h check_header_line.h warn_bad_file.h check_header_float.h check_header_int.h timesys.h autocomm.h
	$(CC) $(CFLAGS) -c readmap.cc

rep.o: rep.cc rep.h ranlib.h
	$(CC) $(CFLAGS) -c rep.cc

scauchy.o  : scauchy.cc ranlib.h
	$(CC) $(CFLAGS) -c scauchy.cc

set_cmd_io_std.o : set_cmd_io_std.cc set_cmd_io_std.h
	$(CC) $(CFLAGS) -c set_cmd_io_std.cc

setflags.o : setflags.cc setflags.h
	$(CC) $(CFLAGS) -c setflags.cc

simanneal.o : simanneal.cc simanneal.h constants.h autocomm.h
	$(CC) $(OLIMIT) -c simanneal.cc

sort_enrg.o : sort_enrg.cc sort_enrg.h constants.h
	$(CC) $(CFLAGS) -c sort_enrg.cc

stop.o : stop.cc stop.h constants.h
	$(CC) $(CFLAGS) -c stop.cc

strindex.o : strindex.cc strindex.h
	$(CC) $(CFLAGS) -c strindex.cc

success.o : success.cc success.h constants.h autocomm.h
	$(CC) $(CFLAGS) -c success.cc

summarizegrids.o : summarizegrids.cc summarizegrids.h constants.h autocomm.h
	$(CC) $(CFLAGS) -c summarizegrids.cc

support.o : support.cc support.h eval.h
	$(CC) $(CFLAGS) -c support.cc

swap.o : swap.cc swap.h
	$(CC) $(CFLAGS) -c swap.cc

timesys.o : timesys.cc timesys.h
	$(CC) $(CFLAGS) -c timesys.cc

timesyshms.o : timesyshms.cc timesyshms.h
	$(CC) $(CFLAGS) -c timesyshms.cc

torNorVec.o : torNorVec.cc torNorVec.h constants.h
	$(CC) $(CFLAGS) -c torNorVec.cc

torsion.o : torsion.cc torsion.h constants.h
	$(CC) $(CFLAGS) -c torsion.cc

trilinterp.o : trilinterp.cc trilinterp.h constants.h
	$(CC) $(CFLAGS) -c trilinterp.cc

trilinterp.MINPT.o : trilinterp.cc trilinterp.h constants.h
	$(CC) $(CFLAGS) -DMINPT -c trilinterp.cc -o trilinterp.MINPT.o

usage.o : usage.cc usage.h constants.h
	$(CC) $(CFLAGS) -c usage.cc

warn_bad_file.o : warn_bad_file.cc warn_bad_file.h constants.h
	$(CC) $(CFLAGS) -c warn_bad_file.cc

weedbonds.o : weedbonds.cc weedbonds.h constants.h
	$(CC) $(CFLAGS) -c weedbonds.cc

eintcal.sqrt.o : eintcal.cc eintcal.h constants.h
	$(CC) $(CFLAGS) -c -DBOUNDED eintcal.cc -o eintcal.sqrt.o

eintcalPrint.sqrt.o : eintcal.cc eintcal.h constants.h
	$(CC) $(CFLAGS) -c -DBOUNDED -DEINTCALPRINT eintcal.cc -o eintcalPrint.sqrt.o

intnbtable.sqrt.o : intnbtable.cc intnbtable.h constants.h
	$(CC) $(OLIMIT) -c intnbtable.cc -o intnbtable.sqrt.o

nbe.sqrt.o : nbe.cc nbe.h constants.h
	$(CC) $(CFLAGS) -c nbe.cc -o nbe.sqrt.o

#
# lcheck dependencies...
#

analysis.ln : analysis.cc
	$(LINT) $(LINTFLAGS) $?

banner.ln : banner.cc
	$(LINT) $(LINTFLAGS) $?

bestpdb.ln : bestpdb.cc
	$(LINT) $(LINTFLAGS) $?

changeState.ln : changeState.cc
	$(LINT) $(LINTFLAGS) $?

check_header_float.ln : check_header_float.cc
	$(LINT) $(LINTFLAGS) $?

check_header_int.ln : check_header_int.cc
	$(LINT) $(LINTFLAGS) $?

check_header_line.ln : check_header_line.cc
	$(LINT) $(LINTFLAGS) $?

cluster_analysis.ln : cluster_analysis.cc
	$(LINT) $(LINTFLAGS) $?

clmode.ln : clmode.cc
	$(LINT) $(LINTFLAGS) $?

cmdmode.ln : cmdmode.cc
	$(LINT) $(LINTFLAGS) $?

cnv_state_to_coords.ln : cnv_state_to_coords.cc
	$(LINT) $(LINTFLAGS) $?

stateLibrary.ln : stateLibrary.cc
	$(CC) $(CFLAGS) -c $?

readfield.ln : readfield.cc
	$(LINT) $(LINTFLAGS) $?

readmap.ln : readmap.cc
	$(LINT) $(LINTFLAGS) $?

readPDBQ.ln : readPDBQ.cc
	$(LINT) $(LINTFLAGS) $?

dpftypes.ln : dpftypes.cc
	$(LINT) $(LINTFLAGS) $?

evaluate_energy.ln : evaluate_energy.cc
	$(LINT) $(LINTFLAGS) $?

getrms.ln : getrms.cc
	$(LINT) $(LINTFLAGS) $?

get_atom_type.ln : get_atom_type.cc
	$(LINT) $(LINTFLAGS) $?

getInitialState.ln : getInitialState.cc
	$(LINT) $(LINTFLAGS) $?

getpdbcrds.ln : getpdbcrds.cc
	$(LINT) $(LINTFLAGS) $?

initautodock.ln : initautodock.cc
	$(LINT) $(LINTFLAGS) $?

input_state.ln : input_state.cc
	$(LINT) $(LINTFLAGS) $?

investigate.ln : investigate.cc
	$(LINT) $(LINTFLAGS) $?

main.ln : main.cc
	$(LINT) $(LINTFLAGS) $?

mkNewState.ln : mkNewState.cc
	$(LINT) $(LINTFLAGS) $?

mkTorTree.ln : mkTorTree.cc
	$(LINT) $(LINTFLAGS) $?

mkRandomState.ln : mkRandomState.cc
	$(LINT) $(LINTFLAGS) $?

nonbonds.ln : nonbonds.cc
	$(LINT) $(LINTFLAGS) $?

openfile.ln : openfile.cc
	$(LINT) $(LINTFLAGS) $?

output_state.ln : output_state.cc
	$(LINT) $(LINTFLAGS) $?

parse_com_line.ln : parse_com_line.cc
	$(LINT) $(LINTFLAGS) $?

parse_dpf_line.ln : parse_dpf_line.cc
	$(LINT) $(LINTFLAGS) $?

parse_pdbq_line.ln : parse_pdbq_line.cc
	$(LINT) $(LINTFLAGS) $?

parse_trj_line.ln : parse_trj_line.cc
	$(LINT) $(LINTFLAGS) $?

print_2x.ln : print_2x.cc
	$(LINT) $(LINTFLAGS) $?

print_atomic_energies.ln : print_atomic_energies.cc
	$(LINT) $(LINTFLAGS) $?

print_avsfld.ln : print_avsfld.cc
	$(LINT) $(LINTFLAGS) $?

writeMolAsPDBQ.ln : writePDBQ.cc
	$(LINT) $(LINTFLAGS) -DWRITEMOLASPDBQFUNC $?

writePDBQ.ln : writePDBQ.cc
	$(LINT) $(LINTFLAGS) $?

writePDBQState.ln : writePDBQ.cc
	$(LINT) $(LINTFLAGS) -DWRITEPDBQSTATE $?

print_rem.ln : print_rem.cc
	$(LINT) $(LINTFLAGS) $?

printdate.ln : printdate.cc
	$(LINT) $(LINTFLAGS) $?

printEnergies.ln : printEnergies.cc
	$(LINT) $(LINTFLAGS) $?

printhms.ln : printhms.cc
	$(LINT) $(LINTFLAGS) $?

prClusterHist.ln : prClusterHist.cc
	$(LINT) $(LINTFLAGS) $?

prInitialState.ln : prInitialState.cc
	$(LINT) $(LINTFLAGS) $?

prTorConList.ln : prTorConList.cc
	$(LINT) $(LINTFLAGS) $?

qmultiply.ln : qmultiply.cc
	$(LINT) $(LINTFLAGS) $?

qtransform.ln : qtransform.cc
	$(LINT) $(LINTFLAGS) $?

quicksort.ln : quicksort.cc
	$(LINT) $(LINTFLAGS) $?

set_cmd_io_std.ln : set_cmd_io_std.cc
	$(LINT) $(LINTFLAGS) $?

setflags.ln : setflags.cc
	$(LINT) $(LINTFLAGS) $?

simanneal.ln : simanneal.cc
	$(LINT) $(LINTFLAGS) $?

sort_enrg.ln : sort_enrg.cc
	$(LINT) $(LINTFLAGS) $?

stop.ln : stop.cc
	$(LINT) $(LINTFLAGS) $?

strindex.ln : strindex.cc
	$(LINT) $(LINTFLAGS) $?

success.ln : success.cc
	$(LINT) $(LINTFLAGS) $?

summarizegrids.ln : summarizegrids.cc
	$(LINT) $(LINTFLAGS) $?

swap.ln : swap.cc
	$(LINT) $(LINTFLAGS) $?

timesys.ln : timesys.cc
	$(LINT) $(LINTFLAGS) $?

timesyshms.ln : timesyshms.cc
	$(LINT) $(LINTFLAGS) $?

torNorVec.ln : torNorVec.cc
	$(LINT) $(LINTFLAGS) $?

torsion.ln : torsion.cc
	$(LINT) $(LINTFLAGS) $?

trilinterp.ln : trilinterp.cc
	$(LINT) $(LINTFLAGS) $?

usage.ln : usage.cc
	$(LINT) $(LINTFLAGS) $?

weedbonds.ln : weedbonds.cc
	$(LINT) $(LINTFLAGS) $?

warn_bad_file.ln : warn_bad_file.cc
	$(LINT) $(LINTFLAGS) $?

#
# NOSQRT conditionals activated:
#

eintcal.ln : eintcal.cc
	$(LINT) $(LINTFLAGS) -DNOSQRT $?

eintcalPrint.ln : eintcal.cc
	$(LINT) $(LINTFLAGS) -DNOSQRT -DEINTCALPRINT $?

intnbtable.ln : intnbtable.cc
	$(LINT) $(LINTFLAGS) -DNOSQRT $?

nbe.ln : nbe.cc
	$(LINT) $(LINTFLAGS) -DNOSQRT $?

#
# NOSQRT conditionals NOT activated:
#

eintcal.sqrt.ln : eintcal.cc
	$(LINT) $(LINTFLAGS) $?

eintcalPrint.sqrt.ln : eintcal.cc
	$(LINT) $(LINTFLAGS) -DEINTCALPRINT $?

intnbtable.sqrt.ln : intnbtable.cc
	$(LINT) $(LINTFLAGS) $?

nbe.sqrt.ln : nbe.cc
	$(LINT) $(LINTFLAGS) $?

#
# Clean up...
#

clean :
	/bin/rm -f *.o *.s *.ln a.out mon.out autodock3 autodock3sqrt autodock3minpt dualmap libad.a

cleanlcheck :
	/bin/rm -f *.ln

#
# Compaq/DEC Alpha
#
openalpha :
	/bin/cp -p obj.alpha/*.o .
openlintalpha :
	/bin/cp -p obj.alpha/*.ln .
#
closealpha :
	/bin/cp -p *.o obj.alpha
	/bin/rm -f *.o
closelintalpha :
	/bin/cp -p *.ln obj.alpha
	/bin/rm -f *.ln

#
# Hewlett-Packard Precision Architecture
#
openhppa :
	/bin/cp -p obj.hppa/*.o .
openlinthppa :
	/bin/cp -p obj.hppa/*.ln .
#
closehppa :
	/bin/cp -p *.o obj.hppa
	/bin/rm -f *.o
closelinthppa :
	/bin/cp -p *.ln obj.hppa
	/bin/rm -f *.ln

#
# SGI/sgi4D/Silicon Graphics
#
opensgi4D :
	/bin/cp -p obj.sgi4D/*.o .
openlintsgi4D :
	/bin/cp -p obj.sgi4D/*.ln .
#
closesgi4D :
	/bin/cp -p *.o obj.sgi4D
	/bin/rm -f *.o
closelintsgi4D :
	/bin/cp -p *.ln obj.sgi4D
	/bin/rm -f *.ln

#
# Convex
#
openc2 :
	/bin/cp -p obj.c2/*.o .
openlintc2 :
	/bin/cp -p obj.c2/*.ln .
#
closec2 :
	/bin/cp -p *.o obj.c2
	/bin/rm -f *.o
closelintc2 :
	/bin/cp -p *.ln obj.c2
	/bin/rm -f *.ln

#
# Sun
#
opensun4 :
	/bin/cp -p obj.sun4/*.o .
openlintsun4 :
	/bin/cp -p obj.sun4/*.ln .
#
closesun4 :
	/bin/cp -p *.o obj.sun4
	/bin/rm -f *.o
closelintsun4 :
	/bin/cp -p *.ln obj.sun4
	/bin/rm -f *.ln

#
# EOF
#