📄 im_measure.m
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%IM_MEASURE Computation by DIP_Image of feature measurements%% F = IM_MEASURE(A,GRAY,FEATURES)%% INPUT% A Dataset with binary object images dataset (possibly multi-band)% GRAY Gray-valued images (matched with A, optional)% FEATURES Features to be computed%% OUTPUT% F Dataset with computed features%% In each image of the measurement set GRAY the features given in FEATURES % are measured. In A a segmented version of GRAY has to be supplied.% When no GRAY is supplied, the binary images in A are used. Only% the largest object in each image is considered.%% The following features may be computed:% 'dimension','mean','stddev','gravity','size','center','max','min',% 'maxval','minval','feret'','inertia','ccbendingenergy'.% Note that some features like 'mean' (mean image intensity) and 'stddev'% (standard deviation of image intensity) are not useful for binary images.% Run MEASUREHELP to get some information on these measures.%% Use FEATURES = 'all' for computing all features.% Use MEASUREHELP for some description of the features.%% SEE ALSO% DATASETS, DATAFILES, MEASURE, MEASUREHELP% Copyright: R.P.W. Duin, r.p.w.duin@prtools.org% Faculty EWI, Delft University of Technology% P.O. Box 5031, 2600 GA Delft, The Netherlandsfunction b = im_measure(a,gray,features) prtrace(mfilename); if nargin < 3 features = []; end %if nargin < 2 | isempty(gray), gray = a; end if isempty(a) b = mapping(mfilename,'fixed',{gray,features}); b = setname(b,'DIP measurements'); elseif isdataset(a) if (nargin < 3 | isempty(features)) & ~isdataset(gray) features = gray; gray = a; end if ~isdataset(gray) error('Binary and gray images should be both datasets') end fsize = getfeatsize(a); if any(getfeatsize(gray) ~= fsize) error('Image structures of binary and gray images should be identical') end if length(fsize) == 2, fsize = [fsize 1]; end if size(a,1) ~= size(gray,1) error('Same number of binary and gray images expected') end out = []; binim = data2im(a); grim = data2im(gray); nim = size(a,1)*fsize(3); s = sprintf('Measuring %i images',nim); prwaitbar(nim,s); for i=1:size(a,1) for j=1:fsize(3) prwaitbar(nim,(i-1)*fsize(3)+j); f = feval(mfilename,binim(:,:,j,i),grim(:,:,j,i),features); if isempty(out) out = repmat(f(:)',[size(a,1),1,fsize(3)]); %out = reshape(f(:)',[size(a,1),1,fsize(3)]); else out(i,:,j) = f; end end end prwaitbar(0); b = setdat(a,out); b = setfeatsize(b,[length(f),fsize(3)]); b = setfeatlab(b,getfeaturelabels(features)); elseif isdatafile(a) if nargin < 3 | isempty(features) & ~isdatafile(gray) features = gray; gray = a; end if ~isdatafile(gray) error('Binary and gray images should be both datafiles') end b = dyadic(a,mfilename,gray,{features}); %b = setfeatlab(b,getfeaturelabels(features)); elseif isa(a,'double') | isa(a,'dip_image') % here we have a single image if isempty(features), features = 'dimension'; end gray = 1.0*dip_image(gray); %labim = label(dip_image(im_select_blob(a),'bin')); labim = label(dip_image(a,'bin')); c = measure(labim,gray,'size',[],2); labid = c.id; sz = c.size; [bb,mm] = max(sz); labid = labid(mm); if strcmp(features,'all') features = {'dimension','mean','stddev','gravity',... 'size','center','max','min', 'maxval','minval',... 'feret','inertia', 'ccbendingenergy'}; end b = measure(labim,gray,features,labid,2); b = double(b); else error('Wrong input') end returnfunction names = getfeaturelabels(features)names = {};for i=1:length(features) switch features{i} case 'dimension' names{end+1} = 'imagewidth'; names{end+1} = 'imageheight'; case 'mean' names{end+1} = 'mean int'; case {'mean', 'sum'} names{end+1} = 'mass'; case 'stddev' names{end+1} = 'standard dev.'; case 'gravity' names{end+1} = 'gravity x'; names{end+1} = 'gravity y'; case 'size' names{end+1} = 'size'; case 'center' names{end+1} = 'center x'; names{end+1} = 'center y'; case 'max' names{end+1} = 'max x coord'; names{end+1} = 'max y coord'; case 'min' names{end+1} = 'min x coord'; names{end+1} = 'min y coord'; case 'maxval' names{end+1} = 'max int'; case 'minval' names{end+1} = 'min int'; case 'perimeter' names{end+1} = 'perimeter'; case 'feret' names{end+1} = 'max diameter'; names{end+1} = 'min diameter'; names{end+1} = 'max perp. diameter'; case 'inertia' names{end+1} = 'inertia moment 1'; names{end+1} = 'inertia moment 2'; case 'ccbendingenergy' names{end+1} = 'bending energy perimeter'; otherwise error('I do not know feature %s.',features{i}); endendreturn
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