extractseqname.txt

来自「比对算法的具体应用DNA序列分析 ——基因序列 ——基因表达调控信息 寻找基因牵」· 文本 代码 · 共 49 行

***  GENOME EXPLORER HELP FILE  ***

To provide help on using the GUI, and information about how the programs run

Contents

1)  Outline of Function
2)  Parameters loaded from the .inf file (settings menu)
3)  The User Interface
4)  Underlying Method


---  EXTRACT SEQ NAME  ---

---  1)  Outline of Function ---

Reads in a fasta file and pulls all the description lines into a new file

Can input many files at one time and process then sequentially.  One
outfile per infile.  Outfiles are named as infiles, but with the outfExt
extension added.


---  2)  Parameters loaded from the .inf file (settings menu) ---


outfExt           extension to add to outfile (.names);

seqExtractInDir   directory in which to open infile file chooser

seqExtractOutDir  default directory in which to write output files 



---  3)  The User Interface  ---

select fasta files to search
     add / remove files from the list box using the add / remove buttons.
     All files listed will be run sequentially

select output directory
     select a directory to which outfiles will be written

---  4)  Underlying Method   ---


see explanation in 'outline of function' section