nb_kernel301_x86_64_sse2.intel_syntax.s
来自「最著名最快的分子模拟软件」· S 代码 · 共 2,119 行 · 第 1/4 页
S
2,119 行
addsd xmm4, xmm1 addsd xmm7, xmm2 movlpd [rsp + nb301_fixH2], xmm3 movlpd [rsp + nb301_fiyH2], xmm4 movlpd [rsp + nb301_fizH2], xmm7 mov rdi, [rbp + nb301_faction] ;# update j forces ;# update j forces with water H1 addsd xmm0, [rsp + nb301_fjx] addsd xmm1, [rsp + nb301_fjy] addsd xmm2, [rsp + nb301_fjz] ;# the fj's - start by accumulating forces from memory movlpd xmm3, [rdi + rax*8] movlpd xmm4, [rdi + rax*8 + 8] movlpd xmm5, [rdi + rax*8 + 16] addsd xmm3, xmm0 addsd xmm4, xmm1 addsd xmm5, xmm2 movlpd [rdi + rax*8], xmm3 movlpd [rdi + rax*8 + 8], xmm4 movlpd [rdi + rax*8 + 16], xmm5.nb301_updateouterdata: mov ecx, [rsp + nb301_ii3] mov rdi, [rbp + nb301_faction] mov rsi, [rbp + nb301_fshift] mov edx, [rsp + nb301_is3] ;# accumulate Oi forces in xmm0, xmm1, xmm2 movapd xmm0, [rsp + nb301_fixO] movapd xmm1, [rsp + nb301_fiyO] movapd xmm2, [rsp + nb301_fizO] movhlps xmm3, xmm0 movhlps xmm4, xmm1 movhlps xmm5, xmm2 addsd xmm0, xmm3 addsd xmm1, xmm4 addsd xmm2, xmm5 ;# sum is in low xmm0-xmm2 movapd xmm3, xmm0 movapd xmm4, xmm1 movapd xmm5, xmm2 ;# increment i force movsd xmm3, [rdi + rcx*8] movsd xmm4, [rdi + rcx*8 + 8] movsd xmm5, [rdi + rcx*8 + 16] subsd xmm3, xmm0 subsd xmm4, xmm1 subsd xmm5, xmm2 movsd [rdi + rcx*8], xmm3 movsd [rdi + rcx*8 + 8], xmm4 movsd [rdi + rcx*8 + 16], xmm5 ;# accumulate force in xmm6/xmm7 for fshift movapd xmm6, xmm0 movsd xmm7, xmm2 unpcklpd xmm6, xmm1 ;# accumulate H1i forces in xmm0, xmm1, xmm2 movapd xmm0, [rsp + nb301_fixH1] movapd xmm1, [rsp + nb301_fiyH1] movapd xmm2, [rsp + nb301_fizH1] movhlps xmm3, xmm0 movhlps xmm4, xmm1 movhlps xmm5, xmm2 addsd xmm0, xmm3 addsd xmm1, xmm4 addsd xmm2, xmm5 ;# sum is in low xmm0-xmm2 ;# increment i force movsd xmm3, [rdi + rcx*8 + 24] movsd xmm4, [rdi + rcx*8 + 32] movsd xmm5, [rdi + rcx*8 + 40] subsd xmm3, xmm0 subsd xmm4, xmm1 subsd xmm5, xmm2 movsd [rdi + rcx*8 + 24], xmm3 movsd [rdi + rcx*8 + 32], xmm4 movsd [rdi + rcx*8 + 40], xmm5 ;# accumulate force in xmm6/xmm7 for fshift addsd xmm7, xmm2 unpcklpd xmm0, xmm1 addpd xmm6, xmm0 ;# accumulate H2i forces in xmm0, xmm1, xmm2 movapd xmm0, [rsp + nb301_fixH2] movapd xmm1, [rsp + nb301_fiyH2] movapd xmm2, [rsp + nb301_fizH2] movhlps xmm3, xmm0 movhlps xmm4, xmm1 movhlps xmm5, xmm2 addsd xmm0, xmm3 addsd xmm1, xmm4 addsd xmm2, xmm5 ;# sum is in low xmm0-xmm2 movapd xmm3, xmm0 movapd xmm4, xmm1 movapd xmm5, xmm2 ;# increment i force movsd xmm3, [rdi + rcx*8 + 48] movsd xmm4, [rdi + rcx*8 + 56] movsd xmm5, [rdi + rcx*8 + 64] subsd xmm3, xmm0 subsd xmm4, xmm1 subsd xmm5, xmm2 movsd [rdi + rcx*8 + 48], xmm3 movsd [rdi + rcx*8 + 56], xmm4 movsd [rdi + rcx*8 + 64], xmm5 ;# accumulate force in xmm6/xmm7 for fshift addsd xmm7, xmm2 unpcklpd xmm0, xmm1 addpd xmm6, xmm0 ;# increment fshift force movlpd xmm3, [rsi + rdx*8] movhpd xmm3, [rsi + rdx*8 + 8] movsd xmm4, [rsi + rdx*8 + 16] subpd xmm3, xmm6 subsd xmm4, xmm7 movlpd [rsi + rdx*8], xmm3 movhpd [rsi + rdx*8 + 8], xmm3 movsd [rsi + rdx*8 + 16], xmm4 ;# get n from stack mov esi, [rsp + nb301_n] ;# get group index for i particle mov rdx, [rbp + nb301_gid] ;# base of gid[] mov edx, [rdx + rsi*4] ;# ggid=gid[n] ;# accumulate total potential energy and update it movapd xmm7, [rsp + nb301_vctot] ;# accumulate movhlps xmm6, xmm7 addsd xmm7, xmm6 ;# low xmm7 has the sum now ;# add earlier value from mem mov rax, [rbp + nb301_Vc] addsd xmm7, [rax + rdx*8] ;# move back to mem movsd [rax + rdx*8], xmm7 ;# finish if last mov ecx, [rsp + nb301_nn1] ;# esi already loaded with n inc esi sub ecx, esi jz .nb301_outerend ;# not last, iterate outer loop once more! mov [rsp + nb301_n], esi jmp .nb301_outer.nb301_outerend: ;# check if more outer neighborlists remain mov ecx, [rsp + nb301_nri] ;# esi already loaded with n above sub ecx, esi jz .nb301_end ;# non-zero, do one more workunit jmp .nb301_threadloop.nb301_end: mov eax, [rsp + nb301_nouter] mov ebx, [rsp + nb301_ninner] mov rcx, [rbp + nb301_outeriter] mov rdx, [rbp + nb301_inneriter] mov [rcx], eax mov [rdx], ebx add rsp, 872 emms pop r15 pop r14 pop r13 pop r12 pop rbx pop rbp ret.globl nb_kernel301nf_x86_64_sse2.globl _nb_kernel301nf_x86_64_sse2nb_kernel301nf_x86_64_sse2: _nb_kernel301nf_x86_64_sse2: ;# Room for return address and rbp (16 bytes).equiv nb301nf_fshift, 16.equiv nb301nf_gid, 24.equiv nb301nf_pos, 32.equiv nb301nf_faction, 40.equiv nb301nf_charge, 48.equiv nb301nf_p_facel, 56.equiv nb301nf_argkrf, 64.equiv nb301nf_argcrf, 72.equiv nb301nf_Vc, 80.equiv nb301nf_type, 88.equiv nb301nf_p_ntype, 96.equiv nb301nf_vdwparam, 104.equiv nb301nf_Vvdw, 112.equiv nb301nf_p_tabscale, 120.equiv nb301nf_VFtab, 128.equiv nb301nf_invsqrta, 136.equiv nb301nf_dvda, 144.equiv nb301nf_p_gbtabscale, 152.equiv nb301nf_GBtab, 160.equiv nb301nf_p_nthreads, 168.equiv nb301nf_count, 176.equiv nb301nf_mtx, 184.equiv nb301nf_outeriter, 192.equiv nb301nf_inneriter, 200.equiv nb301nf_work, 208 ;# stack offsets for local variables ;# bottom of stack is cache-aligned for sse use .equiv nb301nf_ixO, 0.equiv nb301nf_iyO, 16.equiv nb301nf_izO, 32.equiv nb301nf_ixH1, 48.equiv nb301nf_iyH1, 64.equiv nb301nf_izH1, 80.equiv nb301nf_ixH2, 96.equiv nb301nf_iyH2, 112.equiv nb301nf_izH2, 128.equiv nb301nf_iqO, 144.equiv nb301nf_iqH, 160.equiv nb301nf_qqO, 176.equiv nb301nf_qqH, 192.equiv nb301nf_rinvO, 208.equiv nb301nf_rinvH1, 224.equiv nb301nf_rinvH2, 240.equiv nb301nf_rO, 256.equiv nb301nf_rH1, 272.equiv nb301nf_rH2, 288.equiv nb301nf_tsc, 304.equiv nb301nf_vctot, 320.equiv nb301nf_half, 336.equiv nb301nf_three, 352.equiv nb301nf_is3, 368.equiv nb301nf_ii3, 372.equiv nb301nf_nri, 376.equiv nb301nf_iinr, 384.equiv nb301nf_jindex, 392.equiv nb301nf_jjnr, 400.equiv nb301nf_shift, 408.equiv nb301nf_shiftvec, 416.equiv nb301nf_facel, 424.equiv nb301nf_innerjjnr, 432.equiv nb301nf_innerk, 440.equiv nb301nf_n, 444.equiv nb301nf_nn1, 448.equiv nb301nf_nouter, 452.equiv nb301nf_ninner, 456 push rbp mov rbp, rsp push rbx emms push r12 push r13 push r14 push r15 sub rsp, 472 ;# local variable stack space (n*16+8) ;# zero 32-bit iteration counters mov eax, 0 mov [rsp + nb301nf_nouter], eax mov [rsp + nb301nf_ninner], eax mov edi, [rdi] mov [rsp + nb301nf_nri], edi mov [rsp + nb301nf_iinr], rsi mov [rsp + nb301nf_jindex], rdx mov [rsp + nb301nf_jjnr], rcx mov [rsp + nb301nf_shift], r8 mov [rsp + nb301nf_shiftvec], r9 mov rsi, [rbp + nb301nf_p_facel] movsd xmm0, [rsi] movsd [rsp + nb301nf_facel], xmm0 mov rax, [rbp + nb301nf_p_tabscale] movsd xmm3, [rax] shufpd xmm3, xmm3, 0 movapd [rsp + nb301nf_tsc], xmm3 ;# create constant floating-point factors on stack mov eax, 0x00000000 ;# lower half of double half IEEE (hex) mov ebx, 0x3fe00000 mov [rsp + nb301nf_half], eax mov [rsp + nb301nf_half+4], ebx movsd xmm1, [rsp + nb301nf_half] shufpd xmm1, xmm1, 0 ;# splat to all elements movapd xmm3, xmm1 addpd xmm3, xmm3 ;# one movapd xmm2, xmm3 addpd xmm2, xmm2 ;# two addpd xmm3, xmm2 ;# three movapd [rsp + nb301nf_half], xmm1 movapd [rsp + nb301nf_three], xmm3 ;# assume we have at least one i particle - start directly mov rcx, [rsp + nb301nf_iinr] ;# rcx = pointer into iinr[] mov ebx, [rcx] ;# ebx =ii mov rdx, [rbp + nb301nf_charge] movsd xmm3, [rdx + rbx*8] movsd xmm4, [rdx + rbx*8 + 8] mov rsi, [rbp + nb301nf_p_facel] movsd xmm0, [rsi] movsd xmm5, [rsp + nb301nf_facel] mulsd xmm3, xmm5 mulsd xmm4, xmm5 shufpd xmm3, xmm3, 0 shufpd xmm4, xmm4, 0 movapd [rsp + nb301nf_iqO], xmm3 movapd [rsp + nb301nf_iqH], xmm4 .nb301nf_threadloop: mov rsi, [rbp + nb301nf_count] ;# pointer to sync counter mov eax, [rsi].nb301nf_spinlock: mov ebx, eax ;# ebx=*count=nn0 add ebx, 1 ;# ebx=nn1=nn0+10 lock cmpxchg [esi], ebx ;# write nn1 to *counter, ;# if it hasnt changed. ;# or reread *counter to eax. pause ;# -> better p4 performance jnz .nb301nf_spinlock ;# if(nn1>nri) nn1=nri mov ecx, [rsp + nb301nf_nri] mov edx, ecx sub ecx, ebx cmovle ebx, edx ;# if(nn1>nri) nn1=nri ;# Cleared the spinlock if we got here. ;# eax contains nn0, ebx contains nn1. mov [rsp + nb301nf_n], eax mov [rsp + nb301nf_nn1], ebx sub ebx, eax ;# calc number of outer lists mov esi, eax ;# copy n to esi jg .nb301nf_outerstart jmp .nb301nf_end.nb301nf_outerstart: ;# ebx contains number of outer iterations add ebx, [rsp + nb301nf_nouter] mov [rsp + nb301nf_nouter], ebx.nb301nf_outer: mov rax, [rsp + nb301nf_shift] ;# rax = pointer into shift[] mov ebx, [rax+rsi*4] ;# rbx=shift[n] lea rbx, [rbx + rbx*2] ;# rbx=3*is mov rax, [rsp + nb301nf_shiftvec] ;# rax = base of shiftvec[] movsd xmm0, [rax + rbx*8] movsd xmm1, [rax + rbx*8 + 8] movsd xmm2, [rax + rbx*8 + 16] mov rcx, [rsp + nb301nf_iinr] ;# rcx = pointer into iinr[] mov ebx, [rcx+rsi*4] ;# ebx =ii movapd xmm3, xmm0 movapd xmm4, xmm1 movapd xmm5, xmm2 lea rbx, [rbx + rbx*2] ;# rbx = 3*ii=ii3 mov rax, [rbp + nb301nf_pos] ;# rax = base of pos[] mov [rsp + nb301nf_ii3], ebx addsd xmm3, [rax + rbx*8] addsd xmm4, [rax + rbx*8 + 8] addsd xmm5, [rax + rbx*8 + 16] shufpd xmm3, xmm3, 0 shufpd xmm4, xmm4, 0 shufpd xmm5, xmm5, 0 movapd [rsp + nb301nf_ixO], xmm3 movapd [rsp + nb301nf_iyO], xmm4 movapd [rsp + nb301nf_izO], xmm5 movsd xmm3, xmm0 movsd xmm4, xmm1 movsd xmm5, xmm2 addsd xmm0, [rax + rbx*8 + 24] addsd xmm1, [rax + rbx*8 + 32] addsd xmm2, [rax + rbx*8 + 40] addsd xmm3, [rax + rbx*8 + 48] addsd xmm4, [rax + rbx*8 + 56] addsd xmm5, [rax + rbx*8 + 64] shufpd xmm0, xmm0, 0 shufpd xmm1, xmm1, 0 shufpd xmm2, xmm2, 0 shufpd xmm3, xmm3, 0 shufpd xmm4, xmm4, 0 shufpd xmm5, xmm5, 0 movapd [rsp + nb301nf_ixH1], xmm0 movapd [rsp + nb301nf_iyH1], xmm1 movapd [rsp + nb301nf_izH1], xmm2 movapd [rsp + nb301nf_ixH2], xmm3 movapd [rsp + nb301nf_iyH2], xmm4 movapd [rsp + nb301nf_izH2], xmm5 ;# clear vctot xorpd xmm4, xmm4 movapd [rsp + nb301nf_vctot], xmm4 mov rax, [rsp + nb301nf_jindex] mov ecx, [rax + rsi*4] ;# jindex[n] mov edx, [rax + rsi*4 + 4] ;# jindex[n+1] sub edx, ecx ;# number of innerloop atoms mov rsi, [rbp + nb301nf_pos] mov rax, [rsp + nb301nf_jjnr] shl ecx, 2 add rax, rcx mov [rsp + nb301nf_innerjjnr], rax ;# pointer to jjnr[nj0] mov ecx, edx sub edx, 2 add ecx, [rsp + nb301nf_ninner] mov [rsp + nb301nf_ninner], ecx add edx, 0 mov [rsp + nb301nf_innerk], edx ;# number of innerloop atoms jge .nb301nf_unroll_loop jmp .nb301nf_checksingle.nb301nf_unroll_loop: ;# twice unrolled innerloop here mov rdx, [rsp + nb301nf_innerjjnr] ;# pointer to jjnr[k] mov eax, [rdx] mov ebx, [rdx + 4] add qword ptr [rsp + nb301nf_innerjjnr], 8 ;# advance pointer (unrolled 2) mov rsi, [rbp + nb301nf_charge] ;# base of charge[] movlpd xmm3, [rsi + rax*8] movhpd xmm3, [rsi + rbx*8] movapd xmm4, xmm3 mulpd xmm3, [rsp + nb301nf_iqO] mulpd xmm4, [rsp + nb301nf_iqH] movapd [rsp + nb301nf_qqO], xmm3 movapd [rsp + nb301nf_qqH], xmm4 mov rsi, [rbp + nb301nf_pos] ;# base of pos[] lea rax, [rax + rax*2] ;# replace jnr with j3 lea rbx, [rbx + rbx*2] ;# move two coordinates to xmm0-xmm2 movlpd xmm0, [rsi + rax*8] movlpd xmm1, [rsi + rax*8 + 8] movlpd xmm2, [rsi + rax*8 + 16] movhpd xmm0, [rsi + rbx*8] movhpd xmm1, [rsi + rbx*8 + 8] movhpd xmm2, [rsi + rbx*8 + 16] ;# move ixO-izO to xmm4-xmm6 movapd xmm4, [rsp + nb301nf_ixO] movapd xmm5, [rsp + nb301nf_iyO] movapd xmm6, [rsp + nb301nf_izO] ;# calc dr subpd xmm4, xmm0 subpd xmm5, xmm1 subpd xmm6, xmm2 ;# square it mulpd xmm4,xmm4 mulpd xmm5,xmm5 mulpd xmm6,xmm6 addpd xmm4, xmm5 addpd xmm4, xmm6 movapd xmm7, xmm4 ;# rsqO in xmm7 ;# move ixH1-izH1 to xmm4-xmm6 movapd xmm4, [rsp + nb301nf_ixH1] movapd xmm5, [rsp + nb301nf_iyH1] movapd xmm6, [rsp + nb301nf_izH1] ;# calc dr subpd xmm4, xmm0 subpd xmm5, xmm1 subpd xmm6, xmm2 ;# square it mulpd xmm4,xmm4 mulpd xmm5,xmm5 mulpd xmm6,xmm6 addpd xmm6, xmm5 addpd xmm6, xmm4 ;# rsqH1 in xmm6 ;# move ixH2-izH2 to xmm3-xmm5 movapd xmm3, [rsp + nb301nf_ixH2] movapd xmm4, [rsp + nb301nf_iyH2] movapd xmm5, [rsp + nb301nf_izH2] ;# calc dr subpd xmm3, xmm0 subpd xmm4, xmm1 subpd xmm5, xmm2 ;# square it mulpd xmm3,xmm3 mulpd xmm4,xmm4 mulpd xmm5,xmm5 addpd xmm5, xmm4 addpd xmm5, xmm3 ;# rsqH2 in xmm5, rsqH1 in xmm6, rsqO in xmm7 ;# start with rsqO - put seed in xmm2 cvtpd2ps xmm2, xmm7 rsqrtps xmm2, xmm2 cvtps2pd xmm2, xmm2 movapd xmm3, xmm2
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