pr.mdp
来自「最著名最快的分子模拟软件」· MDP 代码 · 共 40 行
MDP
40 行
;; User spoel (236); Wed Nov 3 17:12:44 1993; Input file;title = Yocpp = /usr/bin/cppdefine = -DPOSRESconstraints = all-bondsintegrator = mddt = 0.002 ; ps !nsteps = 5000 ; total 10 ps.nstcomm = 1nstxout = 50nstvout = 1000nstfout = 0nstlog = 10nstenergy = 10nstlist = 10ns_type = gridrlist = 1.0rcoulomb = 1.0rvdw = 1.0; Berendsen temperature coupling is on in two groupsTcoupl = berendsentc-grps = Protein SOLtau_t = 0.1 0.1ref_t = 300 300; Energy monitoringenergygrps = Protein SOL; Pressure coupling is not onPcoupl = notau_p = 0.5compressibility = 4.5e-5ref_p = 1.0; Generate velocites is on at 300 K.gen_vel = yesgen_temp = 300.0gen_seed = 173529
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