out.h

C-package of "Long Short-Term Memory" for Protein classification

/*
 * $Id: out.h 1272 2007-05-09 16:26:20Z mhe $
 */
 
extern char *outfile, *weightfile, *selectfile;
extern int epoch, maxepoch, numb_seq, class_err, classnon_err, ges_mod, in_mod_b;
extern int in_mod, out_mod, training_size, windowsize;
extern double epoch_err;

extern int test_size, prot_current_idx;
extern int *length_t;
extern double **inp_t;
extern int **inp_idx_t;
extern char **aaSym_t;

double roctrain(int);
double rocROCNtrain(int);

void reset_net();
void nettest();
void shuffle(int*, int);
void set_sequence(double **, int **, char **, int, int);