initia.h

C-package of "Long Short-Term Memory" for Protein classification

/*
 * $Id: initia.h 1196 2006-10-09 04:30:52 +0000 (Mon, 09 Oct 2006) mhe $
 */
 
extern int epoch, example, numb_seq, weight_up, bias1, num_blocks, in_mod_b, ges_mod;
extern int class_err, classnon_err, seq_cor, block_size[], element, element_t;
extern int in_mod, cell_mod, training_size;

extern int newprot;

extern double init_range, epoch_err, seq_err;
extern double outputbias, bias_memin[], weight_memout[], bias_inp[], bias_out[];

extern double **W;
  /* contribution to update of weight matrix */
extern double **DW, **DWold;
  /* input gates */
extern double *Y_in;
  /* output gates */
extern double *Y_out;
  /* new activation for all units */
extern double *Yk_new;
  /* old activations */
extern double *Yk_old;

void reset_net();
void load_weights(char *);
void load_select(char *);
extern int seprand(int);