neg-test.1.27.1.2.fasta

C-package of "Long Short-Term Memory" for Protein classification

>d3sdha_ 1.1.1.1.1 Hemoglobin I {Ark clam (Scapharca inaequivalvis)}
SVYDAAAQLTADVKKDLRDSWKVIGSDKKGNGVALMTTLFADNQETIGYFKRLGNVSQGMANDKLRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAVNHITRKISAAEFGKINGPIKKVLASKNFGDKYANAWAKLVAVVQAAL
>d2hbg__ 1.1.1.1.3 Glycera globin {Marine bloodworm (Glycera dibranchiata)}
GLSAAQRQVIAATWKDIAGADNGAGVGKKCLIKFLSAHPQMAAVFGFSGASDPGVAALGAKVLAQIGVAVSHLGDEGKMVAQMKAVGVRHKGYGNKHIKAQYFEPLGASLLSAMEHRIGGKMNAAAKDAWAAAYADISGALISGLQS
>d1eco__ 1.1.1.1.13 Erythrocruorin {Midge (Chironomous thummi thummi), fraction III}
LSADQISTVQASFDKVKGDPVGILYAVFKADPSIMAKFTQFAGKDLESIKGTAPFETHANRIVGFFSKIIGELPNIEADVNTFVASHKPRGVTHDQLNNFRAGFVSYMKAHTDFAGAEAAWGATLDTFFGMIFSKM
>d2gdm__ 1.1.1.1.14 Leghemoglobin {Yellow lupin (Lupinus luteus)}
GALTESQAALVKSSWEEFNANIPKHTHRFFILVLEIAPAAKDLFSFLKGTSEVPQNNPELQAHAGKVFKLVYEAAIQLEVTGVVVTDATLKNLGSVHVSKGVADAHFPVVKEAILKTIKEVVGAKWSEELNSAWTIAYDELAIVIKKEMDDAA
>d2lhb__ 1.1.1.1.43 Lamprey globin {Sea lamprey (Petromyzon marinus)}
PIVDTGSVAPLSAAEKTKIRSAWAPVYSTYETSGVDILVKFFTSTPAAQEFFPKFKGLTTADELKKSADVRWHAERIINAVDDAVASMDDTEKMSMKLRNLSGKHAKSFQVDPEYFKVLAAVIADTVAAGDAGFEKLMSMICILLRSAY
>d1hlb__ 1.1.1.1.46 Hemoglobin {Sea cucumber (Caudina (Molpadia) arenicola)}
XGGTLAIQAQGDLTLAQKKIVRKTWHQLMRNKTSFVTDVFIRIFAYDPSAQNKFPQMAGMSASQLRSSRQMQAHAIRVSSIMSEYVEELDSDILPELLATLARTHDLNKVGADHYNLFAKVLMEALQAELGSDFNEKTRDAWAKAFSVVQAVLLVKHG
>d1alla_ 1.1.1.2.3 Allophycocyanin {Spirulina platensis}
SIVTKSIVNADAEARYLSPGELDRIKSFVTSGERRVRIAETMTGARERIIKQAGDQLFGKRPDVVSPGGNAYGADMTATCLRDLDYYLRLITYGIVAGDVTPIEEIGVVGVREMYKSLGTPIEAIAEGVRAMKSVATSLLSGADAAEAGSYFDYLIGAMS
>d1qgwc_ 1.1.1.2.7 Phycoerythrin {Rhodomonas cs 24}
DAFSRVVTNADSKAAYVGGADLQALKKFISEGNKRLDSVNSIVSNASCIVSDAVSGMICENPSLISPSGXCYTNRRMAACLRDGEIILRYVSYALLSGDASVLEDRCLNGLKETYSSLGVPANSNARAVSIMKACAVAFVNNTASQKKLSTPQGDCSGLASEVGGYFDKVTAAIS
>d1seta1 1.2.5.1.1 (1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27}
MVDLKRLRQEPEVFHRAIREKGVALDLEALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEARLEALLLQVPLPPWPGAP
>d1bsha1 1.2.7.1.1 (87-138) Epsilon subunit of F1F0-ATP synthase C-terminal domain {Escherichia coli}
QDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM
>d1bsna1 1.2.7.1.1 (87-138) Epsilon subunit of F1F0-ATP synthase C-terminal domain {Escherichia coli}
QDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM
>d1isaa1 1.2.8.1.3 (1-82) Fe superoxide dismutase (FeSOD) {Escherichia coli}
SFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAP
>d1b06a1 1.2.8.1.6 (3-92) Fe superoxide dismutase (FeSOD) {Sulfolobus acidocaldarius}
VIQLKRYEFPQLPYKVDALEPYISKDIIDVHYNGHHKGYVNGANSLLDRLEKLIKGDLPQGQYDLQGILRGLTFNINGHKLHAIYWNNMA
>d1ap6a1 1.2.8.1.7 (1-83) Mn superoxide dismutase (MnSOD) {Human (Homo sapiens)}
KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAFVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP
>d1mnga1 1.2.8.1.9 (1-92) Mn superoxide dismutase (MnSOD) {Thermus thermophilus}
PYPFKLPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEKYPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTP
>d1bsma1 1.2.8.1.10 (1-86) Cambialistic superoxide dismutase {Propionibacterium freudenreichii}
AVYTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADFGAINKLEKDLAFNLAGHVNHSVFWKNMAPKG
>d1c53__ 1.3.1.1.3 Cytochrome c6 (synonym: cytochrome c553) {Desulfovibrio vulgaris, different strains}
ADGAALYKSCVGCHGADGSKQAMGVGHAVKGQKADELFKKLKGYADGSYGGEKKAVMTNLVKRYSDEEMKAMADYMSKL
>d1ayg__ 1.3.1.1.10 Cytochrome c552 {Hydrogenobacter thermophilus}
NEQLAKQKGCMACHDLKAKKVGPAYADVAKKYAGRKDAVDYLAGKIKKGGSGVWGSVPMPPQNVTDAEAKQLAQWILSIK
>d1cxc__ 1.3.1.1.19 Cytochrome c2 {Rhodobacter spaeroides}
QEGDPEAGAKAFNQCQTCHVIVDDSGTTIAGRNAKTGPNLYGVVGRTAGTQADFKGYGEGMKEAGAKGLAWDEEHFVQYVQDPTKFLKEYTGDAKAKGKMTFKLKKEADAHNIWAYLQQVAVRP
>d1co6a_ 1.3.1.1.20 Cytochrome c2 {Rhodopseudomonas viridis}
QDAASGEQVFKQCLVCHSIGPGAKNKVGPVLNGLFGRHSGTIEGFAYSDANKNSGITWTEEVFREYIRDPKAKIPGTKMIFAGVKDEQKVSDLIAYIKQFNADGSKK
>d1hroa_ 1.3.1.1.21 Cytochrome c2 {Rhodopila globiformis}
SAPPGDPVEGKHLFHTICITCHTDIKGANKVGPSLYGVVGRHSGIEPGYNYSEANIKSGIVWTPDVLFKYIEHPQKIVPGTKMGYPGQPDPQKRADIIAYLETLK
>d1cc5__ 1.3.1.1.23 Cytochrome c5 {Azotobacter vinelandii}
GGGARSGDDVVAKYCNACHGTGLLNAPKVGDSAAWKTRADAKGGLDGLLAQSLSGLNAMPPKGTCADCSDDELKAAIGKMSGL
>d2mtac_ 1.3.1.1.26 Cytochrome c551 {Paracoccus denitrificans}
APQFFNIIDGSPLNFDDAMEEGRDTEAVKHFLETGENVYNEDPEILPEAEELYAGMCSGCHGHYAEGKIGPGLNDAYWTYPGNETDVGLFSTLYGGATGQMGPMWGSLTLDEMLRTMAWVRHLYTGDPKDASWLTDEQKAGFTPFQP
>d1gks__ 1.3.1.1.27 Cytochrome c551 {Ectothiorhodospira halophila}
DGESIYINGTAPTCSSCHDRGVAGAPELNAPEDWADRPSSVDELVESTLAGKGAMPAYDGRADREDLVKAIEYMLSTL
>d1qksa1 1.3.1.2.3 (9-135) N-terminal (heme c) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans}
DPAAALEDHKTRTDNRYEPSLDNLAQQDVAAPGAPEGVTALSDAQYNEANKIYFERCAGCHGVLRKGATGKALTPDLTRDLGFDYLQSFITYASPAGMPNWGTSGELSAEQVDLMANYLLLDPAAPP
>d1etpa1 1.3.1.3.1 (1-92) Cytochrome c4 {Pseudomonas stutzeri}
AGDAEAGQGKVAVCGACHGVDGNSPAPNFPKLAGQGERYLLKQLQDIKAGSTPGAPEGVGRKVLEMTGMLDPLSDQDLEDIAAYFSSQKGSV
>d1etpa2 1.3.1.3.1 (93-190) Cytochrome c4 {Pseudomonas stutzeri}
GYADPALAKQGEKLFRGGKLDQGMPACTGCHAPNGVGNDLAGFPKLGGQHAAYTAKQLTDFREGNRTNDGDTMIMRGVAAKLSNKDIEALSSYIQGLH
>d1hddc_ 1.4.1.1.1 Engrailed Homeodomain {Drosophila melanogaster}
RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKKS
>d2hddb_ 1.4.1.1.1 Engrailed Homeodomain {Drosophila melanogaster}
KRPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFKNKRAKIK
>d3hdda_ 1.4.1.1.1 Engrailed Homeodomain {Drosophila melanogaster}
RTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKKS
>d1akha_ 1.4.1.1.2 Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae)}
ISPQARAFLEEVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRS
>d1yrna_ 1.4.1.1.2 Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae)}
ISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRS
>d1mnmc_ 1.4.1.1.3 mat alpha2 Homeodomain {Baker's yeast (Saccharomyces cerevisiae)}
GLVFNVVTQDMINKSTKPYRGHRFTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRKEKT
>d1lfb__ 1.4.1.1.4 Transcription factor LFB1 {Rat (Rattus rattus)}
RFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHK
>d1octc1 1.4.1.1.5 (102-161) Oct-1 POU Homeodomain {Human (Homo sapiens)}
RKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINP
>d1au7a1 1.4.1.1.6 (103-160) Pit-1 POU homeodomain {Rat (Rattus norvegicus)}
KRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK
>d9anta_ 1.4.1.1.13 Antennapedia Homeodomain {Drosophila melanogaster}
RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKEN
>d1ftz__ 1.4.1.1.16 Fushi Tarazu protein {Fruit fly (Drosophila melanogaster)}
MDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTLDSSPEH
>d1nk3p_ 1.4.1.1.17 VND/NK-2 protein {Fruit fly (Drosophila melanogaster)}
KKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNE
>d1hcra_ 1.4.1.2.1 HIN recombinase (DNA-binding domain) {Synthetic}
GRPRAINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYFPASSIKKRMN
>d1gdtb1 1.4.1.2.2 (141-183) gamma,delta resolvase (C-terminal domain) {Escherichia coli}
GRKRKIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN
>d1tc3c_ 1.4.1.2.3 Transposase tc3a1-65 {Caenorhabditis elegans}
PRGSALSDTERAQLDVMKLLNVSLHEMSRKISRSRHCIRVYLKDPVSYGTS
>d2ezl__ 1.4.1.2.4 Ibeta subdomain of the mu end DNA-binding domain of phage mu transposase {Bacteriophage mu}
MIARPTLEAHDYDREALWSKWDNASDSQRRLAEKWLPAVQAADEMLNQGISTKTAFATVAGHYQVSASTLRDKYYQVQKFAKPDWAAALVDGRGASRRN
>d1idz__ 1.4.1.3.2 c-Myb, DNA-binding domain {Mouse (Mus musculus)}
MEVKKTSWTEEEDRILYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV
>d1mbg__ 1.4.1.3.2 c-Myb, DNA-binding domain {Mouse (Mus musculus)}
LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPE
>d1mbj__ 1.4.1.3.2 c-Myb, DNA-binding domain {Mouse (Mus musculus)}
VKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV
>d1msec2 1.4.1.3.2 (144-193) c-Myb, DNA-binding domain {Mouse (Mus musculus)}
KTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKV
>d1a5j_2 1.4.1.3.3 (56-110) b-Myb DNA binding domain {Chicken (Gallus gallus)}
EVKKSSWTEEEDRIIFEAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKVDT
>d1ba5__ 1.4.1.4.1 DNA-binding domain of human telomeric protein, htrf1 {Human (Homo sapiens)}
RKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKL
>d1igna1 1.4.1.6.1 (360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae)}
KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDDGNLIKTKVLPPSI
>d1igna2 1.4.1.6.1 (446-594) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae)}
KRKFSADEDYTLAIAVKKQFYRDLFQIDPDTGRSLITDEDTPTAIARRNMTMDPNHVPGSEPNFAAYRTQSRRGPIAREFFKHFAEEHAAHTENAWRDRFRKFLLAYGIDDYISYYEAEKAQNREPEPMKNLTNRPKRPGVPTPGNYNS
>d1d5ya1 1.4.1.8.2 (3-56) Rob transcription factor, N-terminal domain {Escherichia coli}
QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRA
>d1d5ya2 1.4.1.8.2 (57-121) Rob transcription factor, N-terminal domain {Escherichia coli}
RRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLG
>d1c20a_ 1.4.3.1.1 DNA-binding domain from the dead ringer protein {Fruit fly (Drosophila melanogaster)}
GWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNR
>d1bia_1 1.4.5.1.1 (1-63) Biotin repressor, N-terminal domain {Escherichia coli}
MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSLPEP
>d1aoy__ 1.4.5.3.1 Arginine repressor (ArgR), N-terminal DNA-binding domain {Escherichia coli}
MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTT
>d1b4aa1 1.4.5.3.2 (4-78) Arginine repressor (ArgR), N-terminal DNA-binding domain {Bacillus stearothermophilus}
GQRHIKIREIIMSNDIETQDELVDRLREAGFNVTQATVSRDIKEMQLVKVPMANGRYKYSLPSDQRFNPLQKLKR
>d2cgpa1 1.4.5.4.1 (138-207) Catabolite gene activator protein (CAP), C-terminal domain {Escherichia coli}
DVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYG
>d1opc__ 1.4.5.5.1 OmpR, C-terminal DNA-binding domain {Escherichia coli}
VIAFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPD
>d1qqia_ 1.4.5.5.2 PhoB {Escherichia coli}
MAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF
>d1smta_ 1.4.5.6.1 SmtB repressor {Cyanobacteria (Synechococcus), pcc7942}
ELQAIAPEVAQSLAEFFAVLADPNRLRLLSLLARSELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQGRHVYYQLQDHHIVALYQNALDHLQEC
>d1bm9a_ 1.4.5.7.1 Replication terminator protein (RTP) {Bacillus subtilis}
EEKRSSTGFLVKQRAFLKLYMITMTEQERLYGLKLLEVLRSEFKEIGFKPNHTEVYRSLHELLDDGILKQIKVKKEGAKLQEVVLYQFKDYEAAKLYKKQLKVELDRCKKLIEKALSDNF
>d2foka2 1.4.5.11.1 (144-286) Restriction endonuclease FokI, N-terminal (recognition) domain {Flavobacterium okeanokoites}
GSAIEKEILIEAISSYPPAIRILTLLEDGQHLTKFDLGKNLGFSGESGFTSLPEGILLDTLANAMPKDKGEIRNNWEGSSDKYARMIGGWLDKLGLVKQGKKEFIIPTLGKPDNKEFISHAFKITGEGLKVLRRAKGSTKFTR
>d1hsta_ 1.4.5.12.1 Histone H5, globular domain {Chicken (Gallus gallus)}
SHPTYSEMIAAAIRAEKSRGGSSRQSIQKYIKSHYKVGHNADLQIKLSIRRLLAAGVLKQTKGVGASGSFRLAK
>d1ghc__ 1.4.5.12.2 Histone H1, globular domain {Chicken (Gallus gallus)}
MAGPSVTELITKAVSASKERKGLSLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGSFRLSK
>d2hfh__ 1.4.5.14.1 Genesis {Rat (Rattus norvegicus)}
MVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFL
>d1cf7a_ 1.4.5.16.1 Cell cycle transcription factor e2f-dp {Human (Homo sapiens)}