📄 tunerf.rd
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\name{tuneRF}\alias{tuneRF}\title{Tune randomForest for the optimal mtry parameter}\description{ Starting with the default value of mtry, search for the optimal value (with respect to Out-of-Bag error estimate) of mtry for randomForest.}\usage{tuneRF(x, y, mtryStart, ntreeTry=50, stepFactor=2, improve=0.05, trace=TRUE, plot=TRUE, doBest=FALSE, ...)}\arguments{ \item{x}{matrix or data frame of predictor variables} \item{y}{response vector (factor for classification, numeric for regression)} \item{mtryStart}{starting value of mtry; default is the same as in \code{\link{randomForest}}} \item{ntreeTry}{number of trees used at the tuning step} \item{stepFactor}{at each iteration, mtry is inflated (or deflated) by this value} \item{improve}{the (relative) improvement in OOB error must be by this much for the search to continue} \item{trace}{whether to print the progress of the search} \item{plot}{whether to plot the OOB error as function of mtry} \item{doBest}{whether to run a forest using the optimal mtry found} \item{...}{options to be given to \code{\link{randomForest}}}}\value{ If \code{doBest=FALSE} (default), it returns a matrix whose first column contains the mtry values searched, and the second column the corresponding OOB error. If \code{doBest=TRUE}, it returns the \code{\link{randomForest}} object produced with the optimal \code{mtry}.}%\details{%}%\references{%}\seealso{\code{\link{randomForest}}}\examples{data(fgl, package="MASS")fgl.res <- tuneRF(fgl[,-10], fgl[,10], stepFactor=1.5)}%\author{}\keyword{classif}\keyword{tree}
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