iohb.c

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    if ( sscanf(line,"%*i%*i%*i%i",Valcrd) != 1) *Valcrd = 0;    if ( sscanf(line,"%*i%*i%*i%*i%i",Rhscrd) != 1) *Rhscrd = 0;/*  Third line:   */    fgets(line, BUFSIZ, in_file);    if ( sscanf(line,"%*s") < 0 )         IOHBTerminate("iohb.c: Null (or blank) third line of HB file.\n");    if ( sscanf(line, "%3c", Type) != 1)         IOHBTerminate("iohb.c: Invalid Type info, line 3 of Harwell-Boeing file.\n");    upcase(Type);    if ( sscanf(line,"%*3c%i",Nrow) != 1) *Nrow = 0 ;    if ( sscanf(line,"%*3c%*i%i",Ncol) != 1) *Ncol = 0 ;    if ( sscanf(line,"%*3c%*i%*i%i",Nnzero) != 1) *Nnzero = 0 ;    if ( sscanf(line,"%*3c%*i%*i%*i%i",&Neltvl) != 1) Neltvl = 0 ;/*  Fourth line:  */    fgets(line, BUFSIZ, in_file);    if ( sscanf(line,"%*s") < 0 )         IOHBTerminate("iohb.c: Null (or blank) fourth line of HB file.\n");    if ( sscanf(line, "%16c",Ptrfmt) != 1)        IOHBTerminate("iohb.c: Invalid format info, line 4 of Harwell-Boeing file.\n");     if ( sscanf(line, "%*16c%16c",Indfmt) != 1)        IOHBTerminate("iohb.c: Invalid format info, line 4 of Harwell-Boeing file.\n");     if ( sscanf(line, "%*16c%*16c%20c",Valfmt) != 1)         IOHBTerminate("iohb.c: Invalid format info, line 4 of Harwell-Boeing file.\n");     sscanf(line, "%*16c%*16c%*20c%20c",Rhsfmt);    *(Ptrfmt+16) = (char) NULL;    *(Indfmt+16) = (char) NULL;    *(Valfmt+20) = (char) NULL;    *(Rhsfmt+20) = (char) NULL;   /*  (Optional) Fifth line: */    if (*Rhscrd != 0 )    {        fgets(line, BUFSIZ, in_file);       if ( sscanf(line,"%*s") < 0 )            IOHBTerminate("iohb.c: Null (or blank) fifth line of HB file.\n");       if ( sscanf(line, "%3c", Rhstype) != 1)          IOHBTerminate("iohb.c: Invalid RHS type information, line 5 of Harwell-Boeing file.\n");       if ( sscanf(line, "%*3c%i", Nrhs) != 1) *Nrhs = 0;       if ( sscanf(line, "%*3c%*i%i", &Nrhsix) != 1) Nrhsix = 0;    }    return 1;}int readHB_mat_double(const char* filename, int colptr[], int rowind[],                                                                  double val[]){/****************************************************************************//*  This function opens and reads the specified file, interpreting its      *//*  contents as a sparse matrix stored in the Harwell/Boeing standard       *//*  format and creating compressed column storage scheme vectors to hold    *//*  the index and nonzero value information.                                *//*                                                                          *//*    ----------                                                            *//*    **CAVEAT**                                                            *//*    ----------                                                            *//*  Parsing real formats from Fortran is tricky, and this file reader       *//*  does not claim to be foolproof.   It has been tested for cases when     *//*  the real values are printed consistently and evenly spaced on each      *//*  line, with Fixed (F), and Exponential (E or D) formats.                 *//*                                                                          *//*  **  If the input file does not adhere to the H/B format, the  **        *//*  **             results will be unpredictable.                 **        *//*                                                                          *//****************************************************************************/    FILE *in_file;    int i,j,ind,col,offset,count,last,Nrhs;    int Ptrcrd, Indcrd, Valcrd, Rhscrd;    int Nrow, Ncol, Nnzero, Nentries;    int Ptrperline, Ptrwidth, Indperline, Indwidth;    int Valperline, Valwidth, Valprec;    int Valflag;           /* Indicates 'E','D', or 'F' float format */    char* ThisElement;    char Title[73], Key[8], Type[4], Rhstype[4];    char Ptrfmt[17], Indfmt[17], Valfmt[21], Rhsfmt[21];    char line[BUFSIZ];    if ( (in_file = fopen( filename, "r")) == NULL ) {       fprintf(stderr,"Error: Cannot open file: %s\n",filename);       return 0;    }    readHB_header(in_file, Title, Key, Type, &Nrow, &Ncol, &Nnzero, &Nrhs,                  Ptrfmt, Indfmt, Valfmt, Rhsfmt,                  &Ptrcrd, &Indcrd, &Valcrd, &Rhscrd, Rhstype);/*  Parse the array input formats from Line 3 of HB file  */    ParseIfmt(Ptrfmt,&Ptrperline,&Ptrwidth);    ParseIfmt(Indfmt,&Indperline,&Indwidth);    if ( Type[0] != 'P' ) {          /* Skip if pattern only  */    ParseRfmt(Valfmt,&Valperline,&Valwidth,&Valprec,&Valflag);    }/*  Read column pointer array:   */    offset = 1-_SP_base;  /* if base 0 storage is declared (via macro definition), */                          /* then storage entries are offset by 1                  */    ThisElement = (char *) malloc(Ptrwidth+1);    if ( ThisElement == NULL ) IOHBTerminate("Insufficient memory for ThisElement.");    *(ThisElement+Ptrwidth) = (char) NULL;    count=0;    for (i=0;i<Ptrcrd;i++)    {       fgets(line, BUFSIZ, in_file);       if ( sscanf(line,"%*s") < 0 )          IOHBTerminate("iohb.c: Null (or blank) line in pointer data region of HB file.\n");       col =  0;       for (ind = 0;ind<Ptrperline;ind++)       {          if (count > Ncol) break;          strncpy(ThisElement,line+col,Ptrwidth);  /* ThisElement = substr(line,col,Ptrwidth); */          colptr[count] = atoi(ThisElement)-offset;          count++; col += Ptrwidth;       }    }    free(ThisElement);/*  Read row index array:  */    ThisElement = (char *) malloc(Indwidth+1);    if ( ThisElement == NULL ) IOHBTerminate("Insufficient memory for ThisElement.");    *(ThisElement+Indwidth) = (char) NULL;    count = 0;    for (i=0;i<Indcrd;i++)    {       fgets(line, BUFSIZ, in_file);       if ( sscanf(line,"%*s") < 0 )          IOHBTerminate("iohb.c: Null (or blank) line in index data region of HB file.\n");       col =  0;       for (ind = 0;ind<Indperline;ind++)       {          if (count == Nnzero) break;          strncpy(ThisElement,line+col,Indwidth);/*        ThisElement = substr(line,col,Indwidth); */          rowind[count] = atoi(ThisElement)-offset;          count++; col += Indwidth;       }    }    free(ThisElement);/*  Read array of values:  */    if ( Type[0] != 'P' ) {          /* Skip if pattern only  */       if ( Type[0] == 'C' ) Nentries = 2*Nnzero;           else Nentries = Nnzero;    ThisElement = (char *) malloc(Valwidth+1);    if ( ThisElement == NULL ) IOHBTerminate("Insufficient memory for ThisElement.");    *(ThisElement+Valwidth) = (char) NULL;    count = 0;    for (i=0;i<Valcrd;i++)    {       fgets(line, BUFSIZ, in_file);       if ( sscanf(line,"%*s") < 0 )          IOHBTerminate("iohb.c: Null (or blank) line in value data region of HB file.\n");       if (Valflag == 'D')  {          while( strchr(line,'D') ) *strchr(line,'D') = 'E';/*           *strchr(Valfmt,'D') = 'E'; */       }       col =  0;       for (ind = 0;ind<Valperline;ind++)       {          if (count == Nentries) break;          strncpy(ThisElement,line+col,Valwidth);          /*ThisElement = substr(line,col,Valwidth);*/          if ( Valflag != 'F' && strchr(ThisElement,'E') == NULL ) {              /* insert a char prefix for exp */             last = strlen(ThisElement);             for (j=last+1;j>=0;j--) {                ThisElement[j] = ThisElement[j-1];                if ( ThisElement[j] == '+' || ThisElement[j] == '-' ) {                   ThisElement[j-1] = Valflag;                                       break;                }             }          }          val[count] = atof(ThisElement);          count++; col += Valwidth;       }    }    free(ThisElement);    }    fclose(in_file);    return 1;}int readHB_newmat_double(const char* filename, int* M, int* N, int* nonzeros,                          int** colptr, int** rowind, double** val){        int Nrhs;        char *Type;        readHB_info(filename, M, N, nonzeros, &Type, &Nrhs);        *colptr = (int *)malloc((*N+1)*sizeof(int));        if ( *colptr == NULL ) IOHBTerminate("Insufficient memory for colptr.\n");        *rowind = (int *)malloc(*nonzeros*sizeof(int));        if ( *rowind == NULL ) IOHBTerminate("Insufficient memory for rowind.\n");        if ( Type[0] == 'C' ) {/*   fprintf(stderr, "Warning: Reading complex data from HB file %s.\n",filename);   fprintf(stderr, "         Real and imaginary parts will be interlaced in val[].\n");*/           /* Malloc enough space for real AND imaginary parts of val[] */           *val = (double *)malloc(*nonzeros*sizeof(double)*2);           if ( *val == NULL ) IOHBTerminate("Insufficient memory for val.\n");        } else {           if ( Type[0] != 'P' ) {                /* Malloc enough space for real array val[] */             *val = (double *)malloc(*nonzeros*sizeof(double));             if ( *val == NULL ) IOHBTerminate("Insufficient memory for val.\n");           }        }  /* No val[] space needed if pattern only */        return readHB_mat_double(filename, *colptr, *rowind, *val);}int readHB_aux_double(const char* filename, const char AuxType, double b[]){/****************************************************************************//*  This function opens and reads the specified file, placing auxillary     *//*  vector(s) of the given type (if available) in b.                        *//*  Return value is the number of vectors successfully read.                *//*                                                                          *//*                AuxType = 'F'   full right-hand-side vector(s)            *//*                AuxType = 'G'   initial Guess vector(s)                   *//*                AuxType = 'X'   eXact solution vector(s)                  *//*                                                                          *//*    ----------                                                            *//*    **CAVEAT**                                                            *//*    ----------                                                            *//*  Parsing real formats from Fortran is tricky, and this file reader       *//*  does not claim to be foolproof.   It has been tested for cases when     *//*  the real values are printed consistently and evenly spaced on each      *//*  line, with Fixed (F), and Exponential (E or D) formats.                 *//*                                                                          *//*  **  If the input file does not adhere to the H/B format, the  **        *//*  **             results will be unpredictable.                 **        *//*                                                                          *//****************************************************************************/    FILE *in_file;    int i,j,n,maxcol,start,stride,col,last,linel;    int Ptrcrd, Indcrd, Valcrd, Rhscrd;    int Nrow, Ncol, Nnzero, Nentries;    int Nrhs, nvecs, rhsi;    int Rhsperline, Rhswidth, Rhsprec;    int Rhsflag;    char *ThisElement;    char Title[73], Key[9], Type[4], Rhstype[4];    char Ptrfmt[17], Indfmt[17], Valfmt[21], Rhsfmt[21];    char line[BUFSIZ];    if ((in_file = fopen( filename, "r")) == NULL) {      fprintf(stderr,"Error: Cannot open file: %s\n",filename);      return 0;     }    readHB_header(in_file, Title, Key, Type, &Nrow, &Ncol, &Nnzero, &Nrhs,                  Ptrfmt, Indfmt, Valfmt, Rhsfmt,                  &Ptrcrd, &Indcrd, &Valcrd, &Rhscrd, Rhstype);    if (Nrhs <= 0)    {      fprintf(stderr, "Warn: Attempt to read auxillary vector(s) when none are present.\n");      return 0;    }    if (Rhstype[0] != 'F' )    {      fprintf(stderr,"Warn: Attempt to read auxillary vector(s) which are not stored in Full form.\n");      fprintf(stderr,"       Rhs must be specified as full. \n");      return 0;    }/* If reading complex data, allow for interleaved real and imaginary values. */     if ( Type[0] == 'C' ) {       Nentries = 2*Nrow;     } else {       Nentries = Nrow;    }    nvecs = 1;        if ( Rhstype[1] == 'G' ) nvecs++;    if ( Rhstype[2] == 'X' ) nvecs++;    if ( AuxType == 'G' && Rhstype[1] != 'G' ) {      fprintf(stderr, "Warn: Attempt to read auxillary Guess vector(s) when none are present.\n");      return 0;    }    if ( AuxType == 'X' && Rhstype[2] != 'X' ) {      fprintf(stderr, "Warn: Attempt to read auxillary eXact solution vector(s) when none are present.\n");      return 0;    }    ParseRfmt(Rhsfmt, &Rhsperline, &Rhswidth, &Rhsprec,&Rhsflag);    maxcol = Rhsperline*Rhswidth;/*  Lines to skip before starting to read RHS values... */    n = Ptrcrd + Indcrd + Valcrd;    for (i = 0; i < n; i++)      fgets(line, BUFSIZ, in_file);/*  start  - number of initial aux vector entries to skip   *//*           to reach first  vector requested               *//*  stride - number of aux vector entries to skip between   *//*           requested vectors                              */    if ( AuxType == 'F' ) start = 0;    else if ( AuxType == 'G' ) start = Nentries;    else start = (nvecs-1)*Nentries;    stride = (nvecs-1)*Nentries;    fgets(line, BUFSIZ, in_file);    linel= strchr(line,'\n')-line;    col = 0;/*  Skip to initial offset */

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