binomial.hpp
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HPP
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// static RealType find_minimum_number_of_trials( RealType k, // number of events RealType p, // success fraction RealType alpha) // risk level { static const char* function = "boost::math::binomial_distribution<%1%>::find_minimum_number_of_trials"; // Error checks: RealType result; if(false == binomial_detail::check_dist_and_k( function, k, p, k, &result, Policy()) && binomial_detail::check_dist_and_prob( function, k, p, alpha, &result, Policy())) { return result; } result = ibetac_invb(k + 1, p, alpha, Policy()); // returns n - k return result + k; } static RealType find_maximum_number_of_trials( RealType k, // number of events RealType p, // success fraction RealType alpha) // risk level { static const char* function = "boost::math::binomial_distribution<%1%>::find_maximum_number_of_trials"; // Error checks: RealType result; if(false == binomial_detail::check_dist_and_k( function, k, p, k, &result, Policy()) && binomial_detail::check_dist_and_prob( function, k, p, alpha, &result, Policy())) { return result; } result = ibeta_invb(k + 1, p, alpha, Policy()); // returns n - k return result + k; } private: RealType m_n; // Not sure if this shouldn't be an int? RealType m_p; // success_fraction }; // template <class RealType, class Policy> class binomial_distribution typedef binomial_distribution<> binomial; // typedef binomial_distribution<double> binomial; // IS now included since no longer a name clash with function binomial. //typedef binomial_distribution<double> binomial; // Reserved name of type double. template <class RealType, class Policy> const std::pair<RealType, RealType> range(const binomial_distribution<RealType, Policy>& dist) { // Range of permissible values for random variable k. using boost::math::tools::max_value; return std::pair<RealType, RealType>(static_cast<RealType>(0), dist.trials()); } template <class RealType, class Policy> const std::pair<RealType, RealType> support(const binomial_distribution<RealType, Policy>& dist) { // Range of supported values for random variable k. // This is range where cdf rises from 0 to 1, and outside it, the pdf is zero. return std::pair<RealType, RealType>(0, dist.trials()); } template <class RealType, class Policy> inline RealType mean(const binomial_distribution<RealType, Policy>& dist) { // Mean of Binomial distribution = np. return dist.trials() * dist.success_fraction(); } // mean template <class RealType, class Policy> inline RealType variance(const binomial_distribution<RealType, Policy>& dist) { // Variance of Binomial distribution = np(1-p). return dist.trials() * dist.success_fraction() * (1 - dist.success_fraction()); } // variance template <class RealType, class Policy> RealType pdf(const binomial_distribution<RealType, Policy>& dist, const RealType& k) { // Probability Density/Mass Function. BOOST_FPU_EXCEPTION_GUARD BOOST_MATH_STD_USING // for ADL of std functions RealType n = dist.trials(); // Error check: RealType result; if(false == binomial_detail::check_dist_and_k( "boost::math::pdf(binomial_distribution<%1%> const&, %1%)", n, dist.success_fraction(), k, &result, Policy())) { return result; } // Special cases of success_fraction, regardless of k successes and regardless of n trials. if (dist.success_fraction() == 0) { // probability of zero successes is 1: return static_cast<RealType>(k == 0 ? 1 : 0); } if (dist.success_fraction() == 1) { // probability of n successes is 1: return static_cast<RealType>(k == n ? 1 : 0); } // k argument may be integral, signed, or unsigned, or floating point. // If necessary, it has already been promoted from an integral type. if (n == 0) { return 1; // Probability = 1 = certainty. } if (k == 0) { // binomial coeffic (n 0) = 1, // n ^ 0 = 1 return pow(1 - dist.success_fraction(), n); } if (k == n) { // binomial coeffic (n n) = 1, // n ^ 0 = 1 return pow(dist.success_fraction(), k); // * pow((1 - dist.success_fraction()), (n - k)) = 1 } // Probability of getting exactly k successes // if C(n, k) is the binomial coefficient then: // // f(k; n,p) = C(n, k) * p^k * (1-p)^(n-k) // = (n!/(k!(n-k)!)) * p^k * (1-p)^(n-k) // = (tgamma(n+1) / (tgamma(k+1)*tgamma(n-k+1))) * p^k * (1-p)^(n-k) // = p^k (1-p)^(n-k) / (beta(k+1, n-k+1) * (n+1)) // = ibeta_derivative(k+1, n-k+1, p) / (n+1) // using boost::math::ibeta_derivative; // a, b, x return ibeta_derivative(k+1, n-k+1, dist.success_fraction(), Policy()) / (n+1); } // pdf template <class RealType, class Policy> inline RealType cdf(const binomial_distribution<RealType, Policy>& dist, const RealType& k) { // Cumulative Distribution Function Binomial. // The random variate k is the number of successes in n trials. // k argument may be integral, signed, or unsigned, or floating point. // If necessary, it has already been promoted from an integral type. // Returns the sum of the terms 0 through k of the Binomial Probability Density/Mass: // // i=k // -- ( n ) i n-i // > | | p (1-p) // -- ( i ) // i=0 // The terms are not summed directly instead // the incomplete beta integral is employed, // according to the formula: // P = I[1-p]( n-k, k+1). // = 1 - I[p](k + 1, n - k) BOOST_MATH_STD_USING // for ADL of std functions RealType n = dist.trials(); RealType p = dist.success_fraction(); // Error check: RealType result; if(false == binomial_detail::check_dist_and_k( "boost::math::cdf(binomial_distribution<%1%> const&, %1%)", n, p, k, &result, Policy())) { return result; } if (k == n) { return 1; } // Special cases, regardless of k. if (p == 0) { // This need explanation: // the pdf is zero for all cases except when k == 0. // For zero p the probability of zero successes is one. // Therefore the cdf is always 1: // the probability of k or *fewer* successes is always 1 // if there are never any successes! return 1; } if (p == 1) { // This is correct but needs explanation: // when k = 1 // all the cdf and pdf values are zero *except* when k == n, // and that case has been handled above already. return 0; } // // P = I[1-p](n - k, k + 1) // = 1 - I[p](k + 1, n - k) // Use of ibetac here prevents cancellation errors in calculating // 1-p if p is very small, perhaps smaller than machine epsilon. // // Note that we do not use a finite sum here, since the incomplete // beta uses a finite sum internally for integer arguments, so // we'll just let it take care of the necessary logic. // return ibetac(k + 1, n - k, p, Policy()); } // binomial cdf template <class RealType, class Policy> inline RealType cdf(const complemented2_type<binomial_distribution<RealType, Policy>, RealType>& c) { // Complemented Cumulative Distribution Function Binomial. // The random variate k is the number of successes in n trials. // k argument may be integral, signed, or unsigned, or floating point. // If necessary, it has already been promoted from an integral type. // Returns the sum of the terms k+1 through n of the Binomial Probability Density/Mass: // // i=n // -- ( n ) i n-i // > | | p (1-p) // -- ( i ) // i=k+1 // The terms are not summed directly instead // the incomplete beta integral is employed, // according to the formula: // Q = 1 -I[1-p]( n-k, k+1). // = I[p](k + 1, n - k) BOOST_MATH_STD_USING // for ADL of std functions RealType const& k = c.param; binomial_distribution<RealType, Policy> const& dist = c.dist; RealType n = dist.trials(); RealType p = dist.success_fraction(); // Error checks: RealType result; if(false == binomial_detail::check_dist_and_k( "boost::math::cdf(binomial_distribution<%1%> const&, %1%)", n, p, k, &result, Policy())) { return result; } if (k == n) { // Probability of greater than n successes is necessarily zero: return 0; } // Special cases, regardless of k. if (p == 0) { // This need explanation: the pdf is zero for all // cases except when k == 0. For zero p the probability // of zero successes is one. Therefore the cdf is always // 1: the probability of *more than* k successes is always 0 // if there are never any successes! return 0; } if (p == 1) { // This needs explanation, when p = 1 // we always have n successes, so the probability // of more than k successes is 1 as long as k < n. // The k == n case has already been handled above. return 1; } // // Calculate cdf binomial using the incomplete beta function. // Q = 1 -I[1-p](n - k, k + 1) // = I[p](k + 1, n - k) // Use of ibeta here prevents cancellation errors in calculating // 1-p if p is very small, perhaps smaller than machine epsilon. // // Note that we do not use a finite sum here, since the incomplete // beta uses a finite sum internally for integer arguments, so // we'll just let it take care of the necessary logic. // return ibeta(k + 1, n - k, p, Policy()); } // binomial cdf template <class RealType, class Policy> inline RealType quantile(const binomial_distribution<RealType, Policy>& dist, const RealType& p) { return binomial_detail::quantile_imp(dist, p, 1-p); } // quantile template <class RealType, class Policy> RealType quantile(const complemented2_type<binomial_distribution<RealType, Policy>, RealType>& c) { return binomial_detail::quantile_imp(c.dist, 1-c.param, c.param); } // quantile template <class RealType, class Policy> inline RealType mode(const binomial_distribution<RealType, Policy>& dist) { BOOST_MATH_STD_USING // ADL of std functions. RealType p = dist.success_fraction(); RealType n = dist.trials(); return floor(p * (n + 1)); } template <class RealType, class Policy> inline RealType median(const binomial_distribution<RealType, Policy>& dist) { // Bounds for the median of the negative binomial distribution // VAN DE VEN R. ; WEBER N. C. ; // Univ. Sydney, school mathematics statistics, Sydney N.S.W. 2006, AUSTRALIE // Metrika (Metrika) ISSN 0026-1335 CODEN MTRKA8 // 1993, vol. 40, no3-4, pp. 185-189 (4 ref.) // Bounds for median and 50 percetage point of binomial and negative binomial distribution // Metrika, ISSN 0026-1335 (Print) 1435-926X (Online) // Volume 41, Number 1 / December, 1994, DOI 10.1007/BF01895303 BOOST_MATH_STD_USING // ADL of std functions. RealType p = dist.success_fraction(); RealType n = dist.trials(); // Wikipedia says one of floor(np) -1, floor (np), floor(np) +1 return floor(p * n); // Chose the middle value. } template <class RealType, class Policy> inline RealType skewness(const binomial_distribution<RealType, Policy>& dist) { BOOST_MATH_STD_USING // ADL of std functions. RealType p = dist.success_fraction(); RealType n = dist.trials(); return (1 - 2 * p) / sqrt(n * p * (1 - p)); } template <class RealType, class Policy> inline RealType kurtosis(const binomial_distribution<RealType, Policy>& dist) { RealType p = dist.success_fraction(); RealType n = dist.trials(); return 3 - 6 / n + 1 / (n * p * (1 - p)); } template <class RealType, class Policy> inline RealType kurtosis_excess(const binomial_distribution<RealType, Policy>& dist) { RealType p = dist.success_fraction(); RealType q = 1 - p; RealType n = dist.trials(); return (1 - 6 * p * q) / (n * p * q); } } // namespace math } // namespace boost// This include must be at the end, *after* the accessors// for this distribution have been defined, in order to// keep compilers that support two-phase lookup happy.#include <boost/math/distributions/detail/derived_accessors.hpp>#endif // BOOST_MATH_SPECIAL_BINOMIAL_HPP
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