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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd"><!--NewPage--><HTML><HEAD><!-- Generated by javadoc (build 1.5.0_13) on Tue Jul 15 15:48:36 NZST 2008 --><TITLE>Prior</TITLE><META NAME="keywords" CONTENT="weka.classifiers.bayes.blr.Prior class"><LINK REL ="stylesheet" TYPE="text/css" HREF="../../../../stylesheet.css" TITLE="Style"><SCRIPT type="text/javascript">function windowTitle(){    parent.document.title="Prior";}</SCRIPT><NOSCRIPT></NOSCRIPT></HEAD><BODY BGCOLOR="white" onload="windowTitle();"><!-- ========= START OF TOP NAVBAR ======= --><A NAME="navbar_top"><!-- --></A><A HREF="#skip-navbar_top" title="Skip navigation links"></A><TABLE BORDER="0" WIDTH="100%" CELLPADDING="1" CELLSPACING="0" SUMMARY=""><TR><TD COLSPAN=2 BGCOLOR="#EEEEFF" CLASS="NavBarCell1"><A NAME="navbar_top_firstrow"><!-- --></A><TABLE BORDER="0" CELLPADDING="0" CELLSPACING="3" SUMMARY="">  <TR ALIGN="center" VALIGN="top">  <TD BGCOLOR="#EEEEFF" 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VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2">  SUMMARY:&nbsp;NESTED&nbsp;|&nbsp;FIELD&nbsp;|&nbsp;<A HREF="#constructor_summary">CONSTR</A>&nbsp;|&nbsp;<A HREF="#method_summary">METHOD</A></FONT></TD><TD VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2">DETAIL:&nbsp;FIELD&nbsp;|&nbsp;<A HREF="#constructor_detail">CONSTR</A>&nbsp;|&nbsp;<A HREF="#method_detail">METHOD</A></FONT></TD></TR></TABLE><A NAME="skip-navbar_top"></A><!-- ========= END OF TOP NAVBAR ========= --><HR><!-- ======== START OF CLASS DATA ======== --><H2><FONT SIZE="-1">weka.classifiers.bayes.blr</FONT><BR>Class Prior</H2><PRE>java.lang.Object  <IMG SRC="../../../../resources/inherit.gif" ALT="extended by "><B>weka.classifiers.bayes.blr.Prior</B></PRE><DL><DT><B>All Implemented Interfaces:</B> <DD>java.io.Serializable, <A HREF="../../../../weka/core/RevisionHandler.html" title="interface in weka.core">RevisionHandler</A></DD></DL><DL><DT><B>Direct Known Subclasses:</B> <DD><A HREF="../../../../weka/classifiers/bayes/blr/GaussianPriorImpl.html" title="class in weka.classifiers.bayes.blr">GaussianPriorImpl</A>, <A HREF="../../../../weka/classifiers/bayes/blr/LaplacePriorImpl.html" title="class in weka.classifiers.bayes.blr">LaplacePriorImpl</A></DD></DL><HR><DL><DT><PRE>public abstract class <B>Prior</B><DT>extends java.lang.Object<DT>implements java.io.Serializable, <A HREF="../../../../weka/core/RevisionHandler.html" title="interface in weka.core">RevisionHandler</A></DL></PRE><P>This is an interface to plug various priors into the Bayesian Logistic Regression Model.<P><P><DL><DT><B>Version:</B></DT>  <DD>$Revision: 1.2 $</DD><DT><B>Author:</B></DT>  <DD>Navendu Garg (gargnav@iit.edu)</DD><DT><B>See Also:</B><DD><A HREF="../../../../serialized-form.html#weka.classifiers.bayes.blr.Prior">Serialized Form</A></DL><HR><P><!-- ======== CONSTRUCTOR SUMMARY ======== --><A NAME="constructor_summary"><!-- --></A><TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY=""><TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor"><TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2"><B>Constructor Summary</B></FONT></TH></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD><CODE><B><A HREF="../../../../weka/classifiers/bayes/blr/Prior.html#Prior()">Prior</A></B>()</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD></TR></TABLE>&nbsp;<!-- ========== METHOD SUMMARY =========== --><A NAME="method_summary"><!-- --></A><TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY=""><TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor"><TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2"><B>Method Summary</B></FONT></TH></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>&nbsp;void</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/bayes/blr/Prior.html#computelogLikelihood(double[], weka.core.Instances)">computelogLikelihood</A></B>(double[]&nbsp;betas,                     <A HREF="../../../../weka/core/Instances.html" title="class in weka.core">Instances</A>&nbsp;instances)</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Function computes the log-likelihood value: -sum{1 to n}{ln(1+exp(-Beta*x(i)*y(i))}</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>&nbsp;void</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/bayes/blr/Prior.html#computePenalty(double[], double[])">computePenalty</A></B>(double[]&nbsp;betas,               double[]&nbsp;hyperparameters)</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Skeleton function to compute penalty terms.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>&nbsp;double</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/bayes/blr/Prior.html#getLoglikelihood()">getLoglikelihood</A></B>()</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>&nbsp;double</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/bayes/blr/Prior.html#getLogPosterior()">getLogPosterior</A></B>()</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>&nbsp;double</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/bayes/blr/Prior.html#getPenalty()">getPenalty</A></B>()</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE>&nbsp;double</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/bayes/blr/Prior.html#update(int, weka.core.Instances, double, double, double[], double)">update</A></B>(int&nbsp;j,       <A HREF="../../../../weka/core/Instances.html" title="class in weka.core">Instances</A>&nbsp;instances,       double&nbsp;beta,       double&nbsp;hyperparameter,       double[]&nbsp;r,       double&nbsp;deltaV)</CODE><BR>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;Interface for the update functions for different types of priors.</TD></TR></TABLE>&nbsp;<A NAME="methods_inherited_from_class_java.lang.Object"><!-- --></A><TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY=""><TR BGCOLOR="#EEEEFF" CLASS="TableSubHeadingColor"><TH ALIGN="left"><B>Methods inherited from class java.lang.Object</B></TH></TR>

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