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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd"><!--NewPage--><HTML><HEAD><!-- Generated by javadoc (build 1.5.0_13) on Tue Jul 15 15:48:42 NZST 2008 --><TITLE>LogisticBase</TITLE><META NAME="keywords" CONTENT="weka.classifiers.trees.lmt.LogisticBase class"><LINK REL ="stylesheet" TYPE="text/css" HREF="../../../../stylesheet.css" TITLE="Style"><SCRIPT type="text/javascript">function windowTitle(){ parent.document.title="LogisticBase";}</SCRIPT><NOSCRIPT></NOSCRIPT></HEAD><BODY BGCOLOR="white" onload="windowTitle();"><!-- ========= START OF TOP NAVBAR ======= --><A NAME="navbar_top"><!-- --></A><A HREF="#skip-navbar_top" title="Skip navigation links"></A><TABLE BORDER="0" WIDTH="100%" CELLPADDING="1" CELLSPACING="0" SUMMARY=""><TR><TD COLSPAN=2 BGCOLOR="#EEEEFF" CLASS="NavBarCell1"><A NAME="navbar_top_firstrow"><!-- --></A><TABLE BORDER="0" CELLPADDING="0" CELLSPACING="3" SUMMARY=""> <TR ALIGN="center" VALIGN="top"> <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1"> <A HREF="../../../../overview-summary.html"><FONT CLASS="NavBarFont1"><B>Overview</B></FONT></A> </TD> <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1"> <A HREF="package-summary.html"><FONT CLASS="NavBarFont1"><B>Package</B></FONT></A> </TD> <TD BGCOLOR="#FFFFFF" CLASS="NavBarCell1Rev"> <FONT CLASS="NavBarFont1Rev"><B>Class</B></FONT> </TD> <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1"> <A HREF="package-tree.html"><FONT CLASS="NavBarFont1"><B>Tree</B></FONT></A> </TD> <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1"> <A HREF="../../../../deprecated-list.html"><FONT CLASS="NavBarFont1"><B>Deprecated</B></FONT></A> </TD> <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1"> <A HREF="../../../../index-all.html"><FONT CLASS="NavBarFont1"><B>Index</B></FONT></A> </TD> <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1"> <A HREF="../../../../help-doc.html"><FONT CLASS="NavBarFont1"><B>Help</B></FONT></A> </TD> <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1"> <A HREF="http://www.cs.waikato.ac.nz/ml/weka/" target="_blank"><FONT CLASS="NavBarFont1"><B>Weka's home</B></FONT></A> </TD> </TR></TABLE></TD><TD ALIGN="right" VALIGN="top" ROWSPAN=3><EM></EM></TD></TR><TR><TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2"> <A HREF="../../../../weka/classifiers/trees/lmt/LMTNode.html" title="class in weka.classifiers.trees.lmt"><B>PREV CLASS</B></A> <A HREF="../../../../weka/classifiers/trees/lmt/ResidualModelSelection.html" title="class in weka.classifiers.trees.lmt"><B>NEXT CLASS</B></A></FONT></TD><TD BGCOLOR="white" CLASS="NavBarCell2"><FONT SIZE="-2"> <A HREF="../../../../index.html?weka/classifiers/trees/lmt/LogisticBase.html" target="_top"><B>FRAMES</B></A> <A HREF="LogisticBase.html" target="_top"><B>NO FRAMES</B></A> <SCRIPT type="text/javascript"> <!-- if(window==top) { document.writeln('<A HREF="../../../../allclasses-noframe.html"><B>All Classes</B></A>'); } //--></SCRIPT><NOSCRIPT> <A HREF="../../../../allclasses-noframe.html"><B>All Classes</B></A></NOSCRIPT></FONT></TD></TR><TR><TD VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2"> SUMMARY: NESTED | FIELD | <A HREF="#constructor_summary">CONSTR</A> | <A HREF="#method_summary">METHOD</A></FONT></TD><TD VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2">DETAIL: FIELD | <A HREF="#constructor_detail">CONSTR</A> | <A HREF="#method_detail">METHOD</A></FONT></TD></TR></TABLE><A NAME="skip-navbar_top"></A><!-- ========= END OF TOP NAVBAR ========= --><HR><!-- ======== START OF CLASS DATA ======== --><H2><FONT SIZE="-1">weka.classifiers.trees.lmt</FONT><BR>Class LogisticBase</H2><PRE>java.lang.Object <IMG SRC="../../../../resources/inherit.gif" ALT="extended by "><A HREF="../../../../weka/classifiers/Classifier.html" title="class in weka.classifiers">weka.classifiers.Classifier</A> <IMG SRC="../../../../resources/inherit.gif" ALT="extended by "><B>weka.classifiers.trees.lmt.LogisticBase</B></PRE><DL><DT><B>All Implemented Interfaces:</B> <DD>java.io.Serializable, java.lang.Cloneable, <A HREF="../../../../weka/core/CapabilitiesHandler.html" title="interface in weka.core">CapabilitiesHandler</A>, <A HREF="../../../../weka/core/OptionHandler.html" title="interface in weka.core">OptionHandler</A>, <A HREF="../../../../weka/core/RevisionHandler.html" title="interface in weka.core">RevisionHandler</A>, <A HREF="../../../../weka/core/WeightedInstancesHandler.html" title="interface in weka.core">WeightedInstancesHandler</A></DD></DL><DL><DT><B>Direct Known Subclasses:</B> <DD><A HREF="../../../../weka/classifiers/trees/ft/FTtree.html" title="class in weka.classifiers.trees.ft">FTtree</A>, <A HREF="../../../../weka/classifiers/trees/lmt/LMTNode.html" title="class in weka.classifiers.trees.lmt">LMTNode</A></DD></DL><HR><DL><DT><PRE>public class <B>LogisticBase</B><DT>extends <A HREF="../../../../weka/classifiers/Classifier.html" title="class in weka.classifiers">Classifier</A><DT>implements <A HREF="../../../../weka/core/WeightedInstancesHandler.html" title="interface in weka.core">WeightedInstancesHandler</A></DL></PRE><P>Base/helper class for building logistic regression models with the LogitBoost algorithm. Used for building logistic model trees (weka.classifiers.trees.lmt.LMT) and standalone logistic regression (weka.classifiers.functions.SimpleLogistic). <!-- options-start --> Valid options are: <p/> <pre> -D If set, classifier is run in debug mode and may output additional info to the console</pre> <!-- options-end --><P><P><DL><DT><B>Version:</B></DT> <DD>$Revision: 1.9 $</DD><DT><B>Author:</B></DT> <DD>Niels Landwehr, Marc Sumner</DD><DT><B>See Also:</B><DD><A HREF="../../../../serialized-form.html#weka.classifiers.trees.lmt.LogisticBase">Serialized Form</A></DL><HR><P><!-- ======== CONSTRUCTOR SUMMARY ======== --><A NAME="constructor_summary"><!-- --></A><TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY=""><TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor"><TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2"><B>Constructor Summary</B></FONT></TH></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#LogisticBase()">LogisticBase</A></B>()</CODE><BR> Constructor that creates LogisticBase object with standard options.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#LogisticBase(int, boolean, boolean)">LogisticBase</A></B>(int numBoostingIterations, boolean useCrossValidation, boolean errorOnProbabilities)</CODE><BR> Constructor to create LogisticBase object.</TD></TR></TABLE> <!-- ========== METHOD SUMMARY =========== --><A NAME="method_summary"><!-- --></A><TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY=""><TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor"><TH ALIGN="left" COLSPAN="2"><FONT SIZE="+2"><B>Method Summary</B></FONT></TH></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> void</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#buildClassifier(weka.core.Instances)">buildClassifier</A></B>(<A HREF="../../../../weka/core/Instances.html" title="class in weka.core">Instances</A> data)</CODE><BR> Builds the logistic regression model usiing LogitBoost.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> void</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#cleanup()">cleanup</A></B>()</CODE><BR> Cleanup in order to save memory.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> double[]</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#distributionForInstance(weka.core.Instance)">distributionForInstance</A></B>(<A HREF="../../../../weka/core/Instance.html" title="class in weka.core">Instance</A> instance)</CODE><BR> Returns class probabilities for an instance.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> int</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#getMaxIterations()">getMaxIterations</A></B>()</CODE><BR> Returns the maxIterations parameter.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> int</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#getNumRegressions()">getNumRegressions</A></B>()</CODE><BR> The number of LogitBoost iterations performed (= the number of simple regression functions fit).</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> java.lang.String</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#getRevision()">getRevision</A></B>()</CODE><BR> Returns the revision string.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> boolean</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#getUseAIC()">getUseAIC</A></B>()</CODE><BR> Get the value of useAIC.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> int[][]</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#getUsedAttributes()">getUsedAttributes</A></B>()</CODE><BR> Returns an array of the indices of the attributes used in the logistic model.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> double</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#getWeightTrimBeta()">getWeightTrimBeta</A></B>()</CODE><BR> Get the value of weightTrimBeta.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> double</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#percentAttributesUsed()">percentAttributesUsed</A></B>()</CODE><BR> Returns the fraction of all attributes in the data that are used in the logistic model (in percent).</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> void</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#setHeuristicStop(int)">setHeuristicStop</A></B>(int heuristicStop)</CODE><BR> Sets the option "heuristicStop".</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> void</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#setMaxIterations(int)">setMaxIterations</A></B>(int maxIterations)</CODE><BR> Sets the parameter "maxIterations".</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> void</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#setUseAIC(boolean)">setUseAIC</A></B>(boolean c)</CODE><BR> Set the value of useAIC.</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> void</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#setWeightTrimBeta(double)">setWeightTrimBeta</A></B>(double w)</CODE><BR> Sets the option "weightTrimBeta".</TD></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1"><CODE> java.lang.String</CODE></FONT></TD><TD><CODE><B><A HREF="../../../../weka/classifiers/trees/lmt/LogisticBase.html#toString()">toString</A></B>()</CODE><BR> Returns a description of the logistic model (i.e., attributes and coefficients).</TD></TR></TABLE> <A NAME="methods_inherited_from_class_weka.classifiers.Classifier"><!-- --></A><TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY=""><TR BGCOLOR="#EEEEFF" CLASS="TableSubHeadingColor"><TH ALIGN="left"><B>Methods inherited from class weka.classifiers.<A HREF="../../../../weka/classifiers/Classifier.html" title="class in weka.classifiers">Classifier</A></B></TH></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD><CODE><A HREF="../../../../weka/classifiers/Classifier.html#classifyInstance(weka.core.Instance)">classifyInstance</A>, <A HREF="../../../../weka/classifiers/Classifier.html#debugTipText()">debugTipText</A>, <A HREF="../../../../weka/classifiers/Classifier.html#forName(java.lang.String, java.lang.String[])">forName</A>, <A HREF="../../../../weka/classifiers/Classifier.html#getCapabilities()">getCapabilities</A>, <A HREF="../../../../weka/classifiers/Classifier.html#getDebug()">getDebug</A>, <A HREF="../../../../weka/classifiers/Classifier.html#getOptions()">getOptions</A>, <A HREF="../../../../weka/classifiers/Classifier.html#listOptions()">listOptions</A>, <A HREF="../../../../weka/classifiers/Classifier.html#makeCopies(weka.classifiers.Classifier, int)">makeCopies</A>, <A HREF="../../../../weka/classifiers/Classifier.html#makeCopy(weka.classifiers.Classifier)">makeCopy</A>, <A HREF="../../../../weka/classifiers/Classifier.html#setDebug(boolean)">setDebug</A>, <A HREF="../../../../weka/classifiers/Classifier.html#setOptions(java.lang.String[])">setOptions</A></CODE></TD></TR></TABLE> <A NAME="methods_inherited_from_class_java.lang.Object"><!-- --></A><TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY=""><TR BGCOLOR="#EEEEFF" CLASS="TableSubHeadingColor"><TH ALIGN="left"><B>Methods inherited from class java.lang.Object</B></TH></TR><TR BGCOLOR="white" CLASS="TableRowColor"><TD><CODE>equals, getClass, hashCode, notify, notifyAll, wait, wait, wait</CODE></TD></TR></TABLE> <P><!-- ========= CONSTRUCTOR DETAIL ======== --><A NAME="constructor_detail"><!-- --></A><TABLE BORDER="1" WIDTH="100%" CELLPADDING="3" CELLSPACING="0" SUMMARY=""><TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor"><TH ALIGN="left" COLSPAN="1"><FONT SIZE="+2"><B>Constructor Detail</B></FONT></TH></TR></TABLE><A NAME="LogisticBase()"><!-- --></A><H3>LogisticBase</H3><PRE>public <B>LogisticBase</B>()</PRE><DL><DD>Constructor that creates LogisticBase object with standard options.<P></DL><HR><A NAME="LogisticBase(int, boolean, boolean)"><!-- --></A><H3>LogisticBase</H3><PRE>public <B>LogisticBase</B>(int numBoostingIterations, boolean useCrossValidation, boolean errorOnProbabilities)</PRE><DL><DD>Constructor to create LogisticBase object.<P><DL><DT><B>Parameters:</B><DD><CODE>numBoostingIterations</CODE> - fixed number of iterations for LogitBoost (if negative, use cross-validation or
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