write_blocks_hdf5_r8.c

做网格的好程序

		  (udim[1] * udim[0] * it[2]) +
		  (udim[0] * it[1]) +
		  it[0]];
	    *off = *off + 1;
	  }
	  
	} /* end ivar loop */
      } /* end i loop */
    } /* end j loop */
  } /* end k loop */ 
  
}

void WRITE_Blocks_hdf5_r8(hid_t* file_id, 
			 hid_t* dset_block, 
			 hid_t* block_type_id, 
			 int* max_lnblocks, 
			 int* n_to_left, 
			 int* lnblocks, 
			 int* mdim,
			 int* ndim,
			 int* ngid,
			 int* mflags,
			 int lrefine[], 
			 int nodetype[], 
			 int which_child[], 
			 int gid[], 
			 int bflags[],
			 float coord[],
			 float bnd_box[],
			 float work_block[],
			 float unk[],
			 int*  nvar,
			 int*  nvar_chk_cc,
			 int   checkp_on_cc[],
			 float facevarx[], float facevary[], float facevarz[],
			 int*  nbndvar,
			 int*  nvar_chk_fc,
			 int   checkp_on_fc[],
			 float unk_e_x[], float unk_e_y[], float unk_e_z[],
			 int*  nbndvare,
			 int*  nvar_chk_ec,
			 int   checkp_on_ec[],
			 float unk_n[],
			 int*  nbndvarc,
			 int*  nvar_chk_nc,
			 int   checkp_on_nc[],
			 int*  nx,  int* ny, int* nz,
			 int*  il0, int* iu0,
			 int*  jl0, int* ju0,
			 int*  kl0, int* ku0,
			 int   iorder[])
{
  hid_t  memspace, filespace;
  hsize_t  count[1];
  hssize_t offset[1];
  hid_t plist_id;
  int ivar, i, j, k, lb, i2, j2, k2, nx2, ny2, ivar2;
  int istart, iend, jstart, jend, kstart, kend;
  herr_t status;
  int k2d, k3d;
  int off, size_block_type;

  float * block_pointer;

  k2d = 0;
  if (*ndim >= 2) k2d = 1;
  k3d = 0;
  if (*ndim == 3) k3d = 1;

  size_block_type = (sizeof(float)*3) + 
    (sizeof(float) * *ngid) * + (sizeof(float) * *mflags) +
    (sizeof(float) * *mdim) + (sizeof(float) * 2 * *mdim) +
    (sizeof(float)) + 
    (sizeof(float) * *nvar_chk_cc * (*iu0-*il0) * (*ju0-*jl0) * (*ku0-*kl0)) +
    (sizeof(float) * *nvar_chk_fc * (*iu0-*il0+1) * (*ju0-*jl0) * (*ku0-*kl0)) +
    (sizeof(float) * *nvar_chk_fc * (*iu0-*il0) * (*ju0-*jl0+k2d) * (*ku0-*kl0)) +
    (sizeof(float) * *nvar_chk_fc * (*iu0-*il0) * (*ju0-*jl0) * (*ku0-*kl0+k3d)) +
    (sizeof(float) * *nvar_chk_ec * (*iu0-*il0) * (*ju0-*jl0+k2d) * (*ku0-*kl0+k3d)) +
    (sizeof(float) * *nvar_chk_ec * (*iu0-*il0+1) * (*ju0-*jl0) * (*ku0-*kl0+k3d)) +
    (sizeof(float) * *nvar_chk_ec * (*iu0-*il0+1) * (*ju0-*jl0+k2d) * (*ku0-*kl0)) +
    (sizeof(float) * *nvar_chk_nc * (*iu0-*il0+1) * (*ju0-*jl0+k2d) * (*ku0-*kl0+k3d));

  block_pointer = (float *) malloc(size_block_type);
  
  /* Create property list for collective dataset write */
  plist_id = H5Pcreate(H5P_DATASET_XFER);
  /*H5Pset_dxpl_mpio(plist_id, H5FD_MPIO_COLLECTIVE);*/
  H5Pset_dxpl_mpio(plist_id, H5FD_MPIO_INDEPENDENT);

  nx2 = *iu0 - *il0;
  ny2 = *ju0 - *jl0;
  kstart = *kl0;
  kend   = *ku0;
  jstart = *jl0;
  jend   = *ju0;
  istart = *il0;
  iend   = *iu0;
  if (*ndim < 3) {
    kstart = 0;
    kend   = 1;
  }
  if (*ndim < 2) {
    kstart = 0;
    kend   = 1;
    jstart = 0;
    jend   = 1;
  }
  
  for (lb = 0; lb < *max_lnblocks; lb++) {

    if (lb < *lnblocks) {
      off = 0;
      *block_pointer = (float)lrefine[lb];
      off = off + 1;
      *(block_pointer+off) = (float)nodetype[lb];
      off = off + 1;
      *(block_pointer+off) = (float)which_child[lb];
      off = off + 1; 
      for (i = 0; i < *ngid; i++) {
	*(block_pointer+off) = (float)gid[(*ngid * lb) + i];
	off = off + 1; 
      }
      for (i = 0; i < *mflags; i++) {
	*(block_pointer+off) = (float)bflags[(*mflags * lb) + i];
	off = off + 1;
      }
      for (i = 0; i < *mdim; i++) {
	*(block_pointer+off) = coord[(*mdim * lb) + i];
	off = off + 1;
      }
      for (i = 0; i < 2 * *mdim; i++) {
	*(block_pointer+off) = bnd_box[(2 * *mdim * lb) + i];
	off = off + 1;
      }
      *(block_pointer+off) = work_block[lb];
      off = off + 1;

      /* unk data */

      if (*nvar_chk_cc > 0) {

	block_pointer_to_var(unk, iorder, *nvar, *nx, *ny, *nz,
			     kstart, kend,
			     jstart, jend,
			     istart, iend,
			     checkp_on_cc, 0, 0, lb,
			     &off, block_pointer);
  
      } /* end if (nvar_chk_cc */

      /* facevarx data */

      if (*nvar_chk_fc > 0) {

	block_pointer_to_var(facevarx, iorder, *nbndvar, *nx+1, *ny, *nz,
			     kstart, kend,
			     jstart, jend,
			     istart, iend+1,
			     checkp_on_fc, 2, 0, lb,
			     &off, block_pointer);
  
      /* facevary data */

	block_pointer_to_var(facevary, iorder, *nbndvar, *nx, *ny+k2d, *nz,
			     kstart, kend,
			     jstart, jend+k2d,
			     istart, iend,
			     checkp_on_fc, 2, 1, lb,
			     &off, block_pointer);

      /* facevarz data */

	block_pointer_to_var(facevarz, iorder, *nbndvar, *nx, *ny, *nz+k3d,
			     kstart, kend+k3d,
			     jstart, jend,
			     istart, iend,
			     checkp_on_fc, 2, 2, lb,
			     &off, block_pointer);

      } /* end if (nvar_chk_fc */

      /* unk_e_x data */

      if (*nvar_chk_ec > 0) {

	block_pointer_to_var(unk_e_x, iorder, *nbndvare, *nx, *ny+k2d, *nz+k3d,
			     kstart, kend+k3d,
			     jstart, jend+k2d,
			     istart, iend,
			     checkp_on_ec, 2, 0, lb,
			     &off, block_pointer);

      /* unk_e_y data */

	block_pointer_to_var(unk_e_y, iorder, *nbndvare, *nx+1, *ny, *nz+k3d,
			     kstart, kend+k3d,
			     jstart, jend,
			     istart, iend+1,
			     checkp_on_ec, 2, 1, lb,
			     &off, block_pointer);

      /* unk_e_z data */

	block_pointer_to_var(unk_e_z, iorder, *nbndvare, *nx+1, *ny+k2d, *nz,
			     kstart, kend,
			     jstart, jend+k2d,
			     istart, iend+1,
			     checkp_on_ec, 2, 2, lb,
			     &off, block_pointer);

      } /* end if (nvar_chk_ec */

      /* unk_n data */

      if (*nvar_chk_nc > 0) {

	block_pointer_to_var(unk_n, iorder, *nbndvarc, *nx+1, *ny+k2d, *nz+k3d,
			     kstart, kend+k3d,
			     jstart, jend+k2d,
			     istart, iend+1,
			     checkp_on_nc, 0, 0, lb,
			     &off, block_pointer);

      } /* end if (nvar_chk_nc */

      count[0] = 1;
      memspace = H5Screate_simple(1, count, NULL);
  
      offset[0] = *n_to_left + lb; 
      filespace = H5Dget_space(*dset_block);
      H5Sselect_hyperslab(filespace, H5S_SELECT_SET, offset, 
                          NULL, count, NULL);

    } else {

      int lb2;

      lb2 = *lnblocks - 1;

      count[0] = 1;
      memspace = H5Screate_simple(1, count, NULL);
  
      offset[0] = *n_to_left + lb2; 
      filespace = H5Dget_space(*dset_block);
      H5Sselect_hyperslab(filespace, H5S_SELECT_SET, offset, 
                          NULL, count, NULL);

    }
    
    status = H5Dwrite(*dset_block, *block_type_id, memspace, filespace, 
                      plist_id, block_pointer);

    H5Sclose(filespace);
    H5Sclose(memspace);
    
  }

  H5Pclose(plist_id);

  free(block_pointer);

}

#ifdef UNDERSCORE
void write_blocks_hdf5_r8_ (char* file_name_in, 
#endif
#ifdef DOUBLE_UNDERSCORE
void write_blocks_hdf5_r8__ (char* file_name_in, 
#endif
#ifndef UNDERSCORE 
#ifndef DOUBLE_UNDERSCORE
void write_blocks_hdf5_r8 (char* file_name_in, 
#endif
#endif
			   int*  tot_blocks,
			   int*  tot_blocks_wr,
			   int*  max_lnblocks,
			   int*  lnblocks,
			   int*  n_to_left,
			   int*  mdim,
			   int*  ndim,
			   int*  ngid,
			   int*  mflags,
			   int   lrefine[], 
			   int   nodetype[], 
			   int   which_child[], 
			   int   gid[], 
			   int   bflags[],
			   float coord[],
			   float bnd_box[],
			   float work_block[],
			   float unk[],
			   int*  nvar,
			   int*  nvar_chk_cc,
			   int   checkp_on_cc[],
			   float facevarx[], float facevary[], float facevarz[],
			   int*  nbndvar,
			   int*  nvar_chk_fc,
			   int   checkp_on_fc[],
			   float unk_e_x[], float unk_e_y[], float unk_e_z[],
			   int*  nbndvare,
			   int*  nvar_chk_ec,
			   int   checkp_on_ec[],
			   float unk_n[],
			   int*  nbndvarc,
			   int*  nvar_chk_nc,
			   int   checkp_on_nc[],
			   int*  nx,  int* ny, int* nz,
			   int*  il0, int* iu0,
			   int*  jl0, int* ju0, 
			   int*  kl0, int* ku0,
			   float* user_attr_1,
			   float* user_attr_2,
			   float* user_attr_3,
			   float* user_attr_4,
			   float* user_attr_5,
                           int iorder[])
{
  hid_t  file_id, dset_block;  /* file and dataset ids */
  hid_t  block_type_id;

  CREATE_File_hdf5_r8(file_name_in, &file_id);

  WRITE_Header_hdf5_r8(&file_id, tot_blocks,
		       user_attr_1,
		       user_attr_2,
		       user_attr_3,
		       user_attr_4,
		       user_attr_5
		       );

  CREATE_Block_data_type_hdf5_r8(&block_type_id, 
				 mdim, 
				 ndim, 
				 ngid, 
				 mflags,
				 nvar_chk_cc, 
				 nvar_chk_fc, 
				 nvar_chk_ec, 
				 nvar_chk_nc, 
				 il0, iu0, 
				 jl0, ju0, 
				 kl0, ku0); 

  CREATE_Block_data_set_hdf5_r8(&dset_block, 
				&file_id, 
				&block_type_id, 
				tot_blocks_wr);
  
  WRITE_Blocks_hdf5_r8(&file_id, 
		       &dset_block, 
		       &block_type_id, 
		       max_lnblocks, 
		       n_to_left, 
		       lnblocks, 
		       mdim, 
		       ndim, 
		       ngid, 
		       mflags, 
		       lrefine, 
		       nodetype, 
		       which_child, 
		       gid, 
		       bflags, 
		       coord, 
		       bnd_box, 
		       work_block, 
		       unk,
		       nvar, 
		       nvar_chk_cc,
		       checkp_on_cc,
		       facevarx, facevary, facevarz,
		       nbndvar, 
		       nvar_chk_fc,
		       checkp_on_fc,
		       unk_e_x, unk_e_y, unk_e_z,
		       nbndvare, 
		       nvar_chk_ec,
		       checkp_on_ec,
		       unk_n,
		       nbndvarc, 
		       nvar_chk_nc,
		       checkp_on_nc,
		       nx, ny, nz,
		       il0, iu0, jl0, ju0, kl0, ku0,
		       iorder);
  
  /* Close resources */
  H5Dclose(dset_block);
  H5Fclose(file_id);
  H5Tclose(block_type_id);

}