brainweb.experiment.sh

DTMK软件开发包,此为开源软件,是一款很好的医学图像开发资源.

#!/bin/bash
echo /share/bin-linux/insight/bin/KdTreeBasedKmeansBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.0.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.0.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.1ext.dat --bucket-size 100 --result BrainWeb.Kmeans.0pn.1ext.dat

/share/bin-linux/insight/bin/KdTreeBasedKmeansBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.0.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.0.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.1ext.dat --bucket-size 100 --result BrainWeb.Kmeans.0pn.1ext.dat

echo /share/bin-linux/insight/bin/ExpectationMaximizationBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.0.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.0.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.1ext.dat --result BrainWeb.EM.0pn.1ext.dat

/share/bin-linux/insight/bin/ExpectationMaximizationBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.0.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.0.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.1ext.dat --result BrainWeb.EM.0pn.1ext.dat

echo /share/bin-linux/insight/bin/KdTreeBasedKmeansBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.0.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.0.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.2ext.dat --bucket-size 100 --result BrainWeb.Kmeans.0pn.2ext.dat

/share/bin-linux/insight/bin/KdTreeBasedKmeansBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.0.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.0.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.2ext.dat --bucket-size 100 --result BrainWeb.Kmeans.0pn.2ext.dat

echo /share/bin-linux/insight/bin/ExpectationMaximizationBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.0.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.0.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.2ext.dat --result BrainWeb.EM.0pn.2ext.dat

/share/bin-linux/insight/bin/ExpectationMaximizationBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.0.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.0.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.2ext.dat --result BrainWeb.EM.0pn.2ext.dat

echo /share/bin-linux/insight/bin/KdTreeBasedKmeansBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.3.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.3.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.1ext.dat --bucket-size 100 --result BrainWeb.Kmeans.3pn.1ext.dat

/share/bin-linux/insight/bin/KdTreeBasedKmeansBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.3.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.3.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.1ext.dat --bucket-size 100 --result BrainWeb.Kmeans.3pn.1ext.dat

echo /share/bin-linux/insight/bin/ExpectationMaximizationBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.3.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.3.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.1ext.dat --result BrainWeb.EM.3pn.1ext.dat

/share/bin-linux/insight/bin/ExpectationMaximizationBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.3.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.3.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.1ext.dat --result BrainWeb.EM.3pn.1ext.dat

echo /share/bin-linux/insight/bin/KdTreeBasedKmeansBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.9.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.9.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.1ext.dat --bucket-size 100 --result BrainWeb.Kmeans.9pn.1ext.dat

/share/bin-linux/insight/bin/KdTreeBasedKmeansBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.9.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.9.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.1ext.dat --bucket-size 100 --result BrainWeb.Kmeans.9pn.1ext.dat

echo /share/bin-linux/insight/bin/ExpectationMaximizationBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.9.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.9.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.1ext.dat --result BrainWeb.EM.9pn.1ext.dat

/share/bin-linux/insight/bin/ExpectationMaximizationBrainWebValidationApp --images /share/work/data/brainweb/brainweb.T1.1mm.9.0.mhd /share/work/data/brainweb/brainweb.PD.1mm.9.0.mhd --mask /share/work/data/brainweb/phantom_discrete.mhd --parameters /share/work/src/Insight/Validation/StatisticalClustering/Inputs/BrainWeb.params.1ext.dat --result BrainWeb.EM.9pn.1ext.dat