itkhistogramtoimagefilter.h

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/*=========================================================================

  Program:   Insight Segmentation & Registration Toolkit
  Module:    $RCSfile: itkHistogramToImageFilter.h,v $
  Language:  C++
  Date:      $Date: 2007-01-25 09:18:58 $
  Version:   $Revision: 1.9 $

  Copyright (c) Insight Software Consortium. All rights reserved.
  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even 
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
     PURPOSE.  See the above copyright notices for more information.

=========================================================================*/
#ifndef __itkHistogramToImageFilter_h
#define __itkHistogramToImageFilter_h

#include "itkImageSource.h"
#include "itkConceptChecking.h"
#include "itkHistogram.h"
#include "itkImage.h"
#include "itkImageRegionIteratorWithIndex.h"
#include "itkSimpleDataObjectDecorator.h"


namespace itk
{

/** \class HistogramToImageFilter
 *  \brief This class takes a histogram as an input and returns an image of
 *  type specified by the functor. 
 *
 *  The dimension of the image is equal to the size of each measurement
 *  vector of the histogram. The size in the image along each dimension will be 
 *  equal to the number of bins along each dimension of the histogram.
 *
 *  The filter may be used in registration methods to plot the joint histogram
 *  after every iteration. A functor is used since it is customary to plot
 *  p log p    where p is the probability of each measurement vector 
 *  p is given by Number of occurances of the measurement vector / total number 
 *  of occurances of all measurement vectors.
 *
 *  \sa HistogramToProbabilityImageFilter, HistogramToLogProbabilityImageFilter,
 *  HistogramToIntensityImageFilter, HistogramToEntropyImageFilter
 *
 */

template <class THistogram, class TFunction>
class ITK_EXPORT HistogramToImageFilter :
  public ImageSource<Image< typename TFunction::OutputPixelType , 
  ::itk::Statistics::GetHistogramDimension<THistogram>::HistogramDimension> >
{
public:

  /** Standard class typedefs. */
  typedef TFunction                             FunctorType;
  typedef typename FunctorType::OutputPixelType OutputPixelType;
  typedef HistogramToImageFilter                Self;
  typedef ImageSource< Image<OutputPixelType, 
    ::itk::Statistics::GetHistogramDimension<THistogram>::HistogramDimension> >
    Superclass;
  typedef SmartPointer<Self>                   Pointer;
  typedef SmartPointer<const Self>             ConstPointer;
  
  typedef Image<OutputPixelType, 
    ::itk::Statistics::GetHistogramDimension<THistogram>::HistogramDimension >
    OutputImageType; 
  typedef typename Superclass::Pointer    OutputImagePointer;
  typedef typename OutputImageType::SpacingType SpacingType;
  typedef typename OutputImageType::PointType   PointType;

  
  // Define an iterator to iterate through the image
  typedef itk::ImageRegionIteratorWithIndex< Image<OutputPixelType, 
    ::itk::Statistics::GetHistogramDimension<THistogram>::HistogramDimension> >
                                                             ImageIteratorType;

  /** Method for creation through the object factory. */
  itkNewMacro(Self);
  
  /** Run-time type information (and related methods). */
  itkTypeMacro(HistogramToImageFilter,ImageSource);

  /** Superclass typedefs. */
  typedef typename Superclass::OutputImageRegionType OutputImageRegionType;

  /** Some convenient typedefs. */
  typedef THistogram                                     HistogramType;
  typedef typename HistogramType::MeasurementVectorType  MeasurementVectorType;
  typedef typename HistogramType::SizeType               HistogramSizeType;
  typedef typename HistogramType::SizeType               SizeType;

  /** Since histograms are not dataobjects, we use the decorator to push
   *  them down the pipeline */ 
  typedef SimpleDataObjectDecorator< HistogramType* > InputHistogramObjectType;
  
  /** Determine the image dimension. */
  itkStaticConstMacro(ImageDimension, unsigned int,
    ::itk::Statistics::GetHistogramDimension<THistogram>::HistogramDimension );
  
  /** Set/Get the input of this process object.  */
  virtual void SetInput( const HistogramType *histogram);
  virtual void SetInput( const InputHistogramObjectType *inputObject);
  const InputHistogramObjectType* GetInput(void);

                      
  /** Set the spacing (size of a pixel) of the image. 
   *  \sa GetSpacing() */
  itkSetMacro(Spacing,SpacingType);
  virtual void SetSpacing(const double* values);


  /** Get the spacing (size of a pixel) of the image. 
   * For ImageBase and Image, the default data spacing is unity. */
  itkGetConstReferenceMacro(Spacing,SpacingType);

  /** Set the origin of the image. 
   * \sa GetOrigin() */
  itkSetMacro(Origin,PointType);
  virtual void SetOrigin(const double* values);
 
 /** Get the origin of the image.  */
  itkGetConstReferenceMacro(Origin,PointType);

  /** Get the size of the histogram. */
  itkGetMacro(Size,HistogramSizeType);


  /** Set the functor object.  This replaces the current Functor with a
   * copy of the specified Functor. This allows the user to specify a
   * functor that has ivars set differently than the default functor.
   * This method requires an operator!=() be defined on the functor
   * (or the compiler's default implementation of operator!=() being
   * appropriate). */
  void SetFunctor(const FunctorType& functor)
    {
    m_Functor = functor;
    this->Modified();
    }
  /** Get the functor object.  The functor is returned by reference.
   * (Functors do not have to derive from itk::LightObject, so they do
   * not necessarily have a reference count. So we cannot return a
   * SmartPointer.) */
  FunctorType& GetFunctor() { return m_Functor; }
  const FunctorType& GetFunctor() const { return m_Functor; }
  
  void SetTotalFrequency( unsigned long n );
  

  
protected:
  HistogramToImageFilter();
  ~HistogramToImageFilter();

  virtual void GenerateOutputInformation();
  virtual void GenerateData();
  
  FunctorType m_Functor;
  
  SizeType        m_Size;
  SpacingType     m_Spacing;
  PointType       m_Origin;

  
  virtual void PrintSelf(std::ostream& os, Indent indent) const;

private:
  HistogramToImageFilter(const Self&); //purposely not implemented
  void operator=(const Self&); //purposely not implemented


};

} // end namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#include "itkHistogramToImageFilter.txx"
#endif

#endif