cmakelists.txt

DTMK软件开发包,此为开源软件,是一款很好的医学图像开发资源.

ADD_TEST(itkKappaStatisticImageToImageMetricTest ${ALGORITHMS_TESTS2}
  itkKappaStatisticImageToImageMetricTest ${ITK_DATA_ROOT}/Input/Spots.png)
                                                   
ADD_TEST(itkIsolatedWatershedImageFilterTest ${ALGORITHMS_TESTS2}
   --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/IsolatedWatershedImageFilterTest.png
             ${ITK_TEST_OUTPUT_DIR}/IsolatedWatershedImageFilterTest.png
  itkIsolatedWatershedImageFilterTest
             ${ITK_DATA_ROOT}/Input/cthead1.png
             ${ITK_TEST_OUTPUT_DIR}/IsolatedWatershedImageFilterTest.png
             113 84 120 99)

ADD_TEST(itkOtsuThresholdImageFilterTest ${ALGORITHMS_TESTS3}
  --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/OtsuThresholdImageFilterTest.png
            ${ITK_TEST_OUTPUT_DIR}/OtsuThresholdImageFilterTest.png
  itkOtsuThresholdImageFilterTest
            ${ITK_DATA_ROOT}/Input/cthead1.png
            ${ITK_TEST_OUTPUT_DIR}/OtsuThresholdImageFilterTest.png
            64)

ADD_TEST(itkOtsuMultipleThresholdsImageFilterTest ${ALGORITHMS_TESTS2}
  --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/OtsuMultipleThresholdsImageFilterTest.png
            ${ITK_TEST_OUTPUT_DIR}/OtsuMultipleThresholdsImageFilterTest.png
  itkOtsuMultipleThresholdsImageFilterTest
            ${ITK_DATA_ROOT}/Input/peppers.png
            ${ITK_TEST_OUTPUT_DIR}/OtsuMultipleThresholdsImageFilterTest.png
            64 3 2)

ADD_TEST(itkVoronoiPartitioningImageFilterTest1 ${ALGORITHMS_TESTS4}
  --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.png
            ${ITK_TEST_OUTPUT_DIR}/VoronoiPartioningImageFilterTest1.png
  itkVoronoiPartitioningImageFilterTest
            ${ITK_DATA_ROOT}/Input/sf4.png
            ${ITK_TEST_OUTPUT_DIR}/VoronoiPartioningImageFilterTest1.png 1)

ADD_TEST(itkVoronoiPartitioningImageFilterTest2 ${ALGORITHMS_TESTS4}
  --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/VoronoiPartioningImageFilterTest2.png
            ${ITK_TEST_OUTPUT_DIR}/VoronoiPartioningImageFilterTest2.png
  itkVoronoiPartitioningImageFilterTest
            ${ITK_DATA_ROOT}/Input/sf4.png
            ${ITK_TEST_OUTPUT_DIR}/VoronoiPartioningImageFilterTest2.png 0)

ADD_TEST(itkVectorThresholdSegmentationLevelSetImageFilterTest ${ALGORITHMS_TESTS4}
  --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/VectorThresholdSegmentationLevelSetImageFilterTest.png
            ${ITK_TEST_OUTPUT_DIR}/VectorThresholdSegmentationLevelSetImageFilterTest.png
  itkVectorThresholdSegmentationLevelSetImageFilterTest
            ${ITK_DATA_ROOT}/Input/VisibleWomanEyeSliceInitialLevelSet.png
            ${ITK_DATA_ROOT}/Input/VisibleWomanEyeSlice.png
            ${ITK_TEST_OUTPUT_DIR}/VectorThresholdSegmentationLevelSetImageFilterTest.png 
            5.0 50
            )

ADD_TEST(itkSTAPLEImageFilterTest ${ALGORITHMS_TESTS2}
   --compare ${ITK_DATA_ROOT}/Baseline/Algorithms/STAPLEImageFilterTest.mha
             ${ITK_TEST_OUTPUT_DIR}/STAPLEImageFilterTest.mha
   itkSTAPLEImageFilterTest 
             2 ${ITK_TEST_OUTPUT_DIR}/STAPLEImageFilterTest.mha 255 0.5
             ${ITK_DATA_ROOT}/Input/STAPLE1.png
             ${ITK_DATA_ROOT}/Input/STAPLE2.png
             ${ITK_DATA_ROOT}/Input/STAPLE3.png
             ${ITK_DATA_ROOT}/Input/STAPLE4.png
            )   

ENDIF(ITK_DATA_ROOT)

ENDIF( NOT ITK_DISABLE_CXX_TESTING )


IF( NOT ITK_DISABLE_TCL_TESTING )
IF(ITK_CSWIG_TCL)

  ADD_TEST(itkCurvatureFlowTestTcl2 ${ITKWISH_EXECUTABLE}
           ${ITKTesting_SOURCE_DIR}/Code/Algorithms/itkCurvatureFlowTestTcl2.tcl)
  
  ADD_TEST(ImageRegistration3Tcl ${ITKWISH_EXECUTABLE}
           ${ITK_SOURCE_DIR}/Examples/Registration/ImageRegistration3.tcl
           ${ITK_SOURCE_DIR}/Examples/Data/BrainT1SliceBorder20.png
           ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySliceShifted13x17y.png
           ${ITK_TEST_OUTPUT_DIR}/ImageRegistration3TclTest.png )

  ADD_TEST(ImageRegistration4Tcl ${ITKWISH_EXECUTABLE}
           ${ITK_SOURCE_DIR}/Examples/Registration/ImageRegistration4.tcl
           ${ITK_SOURCE_DIR}/Examples/Data/BrainT1SliceBorder20.png
           ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySliceShifted13x17y.png
           ${ITK_TEST_OUTPUT_DIR}/ImageRegistration4TclTest.png )

  ADD_TEST(ImageRegistration5Tcl ${ITKWISH_EXECUTABLE}
           ${ITK_SOURCE_DIR}/Examples/Registration/ImageRegistration5.tcl
           ${ITK_SOURCE_DIR}/Examples/Data/BrainT1SliceBorder20.png
           ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySliceShifted13x17y.png
           ${ITK_TEST_OUTPUT_DIR}/ImageRegistration5TclTest.png )

  ADD_TEST(VoronoiSegmentationTcl ${ITKWISH_EXECUTABLE}
           ${ITK_SOURCE_DIR}/Examples/Segmentation/VoronoiSegmentation.tcl
           ${ITK_SOURCE_DIR}/Examples/Data/BrainT1Slice.png
           ${ITK_SOURCE_DIR}/Examples/Data/VentricleModel.png
           ${ITK_TEST_OUTPUT_DIR}/VoronoiSegmentationTcl.png  0.3 0.3 )

  ADD_TEST(WatershedSegmentation1Tcl ${ITKWISH_EXECUTABLE}
           ${ITK_SOURCE_DIR}/Examples/Segmentation/WatershedSegmentation1.tcl
           ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySlice.png
           ${ITK_TEST_OUTPUT_DIR}/WatershedSegmentation1Tcl.mhd )

ENDIF(ITK_CSWIG_TCL)
ENDIF( NOT ITK_DISABLE_TCL_TESTING )


IF( NOT ITK_DISABLE_PYTHON_TESTING )
IF(ITK_CSWIG_PYTHON)

  ADD_TEST(itkCurvatureFlowTestPython2 ${PYTHON_EXECUTABLE}
           ${ITKTesting_SOURCE_DIR}/Code/Algorithms/itkCurvatureFlowTestPython2.py)

  ADD_TEST(ImageRegistration3Python ${PYTHON_EXECUTABLE}
           ${ITK_SOURCE_DIR}/Examples/Registration/ImageRegistration3.py
           ${ITK_SOURCE_DIR}/Examples/Data/BrainT1SliceBorder20.png
           ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySliceShifted13x17y.png
           ${ITK_TEST_OUTPUT_DIR}/ImageRegistration3PythonTest.png )

  ADD_TEST(ImageRegistration4Python ${PYTHON_EXECUTABLE}
           ${ITK_SOURCE_DIR}/Examples/Registration/ImageRegistration4.py
           ${ITK_SOURCE_DIR}/Examples/Data/BrainT1SliceBorder20.png
           ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySliceShifted13x17y.png
           ${ITK_TEST_OUTPUT_DIR}/ImageRegistration4PythonTest.png )

  ADD_TEST(ImageRegistration5Python ${PYTHON_EXECUTABLE}
           ${ITK_SOURCE_DIR}/Examples/Registration/ImageRegistration5.py
           ${ITK_SOURCE_DIR}/Examples/Data/BrainT1SliceBorder20.png
           ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySliceShifted13x17y.png
           ${ITK_TEST_OUTPUT_DIR}/ImageRegistration5PythonTest.png )
  
  ADD_TEST(VoronoiSegmentationPython ${PYTHON_EXECUTABLE}
           ${ITK_SOURCE_DIR}/Examples/Segmentation/VoronoiSegmentation.py
           ${ITK_SOURCE_DIR}/Examples/Data/BrainT1Slice.png
           ${ITK_SOURCE_DIR}/Examples/Data/VentricleModel.png
           ${ITK_TEST_OUTPUT_DIR}/VoronoiSegmentationPython.png  0.3 0.3 )

  ADD_TEST(WatershedSegmentation1Python ${PYTHON_EXECUTABLE}
           ${ITK_SOURCE_DIR}/Examples/Segmentation/WatershedSegmentation1.py
           ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySlice.png
           ${ITK_TEST_OUTPUT_DIR}/WatershedSegmentation1Python.mhd )

ENDIF(ITK_CSWIG_PYTHON)
ENDIF( NOT ITK_DISABLE_PYTHON_TESTING )


IF( NOT ITK_DISABLE_JAVA_TESTING )
IF(ITK_CSWIG_JAVA AND ITK_BINARY_DIR)
  SET(JAVACLASSPATH ${ITK_BINARY_DIR}/Wrapping/CSwig/Java/InsightToolkit.jar)
  FOREACH(cfgtype ${CMAKE_CONFIGURATION_TYPES})
    SET(JAVACLASSPATH "${JAVACLASSPATH}\\;${ITK_BINARY_DIR}/Wrapping/CSwig/Java/${cfgtype}/InsightToolkit.jar")
  ENDFOREACH(cfgtype)

  FOREACH( javatestfile 
     VoronoiSegmentation
     WatershedSegmentation1
     )

  ADD_CUSTOM_TARGET(${javatestfile}Java ALL  DEPENDS ${ITK_BINARY_DIR}/Examples/Segmentation/${javatestfile}.class)

  ADD_CUSTOM_COMMAND(
    OUTPUT  ${ITK_BINARY_DIR}/Examples/Segmentation/${javatestfile}.class
    DEPENDS ${ITK_SOURCE_DIR}/Examples/Segmentation/${javatestfile}.java
    COMMAND ${JAVA_COMPILE}
    ARGS -classpath "${JAVACLASSPATH}" -d "${ITK_BINARY_DIR}/Examples/Segmentation"
    ${ITK_SOURCE_DIR}/Examples/Segmentation/${javatestfile}.java
    COMMENT "Java Class")

  ENDFOREACH( javatestfile )

  IF(WIN32)
    SET(TMPJAVACLASSPATH ${ITK_BINARY_DIR}/Examples/Segmentation/)
    FOREACH(javadirectory ${JAVACLASSPATH})
      # Set path separator for Windows
      SET(TMPJAVACLASSPATH "${TMPJAVACLASSPATH}\\;${javadirectory}")
    ENDFOREACH(javadirectory)
    SET(JAVACLASSPATH ${TMPJAVACLASSPATH})
  ELSE(WIN32)
    SET(TMPJAVACLASSPATH ${ITK_BINARY_DIR}/Examples/Segmentation/)
    FOREACH(javadirectory ${JAVACLASSPATH})
      # Set path separator for UNIX
      SET(TMPJAVACLASSPATH "${TMPJAVACLASSPATH}:${javadirectory}")
    ENDFOREACH(javadirectory)
    SET(JAVACLASSPATH ${TMPJAVACLASSPATH})
  ENDIF(WIN32)
 
  ADD_TEST(VoronoiSegmentationJava ${JAVA_RUNTIME} -classpath "${JAVACLASSPATH}"
           VoronoiSegmentation
           ${ITK_SOURCE_DIR}/Examples/Data/BrainT1Slice.png
           ${ITK_SOURCE_DIR}/Examples/Data/VentricleModel.png
           ${ITK_TEST_OUTPUT_DIR}/VoronoiSegmentationJava.png  0.3 0.3 )

  ADD_TEST(WatershedSegmentation1Java ${JAVA_RUNTIME} -classpath "${JAVACLASSPATH}"
           WatershedSegmentation1
           ${ITK_SOURCE_DIR}/Examples/Data/BrainProtonDensitySlice.png
           ${ITK_TEST_OUTPUT_DIR}/WatershedSegmentation1Java.mhd  )


ENDIF(ITK_CSWIG_JAVA AND ITK_BINARY_DIR)
ENDIF( NOT ITK_DISABLE_JAVA_TESTING )