📄 acorf.m
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function [AUTOCOV,stderr,lpq,qpval] = acorf(Z,N);% Calculates autocorrelations for multiple data series.% Missing values in Z (NaN) are considered. % Also calculates Ljung-Box Q stats and p-values.%% [AutoCorr,stderr,lpq,qpval] = acorf(Z,N);% If mean should be removed use% [AutoCorr,stderr,lpq,qpval] = acorf(detrend(Z',0)',N);% If trend should be removed use% [AutoCorr,stderr,lpq,qpval] = acorf(detrend(Z')',N);%% INPUT% Z is data series for which autocorrelations are required% each in a row% N maximum lag%% OUTPUT% AutoCorr nr x N matrix of autocorrelations% stderr nr x N matrix of (approx) std errors% lpq nr x M matrix of Ljung-Box Q stats% qpval nr x N matrix of p-values on Q stats% % All input and output parameters are organized in rows, one row % corresponds to one series%% REFERENCES:% S. Haykin "Adaptive Filter Theory" 3ed. Prentice Hall, 1996.% M.B. Priestley "Spectral Analysis and Time Series" Academic Press, 1981. % W.S. Wei "Time Series Analysis" Addison Wesley, 1990.% J.S. Bendat and A.G.Persol "Random Data: Analysis and Measurement procedures", Wiley, 1986.% calculating lpq, stderr, qpval from % suggested by Philip Gray, University of New South Wales, % $Id: acorf.m 5090 2008-06-05 08:12:04Z schloegl $% Copyright (C) 1998-2002,2008 by Alois Schloegl <a.schloegl@ieee.org>%% This program is free software: you can redistribute it and/or modify% it under the terms of the GNU General Public License as published by% the Free Software Foundation, either version 3 of the License, or% (at your option) any later version.%% This program is distributed in the hope that it will be useful,% but WITHOUT ANY WARRANTY; without even the implied warranty of% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the% GNU General Public License for more details.%% You should have received a copy of the GNU General Public License% along with this program. If not, see <http://www.gnu.org/licenses/>.[nr,nc] = size(Z);NC = sum(~isnan(Z),2); % missing valuesAUTOCOV = acovf(Z,N);AUTOCOV = AUTOCOV(:,2:N+1) ./ AUTOCOV(:,ones(1,N));if nargout > 1 stderr = sqrt(1./NC)*ones(1,N); lpq = zeros(nr,N); qpval = zeros(nr,N); cum=zeros(nr,1); for k=1:N, cum = cum+AUTOCOV(:,k).*conj(AUTOCOV(:,k))./(NC-k); lpq(:,k) = NC.*(NC+2).*cum; % Ljung box Q for k lags %qpval(:,k) = 1 - chi2cdf(lpq(:,k),k); % p-value of Q stat qpval(:,k) = 1 - gammainc(lpq(:,k)/2,k/2); % replace chi2cdf by gammainc end;end;
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