📄 ghkss.html
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ghkss
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<h1 align=center>Description of the program: <font color=Blue>ghkss
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This program performs a <a href="../chaospaper/node24.html" tppabs="http://www.mpipks-dresden.mpg.de/~tisean/TISEAN_2.0/docs/chaospaper/node24.html">noise reduction</a>
as proposed in
<a href="../chaospaper/citation.html#on" tppabs="http://www.mpipks-dresden.mpg.de/~tisean/TISEAN_2.0/docs/chaospaper/citation.html#on">Grassberger et al</a>. In principal, it
performs a orthogonal projection onto a q-dimensional manifold using a
special (tricky) metric. In case the -E parameter is set, an euclidean
metric is used. This is done in <a href="../chaospaper/citation.html#cawley" tppabs="http://www.mpipks-dresden.mpg.de/~tisean/TISEAN_2.0/docs/chaospaper/citation.html#cawley">Cawley
et al.</a> as well as in <a href="../chaospaper/citation.html#sauer" tppabs="http://www.mpipks-dresden.mpg.de/~tisean/TISEAN_2.0/docs/chaospaper/citation.html#sauer">Sauer</a>
and is sometimes useful for flow systems.
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<h2 align=center>Usage:</h2>
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<font color=Red>ghkss [Options]</font>
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Everything not being a valid option will be interpreted as a potential datafile name. Given no datafile at all, means read stdin. Also <font color=Red>-</font> means stdin
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Possible options are:
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<table border=2>
<tr>
<th>Option
<th>Description
<th>Default
</tr>
<tr>
<th>-l#
<td>number of points to use
<td>whole file
</tr>
<tr>
<th>-x#
<td>number of lines to be ignored
<td>0
</tr>
<tr>
<th>-c#
<td><a href="../general.html#column" tppabs="http://www.mpipks-dresden.mpg.de/~tisean/TISEAN_2.0/docs/general.html#column">column to be read</a>
<td>1
</tr>
<tr>
<th>-m#
<td>embedding dimension
<td>5
</tr>
<tr>
<th>-d#
<td>delay for the embedding
<td>1
</tr>
<tr>
<th>-q#
<td>dimension of the manifold to project to
<td>3
</tr>
<tr>
<th>-k#
<td>minimal number of neighbours
<td>30
</tr>
<tr>
<th>-r#
<td>minimal size of the neighbourhood
<td>(interval of data)/1000
</tr>
<tr>
<th>-i#
<td>number of iterations
<td>1
</tr>
<tr>
<th>-2
<td>use euclidean metric instead of the tricky one
<td>tricky metric
</tr>
<tr>
<th>-o#
<td><a href="../general.html#outfile" tppabs="http://www.mpipks-dresden.mpg.de/~tisean/TISEAN_2.0/docs/general.html#outfile">output file name</a>
<td>without file name: 'datafile'.opt.n, where n is the iteration<br>
(or stdin.opt.n if data was read from stdin)<br>
without -o the last iteration is <b>also</b> written to stdout
</tr>
<tr>
<th>-V#
<td><a href="../general.html#verbosity" tppabs="http://www.mpipks-dresden.mpg.de/~tisean/TISEAN_2.0/docs/general.html#verbosity">verbosity level</a><br>
0: only panic messages<br>
1: add input/output messages<br>
2: add average correction and trend<br>
4: add how many points were corrected for which epsilon
<td>7
</tr>
<tr>
<th>-h
<td>show these options
<td>none
</tr>
</table>
</center>
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<h2 align=center>Description of the Output:</h2>
Each file produced contains the filtered time series as one
column. The standard error device shows some statistics, namely for each
iteration (i)
the number of vectors corrected up to the actual value of the
neighborhood size, (ii) the average shift and (iii) the average correction.
(iv) The next line shows for how many points the correction was
unreasonably large and the last line shows (v) the file, to which the
corrected data was written.
<hr>
View the <a href="../../source_c/ghkss.c" tppabs="http://www.mpipks-dresden.mpg.de/~tisean/TISEAN_2.0/source_c/ghkss.c"> C-sources</a>.
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See also <a href="../wuppertal/project.html" tppabs="http://www.mpipks-dresden.mpg.de/~tisean/TISEAN_2.0/docs/wuppertal/project.html">project</a>
<hr>
<a href="../contents.html" tppabs="http://www.mpipks-dresden.mpg.de/~tisean/TISEAN_2.0/docs/contents.html">Table of Contents</a> * <a href="../../index.html" tppabs="http://www.mpipks-dresden.mpg.de/~tisean/TISEAN_2.0/index.html" target="_top">TISEAN home</a>
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