📄 search.html

📁 序列对齐 Compare a protein sequence to a protein sequence database or a DNA sequence to a DNA sequenc
💻 HTML
字号:
<html><head><title>FASTA Sequence Comparison Engine</title></head><body bgcolor="white" ><h1 align=center>Search with FASTA</h1><form action="http://fasta.bioch.virginia.edu/fasta/cgi/searchnn.cgi" method=post><b>Choose program and database(s) to query:</b><br><b>Program:</b><select name = "program"> <option> FASTA  <option> FASTX  <option> FASTY <option> FASTF <option> FASTS <option> TFASTX  <option> TFASTY  <option> TFASTF  <option> TFASTS <option> SSEARCH</select><br><br><b>Databases:</b>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<font color="blue">Blue databases</font> and possibly DNA databases can be re-searched<br><table align=center cellspacing=10><tr><td><b>Protein</b><br>  <input type=checkbox name = "libpa" value="a">NBRF Annotated Protein Database (rel. 53)<br>  <input type=checkbox name = "libpp" value="p">NBRF Protein Database (complete)<br>  <input type=checkbox name = "libpd" value="d">NRL_3d structure database<br>  <input type=checkbox name = "libpn" value="n"><font color="blue">NCBI/Blast NR protein database</font><br>  <input type=checkbox name = "libpk" value="k"><font color="blue">NCBI/Blast NR protein database (seg)</font><br>  <input type=checkbox name = "libps" value="q"><font color="blue">NCBI/Blast Swiss-Prot</font><br>  <input type=checkbox name = "libpr" value="r"><font color="blue">NCBI/BLAST Swiss-Prot (seg)</font><br>  <input type=checkbox name = "libpo" value="o">OWL Nonredundant database<br>  <input type=checkbox name = "libpy" value="y">Yeast Proteins<br></td><td><b>DNA</b><br>  <input type=checkbox name = "libnp" value="p">Primate<br>  <input type=checkbox name = "libnr" value="r">Rodent<br>  <input type=checkbox name = "libnm" value="m">Other Mammals<br>   <input type=checkbox name = "libnb" value="b">Vertebrates<br>  <input type=checkbox name = "libnh" value="h">High Throughput Genomics<br>  <input type=checkbox name = "libni" value="i">Invertebrates<br>  <input type=checkbox name = "libnl" value="l">Plants<br>  <input type=checkbox name = "libnt" value="t">Bacteria<br></td><td valign=top><br>  <input type=checkbox name = "libns" value="s">Structural RNA<br>  <input type=checkbox name = "libnv" value="v">Viral<br>  <input type=checkbox name = "libng" value="g">Phage<br>  <input type=checkbox name = "libnz" value="z">Synthetics<br>  <input type=checkbox name = "libne" value="e">EST sequences<br>  <input type=checkbox name = "libnf" value="f"><font color="blue">BLAST human ESTs</A><br>  <input type=checkbox name = "libnc" value="c"><font color="blue">BLAST mouse ESTs</A><br></td></tr></table><p><b>Sequence type:</b><br><input type=radio name="seqtype" value=1 checked>Protein <input type=radio name="seqtype" value=2>DNA (both strands)<input type=radio name="seqtype" value=3>DNA (forward only)<input type=radio name="seqtype" value=4>DNA (rev-comp only)<p><b>Enter query sequence:&nbsp;</b><select name="in_seq"><option>FASTA format<option>Accession/GI number</select>  <b>Subset range:</b><input type=text name="ssr" maxlength=20 size=10></input><table><tr><td><textarea name="sequence" rows=6 cols=60 wrap=hard align=left></textarea><td valign=top><a href="http://www.ncbi.nlm.nih.gov/Entrez/protein.html" target="entrez_window">Entrez protein sequence browser</A><br><br><a href="http://www.ncbi.nlm.nih.gov/Entrez/nucleotide.html" target="entrez_window">Entrez DNA sequence browser</A><br><br><input type=submit name="input" value="Submit Query"></table><br><br><b>Other options:</b><br><table><tr><td><b>Ktup:</b><br><input type=text name="ktup" maxlength=3 size=3></input><td><b>Protein matrix:</b><br><select name = "pmatrix"> <option> Default <option> Blosum50 <option> Blosum62 <option> Blosum80 <option> Pam250 <option> Pam120 <option> MD20 <option> MD10</select><td> <b>DNA matrix:</b><br><select name = "dmatrix"> <option> Default <option> +4/-3 <option> blastn2 <option> +4/-4 <option> +4/-8</select><td>  <b>gap:</b><br><input type=text name="gap" maxlength=4 size=3></input><td>  <b>ext:</b><br><input type=text name="ext" maxlength=4 size=3></input><td><b>misc:</b><br><input type=text name="out_opt" maxlength=10 size=5></input></tr></table><br><b>Output limits:</b><br><b>E():</b><input type=text name="eval" maxlength=6 size=4></input><b>Highest E():</b><input type=text name="etop" maxlength=6 size=4></input><b>scores:</b><input type=text name="best" maxlength=3 size=3></input><b>alignments:</b><input type=text name="align" maxlength=3 size=3></input></form><br><hr><CENTER><a href="http://fasta.bioch.virginia.edu/">FASTA Home</a> | <a href="search.html">Search FASTA</a> | <a href="ftp://ftp.virginia.edu/pub/fasta/"> Get FASTA</a> |  <a href="http://www.people.virginia.edu/~wrp/pearson.html">About the Author </a><hr><br><font size=-1><i><br> Copyright 1988, 1991, 1992, 1993, 1994 1995, 1997, 1999 byWilliam R. Pearson and the University of Virginia.  All rightsreserved. The FASTA program and documentation may not be sold orincorporated into a commercial product, in whole or in part, withoutwritten consent of William R. Pearson and the University of Virginia.</center></body> </frameset></html>
⌨️ 快捷键说明

复制代码 Ctrl + C
搜索代码 Ctrl + F
全屏模式 F11
切换主题 Ctrl + Shift + D
显示快捷键 ?
增大字号 Ctrl + =
减小字号 Ctrl + -