prot_test.lib

序列对齐 Compare a protein sequence to a protein sequence database or a DNA sequence to a DNA sequenc

>HAHU | 1114 | Hemoglobin alpha chain - Human, chimpanzee, and pygmy chimpanzee
VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAV
AHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKY
R 
>K1HUAG | 1091 |  Ig kappa chain V-I region (Ag) - Human
DIQMTQSPSSLSASVGDRVTITCQASQDINHYLNWYQQGPKKAPKILIYDASNLETGVPSRFSGSGFGTD
FTFTISGLQPEDIATYYCQQYDTLPRTFGQGTKLEIKR/ 
>CCHU | 1 | Cytochrome c - Human
MGDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGIIWGEDTLMEYLE
NPKKYIPGTKMIFVGIKKKEERADLIAYLKKATNE 
>N2KF1U | 1021 | Long neurotoxin 1 - Many-banded krait
IVCHTTATIPSSAVTCPPGENLCYRKMWCDAFCSSRGKVVELGCAATCPSKKPYEEVTCCSTDKCNHPPK
RQPG 
>TPHUCS | 1322 | Troponin C, skeletal muscle - Human
DTQQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI
DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKDGDK
NNDGRIDFDEFLKMMEGVQ 
>FEPE | 25 | Ferredoxin - Peptostreptococcus asaccharolyticus
AYVINDSCIACGACKPECPVNIQQGSIYAIDADSCIDCGSCASVCPVGAPNPED 
>RKMDS | 677 | Ribulose-bisphosphate carboxylase (EC 4.1.1.39) small chain - Cry
MRLTQGAFSFLPDLTDEQIVKQIQYAISKNWALNVEWTDDPHPRNAYWDLWGLPLFGIKDPAAVMFEINA
CRKAKPACYVKVNAFDNSRGVESCCLSFIVQRPTSNEPGFQLIRSEVDSRNIRYTIQSYASTRPEGERY*

>K3HU | 1099 | Ig kappa chain C region - Human
/TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSS
TLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC 
>HMIVV | 2581 | Hemagglutinin precursor - Influenza A virus (2 strains)
MKTIIALSYIFCLVFAQDLPGNDNNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICN
NPHRILDGINCTLIDALLGDPHCDGFQNEKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFINE
GFNWTGVTQNGGSSACKRGPDSGFFSRLNWLYKSGSTYPVQNVTMPNNDNSDKLYIWGVHHPSTDKEQTN
LYVQASGKVTVSTKRSQQTIIPNVGSRPWVRGLSSRISIYWTIVKPGDILVINSNGNLIAPRGYFKMRTG
KSSI
MRSDAPIGTCSSECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKQTRGIFGAIAG
FIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQ
DLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEDMGNGCFKIYHKCDNAC
IGSIRNGTYDHDVYRDEALNNRFQIKGVELKSGYKDWILWISFAISCFLLCVVLLGFIMWACQKGNIRCN
ICI 
>OKBO2C | 296 | Protein kinase (EC 2.7.1.37), cAMP-dependent, catalytic chain - B
GNAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYA
MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE
PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEII
LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR
FGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCGKEFSEF
>GT8.7 | 266 | transl. of pa875.con, 19 to 675
MPMILGYWNVRGLTHPIRMLLEYTDSSYDEKR
YTMGDAPDFDRSQWLNEKFKLGLDFPNLPYLI
DGSHKITQSNAILRYLARKHHLDGETEEERIR
ADIVENQVMDTRMQLIMLCYNPDFEKQKPEFL
KTIPEKMKLYSEFLGKRPWFAGDKVTYVDFLA
YDILDQYRMFEPKCLDAFPNLRDFLARFEGLK
KISAYMKSSRYIATPIFSKMAHWSNK