makefile.cray_pvp

序列对齐 Compare a protein sequence to a protein sequence database or a DNA sequence to a DNA sequenc

#
# makefile for fasta35
#
# for more information on FASTA on CRAY's, see:
#
#       http://home.cray.com/~cpsosa/ChemApps/BioInf/fasta/fasta.html
#	provided by: Carlos P. Sosa, [e-mail]
#

CC= cc -h inline1,scalar3,task0,vector2

HFLAGS= -o
NFLAGS= -o

LIB_M=
#

CFLAGS= -DUNIX -DTIMES -DSFCHAR="':'" -DMAX_WORKERS=4
-DTHR_EXIT=pthread_exit -DPROGRESS
-DFASTA_HOST='"crick.med.virginia.edu/fasta/cgi"' -DIS_BIG_ENDIAN

THR_SUBS = pthr_subs
THR_LIBS = -lpthread
THR_CC =

XDIR = /seqprg/slib/bin

# set up files for SSE2/Altivec acceleration
#
include Makefile.sse_alt

# no acceleration
#
DROPGSW_O = $(DROPGSW_SSE2_O)
DROPLAL_O = $(DROPLAL_SSE2_O)

# renamed (fasta35)  programs
include Makefile33.nommap
# conventional (fasta3) names
# include Makefile.common